mRNA_H-paniculata_contig4627.11559.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4627.11559.1
Unique NamemRNA_H-paniculata_contig4627.11559.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A6H5L426_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L426_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 3.650e-119
Identity = 203/308 (65.91%), Postives = 238/308 (77.27%), Query Frame = 3
Query:   90 MRTRGELMVLIGTMANSMRACSAFALAARAGLALAS----------RKTSASGITMSAPEAAL----KQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKS-KAQVKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRK-VLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAK 965
            M TRG  + L+G + N++R  S F LAA     +AS          R  S S + MSA EA      ++VLVTGAGGRTGGIVF+KLLA+EGYAT+GM+R+EKSA  LKK  K +V D N+ IAD+  P  LA A++G+E VVLCTSAVPKIYPFSI KV+ +K +LR ++PGRPKFY+ E GTPEEVDW+GAKALIDAAKAAGVKHFVYVGSMGGTQP+NFLNTIGKQEDGTGGDILLWKRKAEEYLIASG+TYTI+HPGGLLD EG KR+LV+  DD +LERK+RSIPRADVAQ      G+D  K
Sbjct:    1 MLTRGRGLALVGVV-NAVRVSSGFFLAAGLATTVASQTGSNHVSNHRTGSCSSVIMSAEEAGAPSTARRVLVTGAGGRTGGIVFEKLLAKEGYATKGMVRTEKSANNLKKKCKVEVLDSNIAIADLATPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMILRSEDPGRPKFYWCENGTPEEVDWLGAKALIDAAKAAGVKHFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILLWKRKAEEYLIASGMTYTIIHPGGLLDKEGGKRQLVLDTDDKMLERKSRSIPRADVAQAVAT--GIDGVK 305          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A4D9D9A5_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A5_9STRA)

HSP 1 Score: 301 bits (771), Expect = 1.400e-94
Identity = 166/303 (54.79%), Postives = 218/303 (71.95%), Query Frame = 3
Query:  180 GLALASRKTSASGITMSAPEAALKQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQVKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKVLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLI----ASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVTTDFRAFVEGFSGNTDYTKSP 1076
            G  LA+   +  G TMS  ++  K VLVTGAGGRTG +VF KL A+  +   G++RS+KSA KL+K+ A   D+ +VI DV DPA+L+ A++G + ++LCTSA PKI  FSI+K+L +K+LR + PGRP+F F   G PEEVDW+GAK  +DAA AAGVKHFV++GSMGGTQP+NFLN+IGK+ DG+GGDILLWKRKAE+YLI    + G++YTIVHPGGLLD  G ++ LV  VDD LL+R  RSIPR DVA++CV+ L    AKN + DV +++ G G  TTDF A  +     +   +SP
Sbjct:   29 GYMLATSSGTCQGPTMSLGDSPRK-VLVTGAGGRTGTLVFQKLQAKTDFQPIGLVRSKKSASKLRKA-AGATDEQIVIGDVMDPATLSKALEGCDSLILCTSATPKILLFSIIKILFKKLLR-RAPGRPEFKFPPRGEPEEVDWLGAKNQVDAAIAAGVKHFVFLGSMGGTQPDNFLNSIGKRPDGSGGDILLWKRKAEKYLIQQANSHGMSYTIVHPGGLLDKPGGQQELVFDVDDVLLQRTTRSIPREDVAEVCVQALLQPKAKNVALDVIAEAVGTGTPTTDFSALFDSLQNRSCAYESP 328          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A7S3XVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVK4_HETAK)

HSP 1 Score: 292 bits (747), Expect = 1.360e-91
Identity = 158/276 (57.25%), Postives = 195/276 (70.65%), Query Frame = 3
Query:  252 QVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQVKDDN--VVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKV---LRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVTTDFRAFVEGFSGNTDY 1064
            +VLVTGAGG+TGG+VF  LL +EG+   GM+R  KSA KLKK        N  +V  D++DPASL  AMQG + +V+ TSAVPKI P SI KVL  K    L    PGRP+F +   G PE VDWIG K  ID AK   +K  V V SMGG+Q +NFLNTIGK+EDGTGGDILLWKRKAE+YLI SG+ YTI+HPGGL+D +G KR +V+ +DD LL+R+ RSIPRADVA++CV+ L    A NRS D+ ++ EGEG VTT+F A  +G  GN +Y
Sbjct:    4 KVLVTGAGGKTGGLVFKNLLEKEGFEAVGMVRGGKSANKLKKVVGGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLPPGRPEFKWEPNGQPELVDWIGQKNQIDLAKKLKLKQVVVVSSMGGSQADNFLNTIGKKEDGTGGDILLWKRKAEKYLIDSGVKYTIIHPGGLIDKDGGKREIVMDIDDKLLKREKRSIPRADVAEVCVQSLLCKSAINRSIDICTNEEGEGAVTTNFDALFKGTKGNCNY 279          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A7S0ESZ0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ESZ0_9EUKA)

HSP 1 Score: 290 bits (743), Expect = 6.170e-91
Identity = 160/262 (61.07%), Postives = 193/262 (73.66%), Query Frame = 3
Query:  234 PEAALKQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQVKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRK-VLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVT 1016
            P +ALK VLVTGAGGRTG +VF++L      +  G++RS K+A+ L+K+ A    D +V  DVTD   LA AM G + VVLCTSAVP+I P SIVK+L +K VLR  EPGRP+F F  GGTPEEVDW+GAK  IDAAKAAGVK FV+V SMGGTQP+NFLN+IGK+ DG GGDILLWKRKAE YL+ASGL Y+I+HPGGL+D  G  R L +GV D LL+ + R +PRADVA++C   L    A   SFD+AS  EGEGE T
