prot_H-paniculata_contig4620.11542.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4620.11542.1
Unique Nameprot_H-paniculata_contig4620.11542.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length197
Homology
BLAST of mRNA_H-paniculata_contig4620.11542.1 vs. uniprot
Match: A0A6H5K591_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K591_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.400e-26
Identity = 84/175 (48.00%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    8 QEASAVQRAKRALKEQLNLRGEAARKAQKLRDEQALALAEAADSGVGDDGGGEGRGDGRRREFATR-ELAELEERIGTGSMVIQNLQAFLVSAGRNRTATGS----------------GTARWSRLRTAWDNKTALSILLAEAVKAKVIGMDFAENSSVKDMELRSLAREVSTLR 165
            +E +AVQRAKRALK QL LRGEAA +AQ+LR+          D+   ++G   G G     E   + EL  LE RI T S      + FLVS  R  TA  S                G ARW+R+RTAWD+KTALS+L +EAVK KV+GMDFAE+S++KDME+R L RE S+LR
Sbjct:  103 EEDTAVQRAKRALKAQLKLRGEAAGRAQELRE----------DAARDEEGVAAGAGAEMESEHCRQGELEALEGRIATAS------KTFLVSTDRKNTAPASRLAAGVSTTAATGGAAGAARWARVRTAWDSKTALSLLFSEAVKFKVLGMDFAESSALKDMEVRRLLRENSSLR 261          
BLAST of mRNA_H-paniculata_contig4620.11542.1 vs. uniprot
Match: D8LMX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX1_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.920e-20
Identity = 71/152 (46.71%), Postives = 90/152 (59.21%), Query Frame = 0
Query:    8 QEASAVQRAKRALKEQLNLRGEAARKAQKLRDEQAL---ALAEAADSGVGDDGGGEGRGDGRRREFATRELAELEERIGTGSMVIQNLQAFLVSAGRNRTATGS----------------GTARWSRLRTAWDNKTALSILLAEAVKAKVIG 140
            +E +AVQRAKRALK QL LRGEAA +AQ+LR++ A     +A  A++    +G  +G            EL  LEERI T S  I++LQ FLVS  R  TA  S                GT RW+R+RTAWD+KTALS+L +EAVK KV+G
Sbjct:  959 EEDTAVQRAKRALKAQLKLRGEAAGRAQELREDAARDEEGVARGAEAETESEGCPQG------------ELEALEERIATASKAIKSLQTFLVSTDRKNTAPASRLAAGVSTTAAAGGAAGTTRWARVRTAWDSKTALSLLFSEAVKFKVLG 1098          
BLAST of mRNA_H-paniculata_contig4620.11542.1 vs. uniprot
Match: A0A835YYL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL2_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.340e-9
Identity = 58/168 (34.52%), Postives = 85/168 (50.60%), Query Frame = 0
Query:    6 VTQEASAVQRAKRALKEQLNLRGEAARKAQKLRDEQALALAEAADSGVGDDGGGEGRGDGRRREFAT-------RELAELEERIGTGSMVIQNLQAFLVSAGRNRTATGSGTA--RWSRLRTAWDNKTALSILLAEAVKAKVIGMDFAENSSVKDMELRSLAREVSTL 164
            + +EA+A+QRA+RAL  QL LR EAA K              A D+G G    G                    R   E+EER    S VI++LQ ++V+  R     G G A  RW+RLR++W+ K  ++ LL+ AV A+V G++ AE ++++D E      EV+ L
Sbjct:  872 LVEEAAALQRARRALGAQLELRAEAAAKLH------------AVDNGAGRSTAGXXXXXXXXXXXXXXXXXXXXRLRTEVEER----SAVIKSLQEYVVAGQREEGGEGGGKASSRWARLRSSWEMKVVMTHLLSRAVCARVTGLEAAEGAAMRDHEAAQARSEVARL 1023          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4620.11542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K591_9PHAE1.400e-2648.00SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMX1_ECTSI2.920e-2046.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YYL2_9STRA2.340e-934.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4620contigH-paniculata_contig4620:6079..7750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4620.11542.1mRNA_H-paniculata_contig4620.11542.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4620 6079..7750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4620.11542.1 ID=prot_H-paniculata_contig4620.11542.1|Name=mRNA_H-paniculata_contig4620.11542.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MVVFFVTQEASAVQRAKRALKEQLNLRGEAARKAQKLRDEQALALAEAAD
SGVGDDGGGEGRGDGRRREFATRELAELEERIGTGSMVIQNLQAFLVSAG
RNRTATGSGTARWSRLRTAWDNKTALSILLAEAVKAKVIGMDFAENSSVK
DMELRSLAREVSTLRLAATRRPAGLGGAREAMAAAVAAATEAVEAVG
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