prot_H-paniculata_contig4619.11536.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4619.11536.1
Unique Nameprot_H-paniculata_contig4619.11536.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length49
Homology
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.140e-20
Identity = 45/49 (91.84%), Postives = 46/49 (93.88%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            MQGSYVGD + SVMGIMNGTTNFMLTKME EGADYAAVLKEAQDLGFAE
Sbjct:  145 MQGSYVGDSIQSVMGIMNGTTNFMLTKMETEGADYAAVLKEAQDLGFAE 193          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A835YR06_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR06_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.520e-18
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q  YVGD +T V+GIMNGTTNFMLTKME EGADYAAVLKEAQDLGFAE
Sbjct:  145 LQQDYVGDSITKVVGIMNGTTNFMLTKMEQEGADYAAVLKEAQDLGFAE 193          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 4.140e-15
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q  Y+GD++  ++GIMNGTTNFMLTKME EGADYAAVL EAQ LG+AE
Sbjct:  220 LQNDYLGDKIRKILGIMNGTTNFMLTKMESEGADYAAVLAEAQALGYAE 268          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 5.640e-15
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q  Y+GD++  V GIMNGTTNFML+KME EGADY  VLKEAQDLG+AE
Sbjct:  213 LQNDYLGDKILKVCGIMNGTTNFMLSKMESEGADYGEVLKEAQDLGYAE 261          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A067BV06_SAPPC (Homoserine dehydrogenase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BV06_SAPPC)

HSP 1 Score: 74.7 bits (182), Expect = 1.860e-14
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q SY GD +  + GIMNGTTN+ML+KME EGA Y AVLKEAQDLGFAE
Sbjct:  146 LQSSYTGDGIQEIAGIMNGTTNYMLSKMEKEGASYDAVLKEAQDLGFAE 194          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A6G0WX43_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX43_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.870e-14
Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q SY GD +  V GIMNGTTN+ML+KME EGA Y AVLKEAQDLGFAE
Sbjct:  146 LQSSYSGDVIKEVAGIMNGTTNYMLSKMEKEGASYEAVLKEAQDLGFAE 194          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A1V9ZXW6_9STRA (Homoserine dehydrogenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXW6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.880e-14
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q SY GD +  + GIMNGTTN+ML+KME EGA Y AVLKEAQDLGFAE
Sbjct:  146 LQSSYTGDGIKEIAGIMNGTTNYMLSKMEKEGASYDAVLKEAQDLGFAE 194          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A6A4YYC0_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YYC0_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.990e-14
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q SY GD +  + GIMNGTTN+ML+KME EGA Y AVLKEAQDLG+AE
Sbjct:  147 LQSSYSGDVIKEIAGIMNGTTNYMLSKMETEGASYEAVLKEAQDLGYAE 195          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A485LM83_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LM83_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.580e-14
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q SY GD +  + GIMNGTTN+ML+KME EGA Y AVLKEAQDLGFAE
Sbjct:  148 LQSSYSGDVIKEIAGIMNGTTNYMLSKMEKEGASYEAVLKEAQDLGFAE 196          
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Match: A0A2D4BYK6_PYTIN (Homoserine dehydrogenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYK6_PYTIN)

HSP 1 Score: 73.6 bits (179), Expect = 5.080e-14
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE 49
            +Q +Y GD++T + GIMNGTTN+ML+KME EG  Y AVLKEAQDLGFAE
Sbjct:  302 LQNAYSGDDITEIAGIMNGTTNYMLSKMEHEGIAYDAVLKEAQDLGFAE 350          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4619.11536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG9_ECTSI1.140e-2091.84Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YR06_9STRA1.520e-1883.67Homoserine dehydrogenase n=1 Tax=Tribonema minus T... [more]
A0A6V1RNX4_HETAK4.140e-1571.43Homoserine dehydrogenase n=3 Tax=Heterosigma akash... [more]
D7FNL8_ECTSI5.640e-1571.43Homoserine dehydrogenase n=1 Tax=Ectocarpus silicu... [more]
A0A067BV06_SAPPC1.860e-1471.43Homoserine dehydrogenase n=3 Tax=Saprolegniaceae T... [more]
A0A6G0WX43_9STRA1.870e-1473.47Homoserine dehydrogenase n=1 Tax=Aphanomyces eutei... [more]
A0A1V9ZXW6_9STRA1.880e-1471.43Homoserine dehydrogenase n=1 Tax=Thraustotheca cla... [more]
A0A6A4YYC0_9STRA1.990e-1469.39Homoserine dehydrogenase n=1 Tax=Aphanomyces astac... [more]
A0A485LM83_9STRA2.580e-1471.43Homoserine dehydrogenase n=1 Tax=Aphanomyces stell... [more]
A0A2D4BYK6_PYTIN5.080e-1469.39Homoserine dehydrogenase n=1 Tax=Pythium insidiosu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001342Homoserine dehydrogenase, catalyticPFAMPF00742Homoserine_dhcoord: 4..49
e-value: 3.1E-15
score: 56.5
NoneNo IPR availableGENE3D3.30.360.10coord: 1..49
e-value: 1.6E-16
score: 62.6
NoneNo IPR availablePANTHERPTHR43331FAMILY NOT NAMEDcoord: 2..49
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 4..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4619contigH-paniculata_contig4619:527..673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4619.11536.1mRNA_H-paniculata_contig4619.11536.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4619 318..673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4619.11536.1 ID=prot_H-paniculata_contig4619.11536.1|Name=mRNA_H-paniculata_contig4619.11536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=49bp
MQGSYVGDEVTSVMGIMNGTTNFMLTKMEMEGADYAAVLKEAQDLGFAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001342HDH_cat