Sbjct:   23 PASALK-VLVTGAGGRTGRLVFEQLQQDASMSPVGLVRSRKAAKALRKAGAA--GDEIVKGDVTDATVLAGAMAGCDSVVLCTSAVPQIKPLSIVKLLFKKTVLRRAEPGRPQFRFTPGGTPEEVDWLGAKMQIDAAKAAGVKRFVFVSSMGGTQPDNFLNSIGKRADGAGGDILLWKRKAERYLVASGLEYSIIHPGGLVDGPGAARELRVGVGDALLQEEFRQVPRADVARVCCAALIAPEAAKVSFDLASRPEGEGEPT 281          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A7S3JVE2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVE2_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.070e-90
Identity = 156/259 (60.23%), Postives = 199/259 (76.83%), Query Frame = 3
Query:  252 QVLVTGAGGRTGGIVFDKLLAR-EGYATRGMLRSEKSAQKL-KKSK-AQVKDDNVVIADVT-DPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKVLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVT 1016
            +V+VTGAGGRTG +VF++L    E     G++RS KS   L KK K + + +  ++ ADVT    SL  AM G + ++LCTSAVPKI P+SIVKV+ +K+LR ++ GRP+F F E GTPEEVDW+GAKA I+AAKAAGVKHFV+V SMGGTQP+NFLNTIGK  DGTGGDILLWKRKAE++L+ SGL YTI+HPGGL+D E  KR +V+G+DD LL+ K+RSIPRADVA++C   L  + AKN+SFD+A+   GEG+ T
Sbjct:   18 KVMVTGAGGRTGKLVFEQLSNDYEDVEPLGLVRSAKSKNALLKKMKDSDLDETKIITADVTAKDKSLEAAMSGCDAIILCTSAVPKIKPWSIVKVMFKKLLRKEDVGRPEFSFPENGTPEEVDWLGAKAQIEAAKAAGVKHFVFVSSMGGTQPDNFLNTIGKVSDGTGGDILLWKRKAEKFLVESGLDYTIIHPGGLIDEEPAKREIVVGLDDVLLKLKSRSIPRADVARVCCAALFDERAKNKSFDIATKPIGEGKPT 276          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A835YZL1_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL1_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.580e-89
Identity = 156/282 (55.32%), Postives = 196/282 (69.50%), Query Frame = 3
Query:  252 QVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQ--VKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLV---RKVLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERK-ARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVTTDFRAFVEGFSGNTDYTKSPQ 1079
            +V+VTGAGG+TG +VF KLL R GY   G++R+EKSA+KL+K           + + +V D A+L   M G + VVLC+SA PKI   S++ VL+   RK+LR   P RP F F  GG PE+VDW+GAK  +D+AK A VK FV+V SMGGTQP+NFLNTIG+++DGTGGDILLWKRKAEEYLI SG+ YTI+HPGGLLD  G KR L++G DD  L  +  RS+PR DVA++CV+ L LD A NRS D+ S  EGEG VTTDF        G  +YT  P+
Sbjct:    4 KVVVTGAGGKTGSLVFKKLLERPGYEPVGLVRTEKSAKKLRKFLGADLAPSAQIALGNVNDAAALDGVMAGADAVVLCSSATPKIRLLSLLLVLLNPLRKLLRLA-PARPSFTFGGGGIPEKVDWLGAKEQVDSAKRACVKKFVFVSSMGGTQPDNFLNTIGRKKDGTGGDILLWKRKAEEYLIESGVPYTILHPGGLLDQPGGKRELLLGKDDAFLATQDTRSVPREDVAEVCVQALSLDEATNRSLDLVSRKEGEGAVTTDFAELFRSVEGTCNYTAMPR 284          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: F0Y6P5_AURAN (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P5_AURAN)

HSP 1 Score: 282 bits (722), Expect = 4.670e-88
Identity = 159/272 (58.46%), Postives = 192/272 (70.59%), Query Frame = 3
Query:  240 AALKQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQVKD-DNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKVLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVTTDFRAFVEGFSG 1052
            AALK+VLVTGAGGRTG +VF KL  ++ YA    L   +SA+            D VV ADV D A+LA AM G + VVLCTSAVP I   S+VK++V+K+LR  + GRP+F F  GGTPEEVDW+GA+  IDAAKAAGV HFV+V SMGGTQPENFLNTIGKQ+DG+GGDILLWKRKAE YL+ SG+ +TIVHPGGL+D E  KR L + VDD LL  K+RS+ RADVA++C   L  D A  +SFD+AS   GEG  T    +  E  +G
Sbjct:    2 AALKKVLVTGAGGRTGKLVFKKL--KDDYADVAPLGLARSAKXXXXXXXXXXXXDEVVAADVADEAALAEAMAGCDAVVLCTSAVPAIRKRSLVKLMVKKLLRRPDVGRPEFSFPPGGTPEEVDWLGARKQIDAAKAAGVSHFVFVSSMGGTQPENFLNTIGKQDDGSGGDILLWKRKAERYLVDSGVPFTIVHPGGLVDEEPGKRELTVEVDDVLLGLKSRSVARADVARVCCAALFDDAALGKSFDLASKPVGEGTPTLHAASVFEALAG 271          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A7S4IF81_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IF81_9EUKA)

HSP 1 Score: 273 bits (699), Expect = 4.520e-85
Identity = 145/235 (61.70%), Postives = 172/235 (73.19%), Query Frame = 3
Query:  396 DDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRK-VLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVTTDFRAFVEGFSGNT-DY-TKSPQAPSM 1091
            DD +V AD T    L  AM G   VVLCTSAVPKI P SI+K+LV+K +LR K+PGRP F F  GGTPEE+DWIGAK  +DAAKAAGVKHFV+V SMGGTQPENFLN+IG+Q DG+GGDILLWKRKAE YLI SGL YTIVHPGGL+D    +  LV+ VDD LLERK+R +PRADVA++C   L    A+N+SFD+AS ++GEGE T +     E     + DY T  P  PS+
