mRNA_H-paniculata_contig4616.11532.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4616.11532.1
Unique NamemRNA_H-paniculata_contig4616.11532.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4616.11532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4616contigH-paniculata_contig4616:1092..12231 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_000720.1
Exons5
Model size747
Cds size486
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930378.880205-UTR-H-paniculata_contig4616:1091..11591622930378.880205-UTR-H-paniculata_contig4616:1091..1159Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4616 1092..1159 +
1691481265.0455291-UTR-H-paniculata_contig4616:1091..11591691481265.0455291-UTR-H-paniculata_contig4616:1091..1159Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4616 1092..1159 +
1622930378.9701037-UTR-H-paniculata_contig4616:12038..122311622930378.9701037-UTR-H-paniculata_contig4616:12038..12231Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4616 12039..12231 +
1691481265.1250622-UTR-H-paniculata_contig4616:12038..122311691481265.1250622-UTR-H-paniculata_contig4616:12038..12231Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4616 12039..12231 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930378.893852-CDS-H-paniculata_contig4616:1159..11861622930378.893852-CDS-H-paniculata_contig4616:1159..1186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 1160..1186 +
1691481265.065553-CDS-H-paniculata_contig4616:1159..11861691481265.065553-CDS-H-paniculata_contig4616:1159..1186Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 1160..1186 +
1622930378.912874-CDS-H-paniculata_contig4616:4244..43701622930378.912874-CDS-H-paniculata_contig4616:4244..4370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 4245..4370 +
1691481265.0838432-CDS-H-paniculata_contig4616:4244..43701691481265.0838432-CDS-H-paniculata_contig4616:4244..4370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 4245..4370 +
1622930378.9266148-CDS-H-paniculata_contig4616:5336..54261622930378.9266148-CDS-H-paniculata_contig4616:5336..5426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 5337..5426 +
1691481265.0937855-CDS-H-paniculata_contig4616:5336..54261691481265.0937855-CDS-H-paniculata_contig4616:5336..5426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 5337..5426 +
1622930378.945135-CDS-H-paniculata_contig4616:6748..68981622930378.945135-CDS-H-paniculata_contig4616:6748..6898Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 6749..6898 +
1691481265.1037965-CDS-H-paniculata_contig4616:6748..68981691481265.1037965-CDS-H-paniculata_contig4616:6748..6898Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 6749..6898 +
