prot_H-paniculata_contig462.11539.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig462.11539.1
Unique Nameprot_H-paniculata_contig462.11539.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length213
Homology
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.490e-33
Identity = 77/222 (34.68%), Postives = 126/222 (56.76%), Query Frame = 0
Query:    2 HQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYITPKGLK--IGAIRTDNGGEF-DGDSHLKLDEHGASHELTPSDTPQYNGVAERRLGLLRETTIALMQN--------QTEGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H   AH+ + + R TA+  G  L G+  AC GCS++KA R  + ++  +R+     R++ DLGG   + S+GG  Y II+ DD++R   + F++ KSD  +A ++++A  +   G+   +  +R+DNGG+F  GD     +E     E TP+ +PQYNGVAER LGL+ E  +A            Q   ++K+WA AM++AC+    +  S+   +++PYE
Sbjct:   38 HNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYE 258          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.250e-32
Identity = 79/223 (35.43%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    2 HQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEY---ITPKGLKIGAIRTDNGGEFDGDSHLKL-DEHGASHELTPSDTPQYNGVAERRLGLLRETTIALMQN--------QTEGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H   AH+ + + R TA+  G  L G+  AC GCS++KA R  + ++  +R+     R++VDLGG   + S+GG  Y +I+ DD++R   + F+K +SD   A ++++A     I P  ++I  +R+DNGGEF G     + +E     E TP+ +PQYNGVAER LGL+ E  +A            Q   ++K+WA AM++AC+    +  S+   +++PYE
Sbjct:  258 HNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYE 478          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.050e-32
Identity = 80/216 (37.04%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    7 HASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYIT---PKGLKIGAIRTDNGGEF-DGDSHLKLDEHGASHELTPSDTPQYNGVAERRLGLLRETTIAL-MQNQT-----EGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H+ + + R TA+  G  L GE   C GCS AK     +P K   RA    +R++VDL G  RV SLGG  Y +I+ DDY+R+  V F+K KSD   A + Y+AE      P  + +  +R+DNGGEF +G+      ++    E TP+ +P+YNGVAER LGL+++  +A  +Q  T          +WA A+ ++C+    + T+S     +PYE
Sbjct:  684 HSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYE 897          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.080e-32
Identity = 80/216 (37.04%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    7 HASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYIT---PKGLKIGAIRTDNGGEF-DGDSHLKLDEHGASHELTPSDTPQYNGVAERRLGLLRETTIAL-MQNQT-----EGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H+ + + R TA+  G  L GE   C GCS AK     +P K   RA    +R++VDL G  RV SLGG  Y +I+ DDY+R+  V F+K KSD   A + Y+AE      P  + +  +R+DNGGEF +G+      ++    E TP+ +P+YNGVAER LGL+++  +A  +Q  T          +WA A+ ++C+    + T+S     +PYE
Sbjct:  519 HSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYE 732          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.100e-32
Identity = 80/216 (37.04%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    7 HASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYIT---PKGLKIGAIRTDNGGEF-DGDSHLKLDEHGASHELTPSDTPQYNGVAERRLGLLRETTIAL-MQNQT-----EGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H+ + + R TA+  G  L GE   C GCS AK     +P K   RA    +R++VDL G  RV SLGG  Y +I+ DDY+R+  V F+K KSD   A + Y+AE      P  + +  +R+DNGGEF +G+      ++    E TP+ +P+YNGVAER LGL+++  +A  +Q  T          +WA A+ ++C+    + T+S     +PYE
Sbjct:  532 HSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYE 745          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.130e-32
Identity = 80/216 (37.04%), Postives = 119/216 (55.09%), Query Frame = 0
Query:    7 HASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYIT---PKGLKIGAIRTDNGGEF-DGDSHLKLDEHGASHELTPSDTPQYNGVAERRLGLLRETTIAL-MQNQT-----EGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H+ + + R TA+  G  L GE   C GCS AK     +P K   RA    +R++VDL G  RV SLGG  Y +I+ DDY+R+  V F+K KSD   A + Y+AE      P  + +  +R+DNGGEF +G+      ++    E TP+ +P+YNGVAER LGL+++  +A  +Q  T          +WA A+ ++C+    + T+S     +PYE
Sbjct:  675 HSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYE 888          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.490e-31
Identity = 77/222 (34.68%), Postives = 126/222 (56.76%), Query Frame = 0