Sbjct:    4 DDEIVRADATRFEELTAAMDGCGGVVLCTSAVPKIRPLSILKLLVKKSILRSKDPGRPLFRFVSGGTPEEIDWIGAKLQVDAAKAAGVKHFVFVSSMGGTQPENFLNSIGRQRDGSGGDILLWKRKAERYLIESGLRYTIVHPGGLVDEPATEGALVVDVDDKLLERKSRQVPRADVARVCCAALREPAARNKSFDLASSAKGEGEPTVEAGTVFEQLGERSCDYSTVLPDPPSI 238          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: R1FLD3_EMIHU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLD3_EMIHU)

HSP 1 Score: 275 bits (704), Expect = 4.520e-85
Identity = 155/269 (57.62%), Postives = 190/269 (70.63%), Query Frame = 3
Query:  219 ITMSAPEAALKQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQVKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKVLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQ---EDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVT 1016
            + +++  +ALK VLVTGAGGRTG +VF +L     +A  G++RS+K+ + L+K      D  +V ADVTD A+LA AM G + VVLCTSAVP+I PFSI K           PGRPKF F  GGTPEEVDW+GAK  IDAAKAAGVK FV+V SMGGTQP+NFLN+IG++   EDG+GGDILLWKRKAE YLI+SGL YTI+HPGGL+D     R L +GVDD LL +  R +PRADVA++C   L    A + S D+AS  EGEG VT
Sbjct:    7 LLVASSSSALK-VLVTGAGGRTGKLVFQQLKESASFAPVGLVRSKKAVKALRKV-GGADDAEIVRADVTDGAALAAAMAGCDSVVLCTSAVPQILPFSIAK-----------PGRPKFKFAPGGTPEEVDWLGAKLQIDAAKAAGVKRFVFVSSMGGTQPDNFLNSIGERKSDEDGSGGDILLWKRKAERYLISSGLEYTIIHPGGLVDKPAGARELTVGVDDELLGQAFRQVPRADVARVCCAALTEPAAADLSLDLASRPEGEGAVT 262          
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Match: A0A7S4A772_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A772_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.900e-84
Identity = 146/266 (54.89%), Postives = 184/266 (69.17%), Query Frame = 3
Query:  243 ALKQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQVKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKVLRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGGTQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDAEGRKRRLVIGVDDTLLERK------ARSIPRADVAQLCVECLGLDVAKNRSFDVASDSEGEGEVTTD 1022
            ALK+VLVTGAGGRTG +VF++L A   Y   G+ RS K+ + LK   A   DD V +AD+ D  SLA AM G + VVLCTSAVP I P S++K +  KVL F +  RP F F + GTPEEVDW GAK  IDAAK AGVK FV+V SMGGT P+NFLN+IG+++DG+GGDILLWKRKAE YL+ SG+ YTI+HPGGL+D +G KR LV+GV+D +++         RS+ RADVA++C   LG   A   + D+ S   G+G  T D
Sbjct:   15 ALKKVLVTGAGGRTGKLVFEQLKADSNYKPVGLARSGKAQKALKAVGAS--DDEVCVADIADEKSLAAAMAGCDAVVLCTSAVPAIKPLSLMKTMATKVLPFVKTSRPAFKFPKNGTPEEVDWFGAKKQIDAAKTAGVKQFVFVSSMGGTNPDNFLNSIGRRKDGSGGDILLWKRKAERYLVESGVPYTIIHPGGLVDEDGSKRELVVGVNDEIMKNPEFSSGGTRSVARADVARVCKAALGSASATGVALDLVSKKAGDGTPTKD 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4627.11559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L426_9PHAE3.650e-11965.91NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
A0A4D9D9A5_9STRA1.400e-9454.79NAD(P)-bd_dom domain-containing protein n=2 Tax=Mo... [more]
A0A7S3XVK4_HETAK1.360e-9157.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0ESZ0_9EUKA6.170e-9161.07Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S3JVE2_9STRA2.070e-9060.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YZL1_9STRA1.580e-8955.32NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
F0Y6P5_AURAN4.670e-8858.46NAD(P)-bd_dom domain-containing protein (Fragment)... [more]
A0A7S4IF81_9EUKA4.520e-8561.70Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
R1FLD3_EMIHU4.520e-8557.62NAD(P)-bd_dom domain-containing protein n=1 Tax=Em... [more]
A0A7S4A772_9STRA4.900e-8454.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4627contigH-paniculata_contig4627:37..14128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue5.8e-74
Seed eggNOG ortholog44056.XP_009035991.1
Hectar predicted targeting categorysignal peptide
GOsGO:0001101,GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0006950,GO:0006952,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009737,GO:0010033,GO:0016020,GO:0031090,GO:0033993,GO:0042221,GO:0042742,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0051704,GO:0051707,GO:0071944,GO:0097305,GO:0098542,GO:0098588,GO:0098805,GO:1901700
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-20_002130.1
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1720
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4627.11559.1prot_H-paniculata_contig4627.11559.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4627 660..14039 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930382.2367928-UTR-H-paniculata_contig4627:36..6591622930382.2367928-UTR-H-paniculata_contig4627:36..659Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4627 37..659 -
1691481266.4222684-UTR-H-paniculata_contig4627:36..6591691481266.4222684-UTR-H-paniculata_contig4627:36..659Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4627 37..659 -
1622930382.3943882-UTR-H-paniculata_contig4627:14039..141281622930382.3943882-UTR-H-paniculata_contig4627:14039..14128Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4627 14040..14128 -
1691481266.519379-UTR-H-paniculata_contig4627:14039..141281691481266.519379-UTR-H-paniculata_contig4627:14039..14128Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4627 14040..14128 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930382.2564394-CDS-H-paniculata_contig4627:659..7521622930382.2564394-CDS-H-paniculata_contig4627:659..752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 660..752 -
1691481266.4367235-CDS-H-paniculata_contig4627:659..7521691481266.4367235-CDS-H-paniculata_contig4627:659..752Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 660..752 -
1622930382.2748244-CDS-H-paniculata_contig4627:1357..14321622930382.2748244-CDS-H-paniculata_contig4627:1357..1432Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 1358..1432 -
1691481266.4468176-CDS-H-paniculata_contig4627:1357..14321691481266.4468176-CDS-H-paniculata_contig4627:1357..1432Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 1358..1432 -
1622930382.2884052-CDS-H-paniculata_contig4627:2297..24601622930382.2884052-CDS-H-paniculata_contig4627:2297..2460Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 2298..2460 -
1691481266.4565845-CDS-H-paniculata_contig4627:2297..24601691481266.4565845-CDS-H-paniculata_contig4627:2297..2460Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 2298..2460 -
1622930382.3032556-CDS-H-paniculata_contig4627:4076..42401622930382.3032556-CDS-H-paniculata_contig4627:4076..4240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 4077..4240 -
1691481266.4668016-CDS-H-paniculata_contig4627:4076..42401691481266.4668016-CDS-H-paniculata_contig4627:4076..4240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 4077..4240 -
1622930382.3210957-CDS-H-paniculata_contig4627:5862..59671622930382.3210957-CDS-H-paniculata_contig4627:5862..5967Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 5863..5967 -
1691481266.4755332-CDS-H-paniculata_contig4627:5862..59671691481266.4755332-CDS-H-paniculata_contig4627:5862..5967Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 5863..5967 -
1622930382.3372867-CDS-H-paniculata_contig4627:11512..116531622930382.3372867-CDS-H-paniculata_contig4627:11512..11653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 11513..11653 -
1691481266.484585-CDS-H-paniculata_contig4627:11512..116531691481266.484585-CDS-H-paniculata_contig4627:11512..11653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 11513..11653 -
1622930382.3526824-CDS-H-paniculata_contig4627:12354..125111622930382.3526824-CDS-H-paniculata_contig4627:12354..12511Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 12355..12511 -
1691481266.4974692-CDS-H-paniculata_contig4627:12354..125111691481266.4974692-CDS-H-paniculata_contig4627:12354..12511Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 12355..12511 -
1622930382.375752-CDS-H-paniculata_contig4627:13929..140391622930382.375752-CDS-H-paniculata_contig4627:13929..14039Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 13930..14039 -
1691481266.509707-CDS-H-paniculata_contig4627:13929..140391691481266.509707-CDS-H-paniculata_contig4627:13929..14039Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4627 13930..14039 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4627.11559.1

>prot_H-paniculata_contig4627.11559.1 ID=prot_H-paniculata_contig4627.11559.1|Name=mRNA_H-paniculata_contig4627.11559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
MRTRGELMVLIGTMANSMRACSAFALAARAGLALASRKTSASGITMSAPE
AALKQVLVTGAGGRTGGIVFDKLLAREGYATRGMLRSEKSAQKLKKSKAQ
VKDDNVVIADVTDPASLAVAMQGIEEVVLCTSAVPKIYPFSIVKVLVRKV
LRFKEPGRPKFYFREGGTPEEVDWIGAKALIDAAKAAGVKHFVYVGSMGG
TQPENFLNTIGKQEDGTGGDILLWKRKAEEYLIASGLTYTIVHPGGLLDA
EGRKRRLVIGVDDTLLERKARSIPRADVAQLCVECLGLDVAKNRSFDVAS
DSEGEGEVTTDFRAFVEGFSGNTDYTKSPQAPSMS*
back to top

mRNA from alignment at H-paniculata_contig4627:37..14128-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4627.11559.1 ID=mRNA_H-paniculata_contig4627.11559.1|Name=mRNA_H-paniculata_contig4627.11559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14092bp|location=Sequence derived from alignment at H-paniculata_contig4627:37..14128- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TATCCTCAAAAGTTCAAGCTAACAGAGTTCTCACATTTCATCCACAGAAT CAAAAGATCCTTGTCTGGCGAGCCGCGTGCTTGTATACTATGCGAACACG TGGGGAGTTAATGGTATTGATTGGCACCATGGCCAACTCTATGCGTGCGT GTTCAGCGTTTGCCCTGGCAGCCAGAGCAGGACTGGCGTTGGCAAGCAGG TGACTGTTAAGCAGGCGACACATGAACCCAGCACAGTCAGTACTCGTGTA CATACATAATCAGGGCTGTATATGAGGGATCACTGTTGTGCCTGTGTGAC TCTAGCCATGTAGCTCAGCTGAGTTAAATTAATATGTTTTGAACGAAAAA AGGAGGCAGCGTTGTGTTTTACGTACCATGTCATGGCTGAAATTTTGGAC GCTGTAGCAGAATTGGATACCCCCAAATGAGTCACAATCGTGATATGAAC AACAGTTTGTAGCTACTAAATGTCATGTTGATATCATGTTTACAGATGGT GTGTCCATAAAAATCAGTACCGGCGATCGGTATGTAAGTAGGTGCATGTA GTGTATATGCGTTATCTCCTCTCTCCCGTCGTTCAAAGGACGCATACACC CGTACTGTTGTGGTCATTTCAACTCAGACTCTAGAAAAGTTGGGGAAGTG ATTGCGATTATTGTCATGTGTGCACATGATTTTTGGGTCGCTACGTGGTA TCGGAAAAGTCAACAGCTATGGCACAATCCCCCGCAGTTTTTGCTGACCA ACTTGTTGTATAAGTACATGTGATGTCTTTGAATAGGCTCTGGAATAGAG GATTAATTTTTTAAGTCGAGTCTCAAGCGTAGATATTGAGTGCACACCTA TGCATATATTTGACCTTGGCCTCGGTTGTAGGCGTATGGGTTAGGGGGGG GGGATGAAAATACTCCATTTTGATATGAATAATTCTAGATTACTACAAAT TATATCACATGATATCAATTACCATAAAGCAACTCCATATTGCCAACCAA AAATACCCATAAATGCAAAGTTGCTAGATAGCGTGTAGGCTGACCCTATT GTTCAAGATAGGTGTGTGCTTGGCCAGGAGTGCTACACGCAAATGATCCA CAAACTGGCCAAATTCGGGAGGCTATGTAGATGATTTCAGTTGTATACAC TTATCAGCAAATTTTAATCAACATGGAACATGGTTTTACACTAAGGGGAC ACGTGGCATGCCTCTTTGTGTGCCAACGAGCGTGGGGGTGAATGGGCCGT GACACTGAATACGTCTCGTAGCAACGACCTCCCTTTGAGGGAATATATCT ATGTTGAGGACGTGTATCTATGTTCAATAAATTACTATCGACATGATAGA TACATACCATGGTATGGCGGTAGCTTGCGTGACCTCAGCATGTACGTTTA GATAGGTGACCAAGACGAAACGATTGAAATGAAGCAATGCGGCTTTGCCA GTTACTTGTAGATTCAACAGCACAGTACCAGGATATGTGCTCTATGCTCG TTATACACGTGAGTGGGATAGTTGCGATTATGCTGTACTCCCTGGTAGAT GGACCCCCCTCCCATCTCCTTCGTGTCCCCTTTCTCCGCATCATCCATGT CTCACACTCAAAAAAAGGAAAACAAGCGCTAGCGGTATAACTATGTCCGC ACCAGAAGCAGCCCTGAAGCAAGTTCTCGTCACTGGTGCGGGCGGCCGCA CTGGAGGCATTGTGTTTGACAAGCTCTTGGCGAGGGAGGGCTACGCGACG CGTGGGATGCTCCGCAGTGAAAAGGCGAGAGGGACAAGATTACTCTGCTC TACTCTGTTTCTCTACTGCACTTGAATTTGCGGTAGCTAGCTACTGGACA ATTTTCTCCAACCTCGCGTTATTTTTTGTTTCTTCTTTAAAATCACGCTG CGTCATTATGCAGGGACACTTGGCGATCCCGAATAATGCATATTCTTGTA TCATCGGGAATGCCTCGTCGAGAAGACGTGCCGCAGATGTTGGCATGGTT ATTTTGGGCGAGGCTCTATGACAGCGCATATTTTTTAGCTAGGAATCGAG TTCGAATATATTTCACTCGGGCGGGGCGTTAATACATTGTTAATTGGCGG TGTTAGAAACGAAAATAGACGGGGTTGGCGTGGGGTATCTGCTTTTGCCA CGTGTTCGCGCCAACTTGCTCTTCGCACGAGTAATTGTGTTATGCGACCT CATGCGAGTTATCATCACGTGGACATGGAGAAAATCATTGGTGTTATAAA CTGATGGCTAGCTTTTTATGAGTATTTGTTGAGACGTGCGAAATGATGCT TGGGTTGGGAAACAGAGCACCGAGTACTTGCAATTTTATGCCATTGCAAT CAATCCCAGCAAGAGGTGGCGTCCATATCTACCTTCATGTCTTGCACATA TGTCCAGTTCTGTTCTGATGGTGCTTTCCTCCTGCCGTGATTCGCTTTTT TTCGGGGGGTGGGTTTCTTCGACAGAGTGCGCAGAAGCTGAAAAAGAGCA AGGCACAAGTGAAAGACGATAACGTCGTTATCGCTGACGTCACGGACCCC GCAAGCTTGGCGGTGGCCATGCAGGGAATCGAGGAGGTTGTGCTGTGCAC CAGCGCTGTTCCCAAGGTGGGGGTGCCGACTCGCTACGCGTGGGTAGTGA GGCCTGCCTCCGGTAACGGCAGCAAGTATGATAGTGCAGCATGTTTTTTG TATGCAACTGTCTTTTTTTTTCCTGGGCTCTGCCTTAGTGTTCGTTGATT TTCCTGTCTCGCAAAAGGTATATTGTTTATGCTTCAGATAAAGAATGTGC TTGGAAATAGGCAGCAGTCGTTATTGCTCAGCATGCTGCATCTCACGCGC TGCCCCCCAACCCCCCGGATTTTGTTCAATCTGTCGGGTTGTAATCCAGG AGCCTGAAGATGTTGGGCGTACCTCCATGTGTTTTACAGTTATTGTCATG TTTTATACAGCAATTCATGAATATCTGCTTATATATTTGTCTTACTCTCT ACTATATGGTACTCTGTCCAAACCACATTCTCATATTGTAGACACTGTCC TCCTGGTGAAGCTGTCCTCGACAAGTGTTGCGTGTGGTAATGTAGCTATG TTGTAATTGATGGTGGATCTCTATTTCTTGCATGAAGTGCATTATAGGCC ATCCCGTCACTCCTCCATGTTATTGCTACGAATTATCACATCCAATTGAT GTATTCACTTCCATGTAGCAGTGGCGGCGGCGGGATCACAGTGTAAGCGA GAGGGGAGCAAGCACTTGTTCCTTTCCAGCATTCCTAGCCATGTGGATAC TATTCTTCAACAATAGCGCCGGCCTGCACGCTACTTAGCAACTTTATACT TGTGATATTATTTTCCATAATATTGTGATACACATGAACAAGACTATCTG TGTTCCCCATCTTGATATTGTGCTGCTCATCTTGTATCGCCATTTGGATA TTCAGTGTGTGTTCTCACCCGTCAAATATTCATCAGGAGGGAACATATAC GTGTAGTTGTCTGTTTTTTTTCATTAGAATTTAATGATTTGGGCCTGGAG CATTGATCTTGCTTCCCCACATATTTGTTCGTATCACTTCTATCTGTATG CCCCCCCCCCCCCGTCAATTATGAGAGGGGAATGCAGTGTAATCGATTAT TTCTAGGCTCCTAGAGCCTAATGATGTCTGAACGCGCAAAGACGATCTTG TATGACGTTTTTATTGCGGGGAGAGTAGACGCGAGTGAGCATGCGGACCT CCACCCTCCAGAAACCAAGGTGACTGCAGCCAGCAACTTGGCCGAACCAA ATATAGACAGAATCGAACTAGACCAACAAGAACCAAGATCAGAGTAACTG CCAAATCAATTCCCATAACGCCCATGCATGACATTCCAGCACAGCATCAC