1622930378.9586911-CDS-H-paniculata_contig4616:11945..120381622930378.9586911-CDS-H-paniculata_contig4616:11945..12038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 11946..12038 +
1691481265.1134188-CDS-H-paniculata_contig4616:11945..120381691481265.1134188-CDS-H-paniculata_contig4616:11945..12038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4616 11946..12038 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4616.11532.1prot_H-paniculata_contig4616.11532.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4616 1160..12038 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4616.11532.1

>prot_H-paniculata_contig4616.11532.1 ID=prot_H-paniculata_contig4616.11532.1|Name=mRNA_H-paniculata_contig4616.11532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
MRRFEEKKQEGERRLREQREEELRKREAVAFARQETAKTKLLEDDRQRKA
EEEARLEKEALLQKRQLEKQAAAMAKFEEQQRLKKMTEEERKAYLAEKAL
KEAVEQAVNDLTRAVEDKATIKEKPVESPEETGPETPTTPGKDSVPDADK
CWMEKKCCVVM*
back to top

mRNA from alignment at H-paniculata_contig4616:1092..12231+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4616.11532.1 ID=mRNA_H-paniculata_contig4616.11532.1|Name=mRNA_H-paniculata_contig4616.11532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11140bp|location=Sequence derived from alignment at H-paniculata_contig4616:1092..12231+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAACAAAGACGGAGACAGGAAGACGAACAGAGGCGGGCAGACCAGCTA AAGCAGCAGGAGGCTACTATGCGTCGATTCGAAGAGAAGAAACAGGCAAG CTGTACAACTCATTATAAGCGCGACATCTGTTAATATATAGGATTACGAC TATGAGTCACTCTTCAGAGCATGATACTGCTGTAATTGACTACTCCAAAA GTCTTGATGATATTAACTTTAGTATGTTTGTTATTCTTGTTTTTTGAGCG GGCGATGTATATATGTCTATATCTATATATGTGTTACTTCCTCTGTCTCG TAAGTATACTCAGTTAGGAATATAGAGGCGCTTGAATTTGCACCGTTGTT TTTGTATTTTTTTATCGGAATTCTAGATGTTTGTTGTGCTGAAGCCCAAA TTCTTGGGTCAAACAGTTGACTTTTAACATTTCTTACACGCGCCGTGAAA TAAGTACTCGACCAAAAAAAGCCCTCTTTTTGGACTCTTTCCCATTGAAC TCGAAATATACTCTAGCACAATTTGGCATTTTTCAGGCGCGTGCTTTTTT TTTCACGGCGTGTGTTTGGTTAAAAGTTAACCATTTGAGACCGTCTCTCA TGCGGTTGGATTTTCTATTCCAGATACAGATTTTCGAATTTTTCGACCCA GTGATATTCGACTTCCCATGTTATGCGGGTGGATTTCTTGGAAATCTGAG TTGAGAAATTCAAGACGGGAGGTAAAGCCGGCCCCATTCCCCTATTACGA GCAGAAATTAGAGTTGCCATCGCGTATCGAATTTCTTGGAGTACCACCAT ATGGAGGCGTTCATTTAGTTGTTCATCCTAAATTTGAAATGTCACACCCT GTAGCAATACACAACCACGAGGATACAGACAAGCCGGGAGGTGTGTGACC CCCGTCGCCATATAGAATTTGCGAGACTGCTAGCCCCGGGGGTTTCCTCC ACCCACCGGAGGAAGCTGTGAACCGCGATCTTATCGTACAATTCAACCAT GGCCTTGTTGTTGTTGGCCTGAGACATGGTCTCATTGTTCCGATTCACTC CAGTACAAGCGTACGCAGTGGTACATTCCGCAGTGGTACATTCCGCAGTG GTACATTCCGCAGCCGATTTGATACCCTGAGCCTTCGTGTCATTCCAGGT GCATTCCGCGCATGGGTTCGTCGTAAGATGCGTCGCAGTTGACGGTGTAG AATGGTGATGCGAGTGATGTGAGTGTGTACTGAGTTGTGCACTGAAGGGT GACGTGTACGAGGATGATGTTTTGGGTAGTGTGTTCGAGGACCCAACGTG GGAGGGTGTGATTGAATTTTGAATTATGCCGCTTGCACTACTACGCGTGC AAACTTCCATCAAAATCCACGTTTGGGAAATCCGATTCCGTAACAAACGC GAATCAAATATTGAACATGAGGTTTTTCTACCCTTGGAGAAATCGTACAG TAGAGATGACCTGACTCAATATTCAAACGATGGGGAAAACTAATTTCTGC TATGATTTCTCTTTTTTCCAGTGATCGAGGTTCAGAGCGAATATCGAACG AGGAATGGAAACTAATTATCGACAGCCATTGGAGTTTGATACAAACGATA TCATGCCACAGATACGTTAGTAGCGCGTGACGCCTTCGATATATAATATA CTTCGATAGAGAATAGAGATGATCCCGAAAGGAACGTCACCATCATCTTT GTCTTTGTCACAACCACACACATGAAGTAATAAGTACAATTTTTTTTTTT CCCCCATAACTTTTACATCAATTAACGTCTTCATTTGATCGAAACGGTGT TGAAATTTCATATGTTTTTAAACATGTTGAGAGCTTGTAACGCTGAGCGA GGTGGACATGAAAAATTTCCGCAGGTTTTCAGGTTTAAATATATATATAA ATATTGAGAGAAAGAGAGCAAATAATCATCCATCGTTCGTTGTCCTCGTT GGTATTGTCTCCCAAAAGTGACCATCGCTCAGATGTGTAATTTTTTTTAA AGCCAAGCAACAAAAAACGTTCATCCCCCTAACAGACACAAAATACTTGC AAAAGATTTTTCACAAAAAACTGAAAATATTCGCCTGAGTTTCAAAATGA GCGGACACGTGCAGTAATATACCCACCCCTGTCCATTCGATTTACGAGTA TTACTAGTAGTCGTGGATGATCCGGGGTACATCATAAAATACACGAGCTT AATCTGAAACACGGGGGAATACTTTCAGTTTTTTTGTTAAATCCATTTCC AAGTAATCGTAAATGTCCCAGGGGGGTGAAAAAATTAGAATATCAACCTT TTCCGCCTGCGATGAGATACGAACCCGAAAACTCTTGCTGAACAAGCCGC AAAACGATCAGTCATGCATTCAATGTACCAATACCAAAACATTTACACAA ACTTTACCGTATTAACAAAACATGTGTCATAATCCACGACTCATGGGCTA TGGCTTGGTACCCTCAGCACCAAGATTTGTTTTGAGAATTACTTTGAGTA CAGAGTTAAAAAAAAAAGCTGCGCCGAAACGGGGCGATAACAACACGATG ACAACATGCTTTTTTTGTATTCGTGGCTGAAACGCCACCCTTTGAATATG AAACCCCGTCACAAATATTTTCCAAATCCGATTTTCCCGAGGAACGAAAA GGAGTCCACACATAAAATGACTTCGTAGTCGTCTGGAACGAGTGACTAGG CGATGGTAGCCCTTTAGCACCAACATCCCGACCCCCAATAGGGTGTCAAG CTGAGAAAGAGATCCACTGTTAAACATACAAGATTCATGCATGCACACGG TCGGAGAGGGCGAAAATATCAATAGTATCGCAGAGACAAGGAGCTTCTTT TTCGATGACGGGTTAAGGGGTCTTACGTTAACTACGCTAGTGAGGACATT TGTAGTTTAGTTGGGACAGTGGTTCCTAGAATTTAGATTATTCTGGGCAT TTAAATAGAGTACTACACGTACGCAAACCATGAAGGTGACTCATAATAAA AGTGAAGCAGTGATACTTGTTGCATTTACTTGCATGTACTTTATACATAT ACTTTTCTCTTGTTTTTGTTTTTGTTTTAAGAATGCCACGGAGCCTGCAC AATATCAGAAGGCACATAATGTAACAATTGTGTTTACTTCTCCTGGTGTG TAGGAAGGGGAGAGGCGACTACGGGAGCAGCGCGAGGAAGAGCTGCGAAA AAGGGAGGCTGTGGCGTTCGCCAGGCAGGAGACGGCCAAGACAAAGCTTC TAGAGGATGACAGACAACGAAAAGCAGAGGTGATAACGGTCCCAGTCGCA CTGCGTGACTCAAAATAAAAAGAAAAAAGAGCCTCGCGGGAAGAAACCGG CATTTGTATACGAGACACAGGTTGACGACACGGGTTGCTGCCAGCATTAC TTGGTCTGGAGCCTAATTGTAAACGATCATGGTGGTGGTGGTGATGTTGA TCCAAAATGGCCACAATTTCGTGGAAACAGTAAAGAAGAAAGCTCAAGGG CCTGCTGGTTTAAAGCGGATTTTATTATTTTGATAGGGATATTCCCGCGT ACTGGCCCATCTTGTCTTAGATCTTTACGAGGCAGGAAGAGGCCATCTAT CGCGGATGTTGAACGACCCTTGTACAATGGTTTAGCGCCTTATTAAGTTT TTGAAGTTGTTGAACCCCTGTGGCATCGGACCCTGAAAAATAACAAATAA TGAACCTGACAGTCCCGCGGCGAAACCACTTCGAAAAGGGGGAGGGGGTC CAGAGCAAACACGAGAAATATGAGAAAAATCACGTTTCTCGCAACCTCGA