Query:    2 HQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYITPKGLK--IGAIRTDNGGEFDGDSHLKL-DEHGASHELTPSDTPQYNGVAERRLGLLRETTIALMQN--------QTEGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H   AH+ + + R TA+  G  L G+  AC GCS++KA R  +  +  +R+     R++VDLGG   + S+GG  Y +I+ DD++R   + F++ KSD  +A ++++A  +   G+   +  +R+DNGGEF G     + +E     E TP+ +PQYNGVAER LGL+ E  +A            Q   ++K+WA AM++AC+    +  S+   +++PYE
Sbjct:  191 HNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYE 411          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.040e-31
Identity = 80/222 (36.04%), Postives = 123/222 (55.41%), Query Frame = 0
Query:    2 HQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYITPKGLK--IGAIRTDNGGEFDGDSHLKL-DEHGASHELTPSDTPQYNGVAERRLGLLRETTIALMQN--------QTEGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H   AH+ + + R TA+  G  L GE   C GCS+AKA +  + ++   R+     R++VDLGG   V S+GG  Y +I+ DD++R   + F+K KSD   A +S++A  +   G+   +  +R+DNGGEF G     + +E     E TP+ +PQYNGVAER LGL+ E  +A            Q   ++K+WA AM++AC+    +  S+   + +PYE
Sbjct:  670 HNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYE 890          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.050e-31
Identity = 80/222 (36.04%), Postives = 123/222 (55.41%), Query Frame = 0
Query:    2 HQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYITPKGLK--IGAIRTDNGGEFDGDSHLKL-DEHGASHELTPSDTPQYNGVAERRLGLLRETTIALMQN--------QTEGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H   AH+ + + R TA+  G  L GE   C GCS+AKA +  + ++   R+     R++VDLGG   V S+GG  Y +I+ DD++R   + F+K KSD   A +S++A  +   G+   +  +R+DNGGEF G     + +E     E TP+ +PQYNGVAER LGL+ E  +A            Q   ++K+WA AM++AC+    +  S+   + +PYE
Sbjct:  377 HNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYE 597          
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 2.610e-31
Identity = 78/222 (35.14%), Postives = 125/222 (56.31%), Query Frame = 0
Query:    2 HQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDKRATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIK-KSDVTAALQSYIAEYITPKGLK--IGAIRTDNGGEFDGDSHLKL-DEHGASHELTPSDTPQYNGVAERRLGLLRETTIALMQN--------QTEGSEKVWAAAMNYACDITKMSCTSSIEGNVTPYE 211
            H   AH+ + + R TA+  G+ LTG+  AC GCS++KA +  +  +   R+     R++VDLGG   V S+GG  Y +I+ DD++R   + F+K KSD  +A +S++A  +   G+   +  +R+DNGGEF G     + +E     E TP+ +PQYNGVAER LGL+    +A            Q   ++++WA AM++AC+    +  S+   + +PYE
Sbjct:  576 HNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLAS-VRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYE 796          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig462.11539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE2.490e-3334.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV76_9PHAE1.250e-3235.43Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JTI6_9PHAE6.050e-3237.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JZQ8_9PHAE6.080e-3237.04Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE6.100e-3237.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE6.130e-3237.04Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JRL9_9PHAE1.490e-3134.68Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JBA7_9PHAE2.040e-3136.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.050e-3136.04Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE2.610e-3135.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 46..212
e-value: 3.5E-17
score: 64.3
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 57..167
e-value: 1.0E-13
score: 51.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 41..212
score: 17.812
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 30..175
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 30..175
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 51..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig462contigH-paniculata_contig462:610..1248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig462.11539.1mRNA_H-paniculata_contig462.11539.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig462 610..1248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig462.11539.1 ID=prot_H-paniculata_contig462.11539.1|Name=mRNA_H-paniculata_contig462.11539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
MHQFLAHASQQITRDTAETAGVVLTGEWGACKGCSIAKAHRFVVPKKIDK
RATWAAERLYVDLGGPMRVTSLGGSSYVIIIVDDYSRFQAVKFIKKSDVT
AALQSYIAEYITPKGLKIGAIRTDNGGEFDGDSHLKLDEHGASHELTPSD
TPQYNGVAERRLGLLRETTIALMQNQTEGSEKVWAAAMNYACDITKMSCT
SSIEGNVTPYEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf