mRNA_H-paniculata_contig4622.11547.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4622.11547.1
Unique NamemRNA_H-paniculata_contig4622.11547.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A6H5L4A4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A4_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.100e-33
Identity = 76/232 (32.76%), Postives = 123/232 (53.02%), Query Frame = 2
Query:    2 DGKVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREFPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHFEINLTAMTPA 697
            +G+  +G+K ++S +  E G +  +K R +A+GF QI  + +  S    P+AASI+  +A    M   + H+D  QAY+ A +  E  +  PE Y    G V  +  A+Y   Q+GR W  +    L   G E    DPC+FRK   GE+V+++V++VDD+L +    E  E+F   L  K  ++ LG+ ++Y GC I  + E    KL +  Y +++   F++  TA T A
Sbjct:   22 EGRKAIGSKWVFSWKTNEKGLIVDFKSRMIARGFSQIPGIDFHHSFSACPSAASIKTVIAVATEMGKKLAHWDVKQAYIHAKLKEETCLRFPEGYGNMSGKVVKVERALYGLKQSGREWGFEAAGALIENGYEQCRVDPCVFRKVVDGEVVSLIVIYVDDILVVADEGEREELFAS-LNKKFPVESLGEYTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTLA 252          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: O23588_ARATH (Retrotransposon like protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=O23588_ARATH)

HSP 1 Score: 126 bits (317), Expect = 1.120e-29
Identity = 70/207 (33.82%), Postives = 116/207 (56.04%), Query Frame = 2
Query:    8 KVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREF------PGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNRE 610
            K  +G K +++ +    G + +YK R VA+G+ Q + L YE +  P     S+RM L   A M   +   D + A+L  D+D E+Y+ +P  Y +       P A+  L+ +IY   QA R W +KL+  LK +G + SNAD  +F K+  G L+ +L V+VDD++ ++ + +A+  F  +L S  K++DLG A Y++G  I R+ +
Sbjct:  955 KKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYANGVLMGVL-VYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEK 1160          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6LS40_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LS40_9ASTR)

HSP 1 Score: 123 bits (308), Expect = 1.700e-28
Identity = 70/223 (31.39%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    5 GKVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHF 667
            G   +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA RCWN++  + +K  G   +  +PC++RK  +G  ++ L+++VDD+L +      +      L +   +KDLG+A+Y +G  I R+R K+ L L +  Y   +   F
Sbjct:  786 GSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVYKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGSTISFLILYVDDILIIGNNIPMLNEVKNWLGTCFAMKDLGEAAYILGIKIHRDRSKRLLGLSQSTYIDKMMTRF 1007          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: Q9MAJ8_ARATH (F27F5.19 n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9MAJ8_ARATH)

HSP 1 Score: 123 bits (308), Expect = 1.760e-28
Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 2
Query:    8 KVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREF------PGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRN 604
            K  +G K +++ +    G + +YK R VA+G+ Q + L YE +  P     S+RM L   A M   +   D + A+L  D+D E+Y+ +P  Y +       P AV  L+ +IY   QA R W +KL+  LK +G + SNAD  +F KF +G L+ +L V+VDD++ ++ +  A+  F  +L S  K++DL  A Y+ G  I R+
Sbjct:  908 KKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEESLDYEETFSPVAKLTSVRMMLLLAAKMKWSVLQLDISNAFLNGDLDEEIYMKIPPGYADLIGESLPPHAVCRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKFASGVLMGVL-VYVDDIMIVSNSDNAVTQFTTELKSYFKLRDLSAAKYFFGIEIARS 1111          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR)

HSP 1 Score: 122 bits (307), Expect = 2.280e-28
Identity = 70/223 (31.39%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    5 GKVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHF 667
            G   +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  PE + +  +P  V  LN +IY   QA RCWN++  + +K  G   +  +PC++RK  +G  ++ L+++VDD+L +      +      L +   +KDLG+A+Y +G  I R+R K+ L + +  Y   +   F
Sbjct:  506 GSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGRTISFLILYVDDILIIGNNIPMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRF 727          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6MMD4_9ASTR (Uncharacterized protein n=6 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MMD4_9ASTR)

HSP 1 Score: 122 bits (306), Expect = 3.260e-28
Identity = 70/223 (31.39%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    5 GKVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHF 667
            G   +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA RCWN++  + +K  G   +  +PC++RK  +G  ++ L+++VDD+L +      +      L +   +KDLG+A+Y +G  I R+R K+ L L +  Y   +   F
Sbjct:  839 GSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRVLLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPSKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGSTISFLILYVDDILIIGNNIPMLNEVKHWLGTCFAMKDLGEAAYILGIKIHRDRSKRLLGLSQSTYIDKMMTRF 1060          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A6H5K307_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K307_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 4.080e-28
Identity = 70/217 (32.26%), Postives = 117/217 (53.92%), Query Frame = 2
Query:   17 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREFPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHF 667
            + +K L+  +++  G   K K R VA+G  Q + + +     PT A++S+RM  A    +D+ + HFD +QA++ A ++  +++ +PE      G +  LN ++Y   QA R W   L + L  LG E   AD C+FR    GE+V +LVVHVDD+ A+ T KE  + F  DL     +K LG+  +Y GC+   +RE   + + +  Y + + + +
Sbjct:  151 IKSKLLFDWKVDAFGFPTKAKARLVARGDMQKEYIDFGDLYAPTVASSSVRMLAALACELDLELCHFDIDQAFVRAPLNENIFMRMPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCLFRFVEGGEVVLLLVVHVDDIFAVGT-KERCDQFGKDLGEYVPVKSLGELKWYSGCYYEGDREAGRMTISQQTYTEELGERY 366          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A251T958_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T958_HELAN)

HSP 1 Score: 119 bits (298), Expect = 3.810e-27
Identity = 68/221 (30.77%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   17 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHFEI 673
            +G+K ++ R+ + HG +  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  P+ + +  +P  V  LN +IY   QA R WN++  + +K  G   +  +PC++RK  +G  ++ L+++VDD+L +      ++     L S   ++DLG+A+Y +G  I RNR K+ L L +  Y   +   F++
Sbjct:  844 VGSKWVFKRKTDMHGNIQTYKARLVAKGFTQTQGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPDGFIDPKYPNRVCKLNKSIYGLKQASRSWNLRFDQKVKEFGFVKNEDEPCVYRKA-SGSAISFLILYVDDILIIGNNIPMLKEIKHWLGSCFAMQDLGEAAYILGIKIYRNRSKRLLGLTQSTYIDQVMRRFKM 1063          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A6H5KL18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL18_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 4.400e-27
Identity = 70/217 (32.26%), Postives = 113/217 (52.07%), Query Frame = 2
Query:   17 LGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREFPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHF 667
            + +K ++   +   G   K K R VA+G  Q + + +     PT A+ S+RM  A    +D+ + HFD +QA++ A +  + ++ LP+      G +  LN ++Y   QA R W   L + L  LG E   AD C+FR    G++V +LVVHVDD+ A+ T KE  + F  DL     +K LG+   Y GC+  R+RE   L + +  Y + + + +
Sbjct:  328 IKSKLIFDWNVNAFGFPSKAKARLVARGDMQKEYIDFGDLYAPTVASYSVRMLAALACELDLELCHFDIDQAFVRAPLKEDNFMRLPDGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRLVEGGDVVLLLVVHVDDIFAVGT-KERCDQFGKDLGEYVPVKSLGELKLYSGCYYERDREAGRLTISQQTYTEELGERY 543          
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Match: A0A5N6LHI8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LHI8_9ASTR)

HSP 1 Score: 119 bits (297), Expect = 4.480e-27
Identity = 69/223 (30.94%), Postives = 117/223 (52.47%), Query Frame = 2
Query:    5 GKVMLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAASIRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYRE--FPGAVGWLNNAIYRPVQAGRCWNVKLTEDLKTLGSE*SNADPCMFRKFFTGELVTILVVHVDDLLALTTTKEAMEVFVGDLCSK*KIKDLGKASYYMGCHITRNREKKELKLDEHLYAQTITDHF 667
            G   +G+K ++ R+ + HG V  YK R VA+GF Q + + Y+ +  P     SIR+ LA  A  D  I   D   A+L   +  ++Y+  PE + +  +P     LN +I+   QA RCWN++  + +K  G   +  +PC++RK  +G  ++ LV++VDD+L +      +      L +   +KDLG+A+Y +G  I R+R K+ L + +  Y   +   F
Sbjct:  246 GSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDENFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPSKACKLNKSIHGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGRTISFLVLYVDDILIIGNNILMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRF 467          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4622.11547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4A4_9PHAE2.100e-3332.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
O23588_ARATH1.120e-2933.82Retrotransposon like protein n=1 Tax=Arabidopsis t... [more]
A0A5N6LS40_9ASTR1.700e-2831.39Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
Q9MAJ8_ARATH1.760e-2834.63F27F5.19 n=1 Tax=Arabidopsis thaliana TaxID=3702 R... [more]
A0A5N6LW24_9ASTR2.280e-2831.39Integrase catalytic domain-containing protein n=2 ... [more]
A0A5N6MMD4_9ASTR3.260e-2831.39Uncharacterized protein n=6 Tax=Mikania micrantha ... [more]
A0A6H5K307_9PHAE4.080e-2832.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A251T958_HELAN3.810e-2730.77Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A6H5KL18_9PHAE4.400e-2732.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6LHI8_9ASTR4.480e-2730.94Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4622contigH-paniculata_contig4622:6788..7486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score82.8
Seed ortholog evalue1.3e-13
Seed eggNOG ortholog5286.M7WCH5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs2YC45@29000,38DPC@33154,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPucciniomycotina
Best eggNOG OGNA|NA|NA
Exons1
Model size699
Cds size390
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4622.11547.1prot_H-paniculata_contig4622.11547.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4622 6801..7190 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930380.9857416-UTR-H-paniculata_contig4622:6787..68001622930380.9857416-UTR-H-paniculata_contig4622:6787..6800Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4622 6788..6800 +
1691481265.9816546-UTR-H-paniculata_contig4622:6787..68001691481265.9816546-UTR-H-paniculata_contig4622:6787..6800Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4622 6788..6800 +
1622930381.007302-UTR-H-paniculata_contig4622:7190..74861622930381.007302-UTR-H-paniculata_contig4622:7190..7486Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4622 7191..7486 +
1691481266.0035005-UTR-H-paniculata_contig4622:7190..74861691481266.0035005-UTR-H-paniculata_contig4622:7190..7486Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4622 7191..7486 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930380.9971797-CDS-H-paniculata_contig4622:6800..71901622930380.9971797-CDS-H-paniculata_contig4622:6800..7190Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4622 6801..7190 +
1691481265.9936395-CDS-H-paniculata_contig4622:6800..71901691481265.9936395-CDS-H-paniculata_contig4622:6800..7190Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4622 6801..7190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4622.11547.1