AGCAGTCGATCTCTCACCCAATCCTCTATCCCAGAGGAGGGAACAGTACT GACGATCGAATACCCTCCCTTGTTATCCGCATCTGATGAAGATAGATGAA AAAAAACAAGGCTAGCACCCACAATAATCAACAAGCACCGAGGGAAAAGC CCGGGGGCCGGGCAAAAACACCTCCATAATACGGCGCCTAACAAACACGG ACCAAGACAGTGGCGAATCTGGACAACCTACCCAAAACCTATGCCCGCTA ATAGCGTAGGGTGCTAGCTGAACCAATTTCCGACTGCTTTACGTAATCGT TGTCCGTAAAAATCGGCGCGAAGTTCGTTGGGACAAATTGTTCGAATTTT GACGATGATCTCTTGAAATCCGTGAAGGAAGAGCTTTCGGGAGGATATCA GCGTGCTATCTTTTGAATCGACATGATACATCGACACCTTCCTAGTCCTC ACGAGATCACGAATAAAACGGTATCTTACATCGATATGCCTACTCCGGCT GGAGCTGCGCGGGTTCTCAGCCAAAGAATGCGCCTCAGCGTTGTCCTCGA ACAACCTAATACGGATACCGTACAATACTGGTTGCAAGAAAGTAAGCACA ACTTTCACATAAGAGCCCTGCTTAGCTCCCACCCCAAGAGCCACGTATTC CGCCTCGGTGTCGAAACAGTTAAGCTGACCGCTACGCCTCCCAACATTAC AGTCACCCCAGACACATAACGCCTGCCTAAAGATTTCTCCGCGAAATCAG CATCAGCGTAAACGTCCAGCTCCAGCCCCGACCCCCGCACAAAGGTTAGT GCCAAAGATCTATTCTTTTTGAGATACGAAAGAATTTTCAGAACCCTAGC CCAGTGACGCCCGCAAGGGTTGTGGGAATGTCAGGTCACAGCTCGCAAAG CATTTGCGATATCCGGGCGAGCCATCGTAGCTAGCCAGAGAAGGTACCCA ACTGCCGCCCTGAAATGCCAGTCTTCACCTTCTTCATCTTCACAGCGCGG ACCTAGGTCAGCAAGTGAGGTCGAGGGAAGTTAAGACATGGAGGTGATTT CGAACCGCTCCATGAGGCTGTCGACAAGAATAGTTTGATCCATCGTGAAT GTACCCTTTCTCCAATCCCGATTGAATGCATATCCGGTGTACGAGATCCA TTCCCCTTGATTGGTAATGGATTTTTTTCCCGAGAGCGCATCGAAAAACC TGTTGTAATCACCCTCCTTACCCTCCACAACCATGTCATTCACATATATT GACAGGATCAAGGTAACCTTGTCGTCGATCATCTCACGAAATACGCAGGG TTCAGCCGTGCCTTGTTCCATCCCGAAATCCACCGGCTCGTCCACCAAAC GTGTATTCCGCTGCTTGCCGGCCTGTTTCAGACCATACAGAGCCCTGTCT AGTTTTACAGTCCTCTCCGACCTTGAAACACATGCAGCAGAAAGTCTCGT GAAAAAAATATGATCCAATCCTGCTTGAACAATGAAACAGTTGTAGATTC TCCTGCTCCCCTATGGCTAACGCCGTCTTGACGGCAGTGGCGGAAAGGGT AGGCGCAAAAGCCTCATCAGAATCTACGTCTTGGATTTGTGTCCGTTTGT CGGCTACCAACCTGGCCTTGAATTTCAGCATATCCCCTATCTAAGTTTGT TTGTACGGCAGAATGAACTACCCCCTCAGCGGTTTCTTCCCTTCCCTTCG CCGAGTAAAAGTCCTCGTCTCAGCATGGCCTCCCATTTCTCTCTTGATCG CCTCCCAAAACGGATGATATTTGGACCGTCTCACACCATCTATGTTACGA GGTACAGGCTCCGCGTCTCAACGGAAAAGGCTCAAAACCCAACTCCCCTG TCACCAGAAAAGCAGCCTCGTCCTCTAAGATGTCGGACACCTTGAACTAT AGCTCCAGTCCAGCATCCTCAGCGAGCAAAGCTCGCGCCTCTCCTTCCTG TATCCTCCTCTATTCCTCTCTTGTTCACCCCTGCCGGATTGGATCAGGCG CCGGTAAGTTAAAAGCCTCAAGGTGGTGCGCCTCTCTACCCGTGAGGGCA GGAGGGGGACCCTCCCCAGAGAGGAGGGGGACCCTCCCCAGAACCCGCAC TATTGTCGATCCTGTCTGGTGTACTTGTAGACGACGAAGATCCAGAAGCA GAGAAAGGCGTTGTTGAAGACTCCGCCCAGGTTTCCGGCGTAGACGTCGG CGATGAATCAGAGGTCGACGATAATGAAGATGTAATTGGAGAGGAAGACG GCAATGAAGACGGCCATGAAGACGCGGCTGGGGGAGATGGCGCCGCTTCC TCCCTCGCAGCCTCCTGCGAAGCTGTCGGCGCTGGTGAATACACATACTC CATGCCCCTCCCCCCCTACCCTCTTCGGCCGGCGACGGGCACTTCAGCTG CACAGGGGAGGGAGTAAGTGGAGCAGGCACATGAGCCCGAGTGACATCGC GAGTTGTTACAACGGTGCGCGATTCAGCCAGTATGCGCATAGCCTTTGAG ATGCTTTCGTTGCGGTCTGAAGTAGAAACATGGTCGGGCTTTCGGCTCCA GCTTGTTACCTCTCTTTACTTTACACGGCGACAGATCACCAGGTTTCGCC TTCGTCTCTGTACGGTTCAATGCGCGGTAAGCCTGGTTAAAAGCACCCCC CCAGAGAGATTTTCCTTTAGGGGTGTCGAAACTGGGAAAGAGCACCTGCA CTTTCACTGTAGCGGCTAGTATAGCCATCTCTACAGCGCACAAGCCACGC TCCGCTATGCCATTGAACTCGTGGCATTCCGGGGCAGTACATTCTCGGGT GATGTTACGCGCATTGCAGAGCTCGTCACCCCCCCCCCCGAAAAACTCCC CTCGATTGTCTGACCGTACTATGACTGCTTCCGAAGGAACTTCGTCCGCA CGCACGTCTGCCAACCACCTCTCGAAACTCTTAGCCGCCTGGCTCTTTGC CTCAAAAAATATATCCACATGTATCTCGTATGACCATCTCTATTGAACAA AGTGTACTTCCTGCTCCCATCGGACTCGACCGGTTTTGGGCCCAATAAAT CAGCAAAGACTTTCCCGAGTTTCTTATCTGTGCGAGAGCTTGTAGAACTT TTGATCGGTTGCCCTGTACCTTTGTGCATTGAGCAACCCGTCCACTCATG AAGCTCCCCATTCAGCTTCACTCCCATCTGAGCCGCAGTCTTTCGAACAT CACCTCGTAAGAATGACTGTGCGAACAGTGAAAGTCGTTCATGTCTACAA GAGAGTCGGATTTGCTGGGCGCGGTGCCCGGAGCAAATACGGCGTTGGCG GCTTCTGAGGGGTTGCTATCGACGTTATTTCTTTTCGCCACATAAATAAT TAAGTTGGCCAGCTGAAAGGCATATTCAACACCCCTCCGGTGCTAAGATA ATTATTTGTTCCTCCTTTATTGCCAACATACTCATGGTCGGCACCCGCAA CTTTCCTCAGTGAAATGAGCTTGTAGTGCAGTTCTGACGATCTCAAAGGA GGAAACGAGGAAATAAGTAAGAATAGCAGGCGTATTTAAGAAGAATATAG CGTATTTAAGAAGAATATAGCGGATTTAAGAAGAAAATAGCGGATTTAAA AAGAAAATAGCGGATTTAAGAAGAATATAGCGGGTGTAACTTTTGTCAAG GAAAACAAGGACTGCCAAGAGAAGCTGCGAGTAAGGACAATCTGGAAGAA TACCAACAGACTGGATGAAGGGATAGGGTTGAAGGGTTACCTATAGGGGC CATGAGACGTAGGCCCAAAGTTGAGAGTCAGACTAAGGACGAGGGATGTT GACCTGGAGGAACGTAGGAAACGATTCAGGAAAGTAGACGACGACGACCA TGAGGTGTTCAAGAGTGACTGCCGTAGTGCGTGCGAGGGTCGGATTCGCG TGGTGGCAGAATGTCCCCTGTATTAGAAAGACAAAACAGATGTTTTACGA GCGAAGCGGGAAAAGTTGAAGAGGTCGGTAGAGAAGCCTTTAACTCCTCG GGTAGTGAAAAGAAGGCTATAGCGGTATTAGGGCACAATATTTGGCCTCA AAAGGCGATGAGTAAGGTAGGTAGGATGGTAGTAAGACCTTTTTGGGCCA CACCTCGTGATGTAGTAAACAACAATTGGCCATGGGAGATCGCTCTGGCA AGAACAGAGCTCCGTCCTTCGAGGACGCGAGGTCAATGATGTAACAACTA TGGCATGCAAATATGAGCAGCCTCCCCCCCCCCTCTTCCCCCGCACGAAA TCGCGTTGCAGATCTACCCGTTCTCTATCGTGAAGGTTTTGGTGAGGAAA GTTCTCCGCTTCAAGGAGCCCGGGAGACCCAAGTTCTATTTCCGCGAGGG CGGGACGCCTGAGGAGGTAACAGTGACTTTCGAAAATATACACACTTTTT TATCCGTTTCAGCTCCGGTTCCCATACATACAGTCAGTATCTCATCCCAA TCTCGTGAGCTGGAGAAAAACGACGTCTACAGGCATAGGAAGACCCTGCT GTTCTGACACACAGTCCGGGATACGTCGTAGATGCAGCACTGGCAGATAG TTGGCATAGTTTTGCCCATAATGACTGCAGTGCGTTAGTTATCAGGTGCG TCTGTTTGTTCCGAAACAAACTTATCCGGCGGTGCAAGCGTGAGTGGGTT GGAAAATCGCACTGTAGTGGACCTACCCTCCCGGAGAACCCAGAGAACGT AATGGAGAAAGTTCCACTGCGAACGTCTCGGAGAGGCTTTATCCCGCCAT GCCTTCAACTTTTTTCTTGTAACATTTGTTCAAGTAGTCTGGAAGTACTT GGAAGTAGCGTGTTCTTCGTATTTTGTTGGAGCTATGAACTGGCCGCCAG TTTAACTGGGCGGTTTACTGTACGTGGAGTTAGTTTATTAAAATAACCGC AAATATGTTTGAGAATGCTTCGCGCCTATCCGTTGTGTCTCCTGCCAGGG TATATAGGTCATACTTGGAAGCTTTTCCCGTGGGCATATATATTATATGC TCCAAAGATTTTCCCTCGCAAGCACGGGATGTGATCTGGCAGTAACCCCG TGTCCACCTTACCTGTTCTATGTACAAATAATGACCATTTTGAGAGCGTT AGATAATGACTTTCGAGATACCTGGTTGAGCAGGAAATTGTCCGTGTTTT TAGATATGAAACTGACCACGTCATTAGCCTCGGACAGTATCTTTTTGAAG TAACACTTGGGTAGCATGTTCACCCATGTTTGTGTTAACGTATAAACTGG TCCTTGACCCTATGTCACAGGCTTGGGGGCCACTTTAGGCGGGGCGGGGC GCATGATCATACAGGCATTTGCTTACTCCATCTAAAAAGTGCACAAGAAA TGCTACCCTCGAGTATGAAGTATGTTCAGAAGTGGGTTTCTGTCTGTAGT CTACATTACTATCGTCTACTTGTTGTGTGATATTCCCCATCAAACGATTA CAGATAAAAGACGCAAGTAGGATTAGAAGTTCAATAGTGGATTTTTTTAT CTTATTTCCTGTAGTTCGAATATAATATGACCAGGTCAACTGGTAATTCT TTTTTTTGTTTTGTTTTTTTTCGTAGAGCTGTCATTAACGAGTAAATTAG TGTTGATCCGTGTTTCTTTTCAGCATGTCGAGACGGAGGAATGCCTCTAT AGGCCACCATTTCTGCACAAAAAATGAGTACATCACGAGACAAAGGTGAA GTTTTTGGCGGCTCTGAAAAATCAGCATTTGCAGAAATGGCGGCCAGCAC CATGCATACGTGGGCGCGATAGCTGCCTGCGGTAACCAGTTACTACTTGT GCTTTTTTTTGCGAGGAAAAATTGACGAAATTTTCAAACGTGGCCACTAC GCCTCCTGCTCTCTCCTGACGACGACAACGATAATGATAACGATAACGAT AATGGCTCACAATGTCGCATGTCCGCTTACCCGCCCGCGGTTGATGATCC CAAATGTAAAACGTTTGGCAAAAAAAAAAACGCGAAAGGTGGACTGGATC GGTGCTAAGGCGCTGATTGACGCGGCCAAGGCTGCGGGCGTTAAACACTT CGTCTACGTGGGATCGATGGGGGGTACGCAGCCGGAAAACTTCCTCAACA CGATCGGGAAGCAGGAGGACGGTACAGGGGGCGACATTCTTCTCTGGAAG AGGTGAAATCTGTAGGTGCTTGATGGGTTGGTCGGCTTGGTTGGTGTTTC GTCCCGCGATAAGACATGCCCCCTCTTTTGCGACGAGGGGCCGTCTTTTT GGGGTTACTTGCAGAAAAGAAATGTTTCACGGAAGCAAGAAGACGGCGCC ACGTCGCAGATATCGAGAATACAAAAAGCAAAAAGACAACAGGATCAACT AGCGCTGTCAAAACATTTGGGGTGGCAGGTAGCAGGTAGCAGCCACTTCC AGAAAAGCGTCATATTCCAAAGAGTGACTTACCCCTGTATGGTACGATGA CTCTGGTTGGTTGGTTGATCTTTGTGTGATTACTGGAGGGATCCAAATGC TTTTTATTGGATGCCGTATTTCACTCTTTTTTCTTGTGGCTGGCGGTCAT TTCCGCTCCGGTCAAATAATTTGGAAGTTATGCTTCTCTAAATAACAACG TAGTATCTTCTGTTACTTGATTCGTCTATTATTTGGACATCTAGTTGCGT GCAGAAAAGAGGAAATTTCGTTGGGCTGTTGTTTTTTCAATAGCAGCAGA AATTCTTTTTTCGAGGTTTTACTACGGTAATCGCAGCAAGGTCGACTTTG GCACTTCTCACCACAAGAAAGTATGTGGGGCAAGAAAAAAACGTGAGGGC TATATCCAGCCGAAGCTATGGGCTGTAATCGCACATCCAGATTCCGTTCA GCAGAATACACGCAGCAGGATGACGCTCGCATGGGTTGTTTTGTCGCGTG TGCTGTGGGGTAAGCCTTACATTGCGTCTGTTGAATATTTGAGCTGGTGT AGTTGTGTGGACCTAGCGAGATCAGCAGCGCTCGTTTGTTCCGCTGCTGT GGCCATGCTGTGCCCACATCAGTGCTTGAATGCAGTGTAATGCGAGGGAT GATGGATTGATAGATCCACGAGCGTCAGAATAGGCAGGGAAGCAATATTC ATGAAAAGGCCCCGCTCCAATCCACGGTAGATTGTGTTTCTGGAAAGGGA GAAGGTATTAGCGTCTATAATCATGGCTAACTGCCGTAGGCAATGATAAA TACTCTCACTCGCCGAGTATCCATGCACATTTCCTTCTCGTTCTTGGTTG GGCTGCCTTGTAAGAACGGTAATACCGTGTACTATTTACGAAATTTGCTC CTTTTTTTTCATTTTTTTTTTATGGCCTTTCAATTCAAGATACAAGCTCA TGTTTGTGCATCCTACTGTATTGCTTGCTTTTTCTGCCCGCCTCTTTCCC TTTTAGTATTATTTTGAAAAGCAGCTTTTGAACGTGCGAAGCACGGGTCA AAACTACCCTCCCCCTCCCTGCCCCTCCCGTGCCGTGTCGTCAGTAAGGA CGGAGAGACGAACATCACCCGCGCCGTCTCCCTCCCGATACCTTGACATA CATGGATCTAATTCAAAGGTTTTGCAAATACGGAATTCCTGTTATCAATA TCAATTAATGCGCTATGGAACACGGGGACTGTCGGCGAGTTGTAGGTGGC GCTCAACACGAGTGTGAGGGAGTTGACACAGCTGCACGCCCAATATGTAT TGGACCAGCAGATGCCAAAGCCTAACACTACGGTTGATGACGGCCACACC TCTCTTCCCTTTGAGCAGGAAGGCTGAAGAGTACCTCATTGCTTCGGGAC TGACGTATACAATCGTACATCCCGGTGGGCTCCTTGACGCGGAGGGACGC AAGCGACGGCTAGTTATCGGAGTGGATGACACCTTGTTGGAGAGAAAAGC GAGGAGCATTCCTCGCGCAGATGTTGCGCAGGTGCGTTTGTGTGCTTTTT TGTGTGTTGTCATTTCCTATTTTGTTGAAAAGAAAATCAACGGTCTCTCT GGTTTATTCAGTTTTGTGGATAAGTAATTCAACAGCTCAAAAAGGTGCCG AACACACCTCTATTTTTTTGCGGTCATAATCCATCAAGTACCACAGTAGT TAGTATCTGCGTTGTTGTCGTCCAGTTACGTAAAAACTATGTCGAAAACA TCCACTAGAACCAACCATCTGAGATGAAATCTGTTCAAAACCCGGATTCC GTCAGATCCAGGCAGGCTGCAGGTATCAGATCCTAAAGGTTACTGGATGG GTAACAATCGAGGCTACCAACGGAAGATGCAACAGTGTGTGAACAACCGA CCGAAATTCCAAAGAGCAAGCCAGGCTACACTCTCAGTGAGAGTAACCCC GCTTTGCTCAATTATTAGCTGAACTCCTCCTTCATATCACGTAAGGAAAA