prot_H-paniculata_contig463.11567.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig463.11567.1
Unique Nameprot_H-paniculata_contig463.11567.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
BLAST of mRNA_H-paniculata_contig463.11567.1 vs. uniprot
Match: D8LHE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE2_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 3.800e-75
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 0
Query:    2 QERGRKRDLYKIRSLLLQGQIAGLRERLKERELDVRELRILTGGRGQSKLRQEIRIQELGAMLKAARTECDALRAREKALAEELTSSQKEGDILRGDLLANQKALADLNVYADSLRSRYTVEMVKLEASLAEMERELTRAEAAHMREXXXXXXXXXSAVAEGERFRNRTILLQGEVLKTRARE 184
            Q RGRKRD+YKIRSLLLQGQIAGLRERLKEREL+V+ELR+LTGGRGQSKLR      ELGAMLK AR ECDALR REK LAEEL  +QKEGD LRGDLLANQKAL+DLNVYADSLRSRYT EMVKLEASLAEMERELTR        XXXXXXXXX AVA+ ER+R+RTILLQGEV+KTRAR+
Sbjct:   65 QARGRKRDMYKIRSLLLQGQIAGLRERLKERELEVKELRVLTGGRGQSKLR------ELGAMLKEARGECDALRTREKVLAEELAMAQKEGDSLRGDLLANQKALSDLNVYADSLRSRYTDEMVKLEASLAEMERELTRXXXXXXXXXXXXXXXXXXAVADQERYRSRTILLQGEVVKTRARD 241          
BLAST of mRNA_H-paniculata_contig463.11567.1 vs. uniprot
Match: A0A6H5KCM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM1_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 6.010e-73
Identity = 158/211 (74.88%), Postives = 172/211 (81.52%), Query Frame = 0
Query:    1 EQERGRKRDLYKIRSLLLQGQIAGLRERLKERELDVRELRILTGGRGQSKLRQEIRIQELGAMLKAARTECDALRAREKALAEELTSSQKEGDILRGDLLANQKALADLNVYADSLRSRYTVEMVKLEASLAEMERELTRAEAAHMREXXXXXXXXXSAVAEGERFRNRTILLQGEVLKTRARETKLRSENARLVATSEAAAAAVDAKTAE 211
            +QERGRKRD+YKIRSLLLQGQIAGLRERLKEREL+V+ELR+LTGGRGQSKLR      ELGAMLK AR ECDALRAREK LAEEL  +QKEGD LRGDLLANQKAL+DLNVYADSLRSRYT EMVKLEASLAEMERELT         XXXXXXXXX      ER+R+RTILLQGEV+KTRARET LR  NA LV  + +A  AV+A  A+
Sbjct:   74 DQERGRKRDMYKIRSLLLQGQIAGLRERLKERELEVKELRVLTGGRGQSKLR------ELGAMLKEARGECDALRAREKNLAEELAMAQKEGDSLRGDLLANQKALSDLNVYADSLRSRYTDEMVKLEASLAEMERELTXXXXXXXXXXXXXXXXXXXXXXXRERYRSRTILLQGEVVKTRARETDLRRANAALVEKATSALEAVEANVAK 278          
BLAST of mRNA_H-paniculata_contig463.11567.1 vs. uniprot
Match: A0A835YWQ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWQ2_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.090e-8
Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 0
Query:   83 EELTSSQKEGDILRGDLLANQKALADLNVYADSLRSRYTVEMVKLEASLAEMERELTRAEAAHMREXXXXXXXXXSAVAEGERFRNRTILLQGEVLKTRARETKLRSENARLVA 196
            EE+ + +++   L+  L A++  + DL+ Y ++LR RYT +MV+LEA++A++E EL   EA H R          S  AE E++R R+ LL+ EV+K R +       N RL A
Sbjct:  155 EEVGALRQQCSELKSALSASRAEVEDLSRYNEALRKRYTDQMVRLEANVADLEIELRALEADHARGRRTWAATEQSLKAEREKYRVRSTLLEAEVVKARQQLDDATELNERLTA 268          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig463.11567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHE2_ECTSI3.800e-7580.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCM1_9PHAE6.010e-7374.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YWQ2_9STRA7.090e-836.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableCOILSCoilCoilcoord: 57..91
NoneNo IPR availableCOILSCoilCoilcoord: 117..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig463contigH-paniculata_contig463:24106..36924 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig463.11567.1mRNA_H-paniculata_contig463.11567.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig463 24106..36924 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig463.11567.1 ID=prot_H-paniculata_contig463.11567.1|Name=mRNA_H-paniculata_contig463.11567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
EQERGRKRDLYKIRSLLLQGQIAGLRERLKERELDVRELRILTGGRGQSK
LRQEIRIQELGAMLKAARTECDALRAREKALAEELTSSQKEGDILRGDLL
ANQKALADLNVYADSLRSRYTVEMVKLEASLAEMERELTRAEAAHMRERR
ELLDREASAVAEGERFRNRTILLQGEVLKTRARETKLRSENARLVATSEA
AAAAVDAKTAE
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