>prot_H-paniculata_contig4622.11547.1 ID=prot_H-paniculata_contig4622.11547.1|Name=mRNA_H-paniculata_contig4622.11547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
MLGTKRLYSREIEEHGEVGKYKCRSVAQGFRQIKRLHYEGSSFPTPAAAS
IRMALATGAMMDMGIRHFDFNQAYLLADIDTEMYVDLPEEYREFPGAVGW
LNNAIYRPVQAGRCWNVKLTEDLKTLGSE*
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mRNA from alignment at H-paniculata_contig4622:6788..7486+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4622.11547.1 ID=mRNA_H-paniculata_contig4622.11547.1|Name=mRNA_H-paniculata_contig4622.11547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=699bp|location=Sequence derived from alignment at H-paniculata_contig4622:6788..7486+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGATGGAAAGGTGATGCTGGGTACAAAGCGACTGTACAGCAGGGAGATCG AAGAACACGGCGAGGTAGGCAAGTACAAGTGCCGCTCCGTCGCCCAGGGC TTCCGTCAGATTAAGAGACTACATTATGAGGGGTCATCGTTCCCTACGCC CGCAGCGGCCAGCATTCGCATGGCGCTTGCGACCGGAGCAATGATGGACA TGGGGATACGCCACTTCGATTTCAATCAGGCGTACCTGCTGGCTGACATC GACACCGAGATGTACGTCGATCTGCCGGAGGAATACCGGGAGTTCCCGGG CGCGGTGGGATGGCTGAATAATGCAATCTACCGCCCGGTGCAAGCCGGCA GGTGCTGGAACGTGAAGCTCACCGAGGACCTGAAGACGTTAGGGTCCGAG TAGTCGAATGCCGATCCCTGCATGTTCCGCAAGTTTTTTACTGGGGAGCT GGTGACGATCCTCGTGGTGCACGTGGATGACCTTCTGGCCCTGACCACCA CGAAGGAGGCAATGGAGGTGTTCGTGGGGGACCTGTGCTCGAAGTAAAAG ATCAAGGATTTAGGGAAGGCGTCCTACTATATGGGCTGCCACATCACCCG TAACCGGGAGAAGAAGGAACTGAAGCTCGACGAGCACCTCTACGCGCAGA CGATCACAGACCACTTCGAGATCAATCTGACCGCCATGACCCCGGCGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig4622:6788..7486+

>mRNA_H-paniculata_contig4622.11547.1 ID=mRNA_H-paniculata_contig4622.11547.1|Name=mRNA_H-paniculata_contig4622.11547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig4622:6788..7486+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGGGTACAAAGCGACTGTACAGCAGGGAGATCGAAGAACACGGCGA
GGTAGGCAAGTACAAGTGCCGCTCCGTCGCCCAGGGCTTCCGTCAGATTA
AGAGACTACATTATGAGGGGTCATCGTTCCCTACGCCCGCAGCGGCCAGC
ATTCGCATGGCGCTTGCGACCGGAGCAATGATGGACATGGGGATACGCCA
CTTCGATTTCAATCAGGCGTACCTGCTGGCTGACATCGACACCGAGATGT
ACGTCGATCTGCCGGAGGAATACCGGGAGTTCCCGGGCGCGGTGGGATGG
CTGAATAATGCAATCTACCGCCCGGTGCAAGCCGGCAGGTGCTGGAACGT
GAAGCTCACCGAGGACCTGAAGACGTTAGGGTCCGAGTAGATGCTGGGTA
CAAAGCGACTGTACAGCAGGGAGATCGAAGAACACGGCGAGGTAGGCAAG
TACAAGTGCCGCTCCGTCGCCCAGGGCTTCCGTCAGATTAAGAGACTACA
TTATGAGGGGTCATCGTTCCCTACGCCCGCAGCGGCCAGCATTCGCATGG
CGCTTGCGACCGGAGCAATGATGGACATGGGGATACGCCACTTCGATTTC
AATCAGGCGTACCTGCTGGCTGACATCGACACCGAGATGTACGTCGATCT
GCCGGAGGAATACCGGGAGTTCCCGGGCGCGGTGGGATGGCTGAATAATG
CAATCTACCGCCCGGTGCAAGCCGGCAGGTGCTGGAACGTGAAGCTCACC
GAGGACCTGAAGACGTTAGGGTCCGAGTAG
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