TAAAACATTCACTTCTTCGGTGGTTAAACTCACGGGATGTCCCGTTTCAC AAACCTTATCTCTCTATATATATGTATATGTTGCGGACTCATTTAGCTGT TTGTAGTCGCAGTACAATCGAGTGAATCGCCCAAATGTCTCTCGTGGGAT AGGGCAAAAGGTTCGGCTGCTTGAGTTGGACCCGGCACGATCGTGTTCAT TAAATATTACGCACGCCCTATTTCAGGGTTATGCCTTGCGCAAGCATTCT CGTGACACGTGTACGACATGTTACCTTGCACGTTCGATTGTTTGTCGTTG CTTATTGATATCACTGTGTTTTTTGCTCGTTCATACCACGCCAATTACCC CCCCGCCCCCGCCTCTGATGTCACCCCCTACCGGCACCCGATTCAGCTGT GCGTTGAGTGTTTGGGCTTGGATGTCGCAAAGAACCGCTCATTCGACGTC GCCAGCGACTCAGAGGGAGAGGTATGTGCCCGATACGACAAAAGAATGCC CGTTTGGTTACGTGTGGTATGTGCAATATCGCTGTGCGTATTTCGCGCCA CGTGGGGGGGGGGGGTTCTTTGACCCGTTGAACTAGATGAGGAAGGGAAC GCTTAAAGGAGAGAGCGTGAGAAAGAGAGAACGAAAGAGATATACAACAA TCTATTTATTTTTCCAGCAACAGCTTCTGGAAGTCCGAATTGTGCGAGAA TGACGCTATATGAGGGGCGAAGGATGTTATGCAAGTTGTGTGTAGCATGA TGAACAACCAGTCAAGTAAGTTGCCAGTTCTTCGTCCAGACGGTGTCTAT CTGCCGCCTGCTCGCCCGCCGCTACCTCTCCCCCCTCCTGTCATGTGATT TACCACGCGACGGTTGCCTCTTGATGGTCATGCTCTGCATTGCTGTTTCC TCTTTTCGCATGAACTTCGCTCCCCTTGTTGATCTGTTCAGTTGCCTGGC GTAATCTCACAACAATCATGCTTGTAAAACGTGCCCATTAGCAATCTGTA TTTCATCGGCAGCGTGCCCGTGCACTCCCGCTTGCTCCTACTTCTGTTGC CATGTTGAATCCTGGGCGATTTGCAGGGAGAGGTGACGACCGATTTCCGC GCGTTTGTGGAGGGCTTCTCGGGCAACACAGACTACACTAAATCACCCCA GGCACCTTCCATGAGTTGATCACGCGGCTGTTGAGCGGAGACACGTTTTT CTATCATTTCTGGTAACAAGAACGTTTAGAACGGTTCTTCGACACGTGTG CCGTGTTTTGGCATGGTTTCATGGGAAGTAGTGTTATTTTCGTTCGGTGT TCTCTTGTTGTGGGGGTGATTGTTGCTGTTGTAGTTCTTGCCGGTGTGTG ATATCTAAATGTCGAGGAATGTTTAGTTCGCCTGCTGCCTCCTGGCGGTG TGTGTGTGCGCGCGCGTGTGTATATTTCCAATGTTGTTTGGCACTTCTTT TTCTTTTTCTTTTTCACCCCTGGAAGGCTGAGGCAAAAACATTTACCGAT GCTTCCATACTTAGTATTTTAACAAAGTATTCCTACATTTCCTTTAACAG AACAGAGTTATTTATTCCTCTGAGGGGTAGGCGCCATCCCGCTTCGGCCG AACCAAGTAGGCAGTGTGCACCCACTAAAATACCTCTGACTAGACTTCCA GTCATGCTCAGTTCACGAGCTACCCTATCCGTTTGGGCGTAGGTCCGTGC TGTTTGGCACTCTCTTTGTGTTTGGGAGCGATTTGCTTCGAAGCCATCTT TAGATTCAGTATCGATTGTGCAGCTGTAAGAGGAAACCGGGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4627:37..14128-

>mRNA_H-paniculata_contig4627.11559.1 ID=mRNA_H-paniculata_contig4627.11559.1|Name=mRNA_H-paniculata_contig4627.11559.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2016bp|location=Sequence derived from alignment at H-paniculata_contig4627:37..14128- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAACACGTGGGGAGTTAATGGTATTGATTGGCACCATGGCCAACTC
TATGCGTGCGTGTTCAGCGTTTGCCCTGGCAGCCAGAGCAGGACTGGCGT
TGGCAAGCAGATGCGAACACGTGGGGAGTTAATGGTATTGATTGGCACCA
TGGCCAACTCTATGCGTGCGTGTTCAGCGTTTGCCCTGGCAGCCAGAGCA
GGACTGGCGTTGGCAAGCAGGAAAACAAGCGCTAGCGGTATAACTATGTC
CGCACCAGAAGCAGCCCTGAAGCAAGTTCTCGTCACTGGTGCGGGCGGCC
GCACTGGAGGCATTGTGTTTGACAAGCTCTTGGCGAGGGAGGGCTACGCG
ACGCGTGGGATGCTCCGCAGTGAAAAGGAAAACAAGCGCTAGCGGTATAA
CTATGTCCGCACCAGAAGCAGCCCTGAAGCAAGTTCTCGTCACTGGTGCG
GGCGGCCGCACTGGAGGCATTGTGTTTGACAAGCTCTTGGCGAGGGAGGG
CTACGCGACGCGTGGGATGCTCCGCAGTGAAAAGAGTGCGCAGAAGCTGA
AAAAGAGCAAGGCACAAGTGAAAGACGATAACGTCGTTATCGCTGACGTC
ACGGACCCCGCAAGCTTGGCGGTGGCCATGCAGGGAATCGAGGAGGTTGT
GCTGTGCACCAGCGCTGTTCCCAAGAGTGCGCAGAAGCTGAAAAAGAGCA
AGGCACAAGTGAAAGACGATAACGTCGTTATCGCTGACGTCACGGACCCC
GCAAGCTTGGCGGTGGCCATGCAGGGAATCGAGGAGGTTGTGCTGTGCAC
CAGCGCTGTTCCCAAGATCTACCCGTTCTCTATCGTGAAGGTTTTGGTGA
GGAAAGTTCTCCGCTTCAAGGAGCCCGGGAGACCCAAGTTCTATTTCCGC
GAGGGCGGGACGCCTGAGGAGATCTACCCGTTCTCTATCGTGAAGGTTTT
GGTGAGGAAAGTTCTCCGCTTCAAGGAGCCCGGGAGACCCAAGTTCTATT
TCCGCGAGGGCGGGACGCCTGAGGAGGTGGACTGGATCGGTGCTAAGGCG
CTGATTGACGCGGCCAAGGCTGCGGGCGTTAAACACTTCGTCTACGTGGG
ATCGATGGGGGGTACGCAGCCGGAAAACTTCCTCAACACGATCGGGAAGC
AGGAGGACGGTACAGGGGGCGACATTCTTCTCTGGAAGAGGTGGACTGGA
TCGGTGCTAAGGCGCTGATTGACGCGGCCAAGGCTGCGGGCGTTAAACAC
TTCGTCTACGTGGGATCGATGGGGGGTACGCAGCCGGAAAACTTCCTCAA
CACGATCGGGAAGCAGGAGGACGGTACAGGGGGCGACATTCTTCTCTGGA
AGAGGAAGGCTGAAGAGTACCTCATTGCTTCGGGACTGACGTATACAATC
GTACATCCCGGTGGGCTCCTTGACGCGGAGGGACGCAAGCGACGGCTAGT
TATCGGAGTGGATGACACCTTGTTGGAGAGAAAAGCGAGGAGCATTCCTC
GCGCAGATGTTGCGCAGGAAGGCTGAAGAGTACCTCATTGCTTCGGGACT
GACGTATACAATCGTACATCCCGGTGGGCTCCTTGACGCGGAGGGACGCA
AGCGACGGCTAGTTATCGGAGTGGATGACACCTTGTTGGAGAGAAAAGCG
AGGAGCATTCCTCGCGCAGATGTTGCGCAGCTGTGCGTTGAGTGTTTGGG
CTTGGATGTCGCAAAGAACCGCTCATTCGACGTCGCCAGCGACTCAGAGG
GAGAGCTGTGCGTTGAGTGTTTGGGCTTGGATGTCGCAAAGAACCGCTCA
TTCGACGTCGCCAGCGACTCAGAGGGAGAGGGAGAGGTGACGACCGATTT
CCGCGCGTTTGTGGAGGGCTTCTCGGGCAACACAGACTACACTAAATCAC
CCCAGGCACCTTCCATGAGTTGAGGAGAGGTGACGACCGATTTCCGCGCG
TTTGTGGAGGGCTTCTCGGGCAACACAGACTACACTAAATCACCCCAGGC
ACCTTCCATGAGTTGA
back to top