CCCCCTGTACCTCGCGGAGGCGTTTTGTGTATGTTGCTAATTTCGTGCAA GGCACCATTTCTAGGTTGGCATTGTGTAGGGATTATACGGGGTGCGGTAA AGCAGGTGTCCTGGTGTTCAAGTTTATTTGAAATAGTTTTAGACATCCTG TATGTTTCGCGGGGAGAATATTTGGTGTCCAGCAGCGCTACAGTTACTGG ATGTGGGCAGAACCGCATCAACAACAACTACTATCTGTGCTGAACTACTG TGCGTCTCAAGAGCGTTGGATCCCTATATCTTACTAGTTGTGTCATATTC TATTTTGAGGGTAGCGGTTCCTAGGGAGTAGAGGGGCGCCGGCGCTCGAA GGTTAGTATATACAGAATCTCCCCAAAATGCCAAGTTCAAGTGACTGATA GATTGACTGATTCGCCGATGGACTGACTGATTCGTGTCGGAGCAGGAGGA GGCACGTTTGGAGAAAGAGGCCTTGTTGCAGAAGCGCCAGCTGGAGAAGC AGGCCGCGGCGATGGCTAAGTTTGAAGAGCAGCAGGCAAGATAACACCGG GGGAAACAATCTTGGGATGCTTTGAACGTGACGCCTTGATTTGTGCAGAT CTTCGTCATTGGTGCAGTAGTTATACCATGGTAACTATCATATTAGTCTT TCAATACTGTCGTGCAAACTGGAGATATCACGATTCGAGTTTTTTTTTTT AAATAATGGGAAGTGGCAAATCCGAATAAATATAGATCACTTGTCTGCTT CTCTTCCTGGAGATCATTGGTTCGAACCCCAGCATCGATACCACAAAAAA CAAGGAAAGTTGAGCACCCAACAACACAGTCGCAACTTATGGTGAGGGAC ACAGTCGTGTGAAGCAGGAGATTGTGACACCTCGCCGCGAGCTGGATATG GATGGAAGCAGCGGAAAAGGTTTTTACCTCAGCCTTCCGGGGGTTAAAAA AAAAAAAAAAAAACTCGCCGCGAGCAGATCGGGTTTCGGTTGCCCCTACA CTGAAGTCCTCTGAAGGAAGGCCCCAAGAAAGGGGCTGGCTTAGTGGCGG CCCCCTCAGTAGCAGCTTAAAGGGGGGCAAAAAACACACAATACCTATCG AGGACAGGTATCCTCATTTTCATCATGTGTCTTGACCAACATATTCGCGG TACAATTTGATTATATACATGAGTGATTTTATTCCCGCAGGAGGTTCCGA CTCGGATATGGCGATCTGTAAACCTAAGAGAAGATTGTAGCACGTGTGTA GCCCAGTTCATAAGGGCCATGAAGACCTGACCTCATCCCCACCTTCCTCA AGCTTATTTTTTTTTTGTTCTGCAAAAATTTTATATATATTTTTATAAAA CCTAGAAGCTTTTAGTGGTATATATTTAGTTTATAATTAAAAAGATCAAA ACACAAAGTAACAGGGGTTGCGCTCGTAATTAGAAGTAACCAAACATCTC ACGACACGAGCTGACGATGGCCATGCAACACCTGAAAGTTTCAAAATACA TCATGTCTCCATAAAGATGGCAAACTCACAAGAACTGGTAAGGTTACGCG CGTTTAATCGCAAAGAGGCTACTGGTCATTGTCCAATTGTCACTAATCAC GGGCAGACCCCCCCCCCGCCCCCCATTTTCGTATGCAATTCCTCACCCAA AAGCCCTGGGCCGTCAACTCTAGATGTTCGGAAGAGTTGGTCATGGCGCC AACGGGCTTAAAAGCTTTTCTTGTGTATCATGTACTCGATACGGTTTACA AGGATTATTTTGCTGGTCAGGGCTTTGCTTTCATTTTCAACAGTCACATC TGAGTCTGAGAATAATGATAATGATTATTGTTAACACTTCATTAAATAAT TGAACAGCGGTTGAAAAAGATGACGGAGGAGGAACGCAAGGCCTATCTGG CAGAGAAAGCCCTCAAAGAAGCTGTGGAGCAAGCTGTGAACGACTTGACA AGAGCCGTGGAAGACAAAGCCACGATCAAGGAGAAGCCGGTCGAGTCACC TGAGGAGGTGAGACATTGCGATGGTCGCGAATATTTATTCAAAGCCGCGG CGAGATAAACACAAGTCTTTTTTGTCCCCCGAAGCGCCGAAAACCTAGTA GAAATTCCGTTTTGGGCAGAAATTGTAAATTAACGTATTATACCCGGCAT AAGGCAACACAGAAGTTGGTCCAGCCGCCTGAGGAATGTGATTTTTGTGT CGGTCACGAACGCTGATTCAACTGCACCGGCGAAACCTCAAGGTGCATCT AGCTGCCCCCCATGTCCAAACATCGCCGGGAATTGGGTCATCTTTGGGCA AGTATTGCTTACAGCGGACATTGCACTGTAGGAAGTCTCCAGGTTCTGAT ATGGGTGCAAATTTCTGTGGATTTTCCCGCCTCTGCACCCCCTGTGATGC TGTACCTCTGAGATTTTGTTACATTCTTCTGTAAAGATGTTGTCCCATCG ACTTTCTGCAACGTTGTTTGTGCTCCAAACACAGCAGCAGCATTTACAAT TGGTCAAAGATGATGCTTGAGTTATACAAGCTCAGCATATTTGCTGATGC AAGAGACATGATCACGTCACCTTTCTAAGCTGTCCTCGTTGCGTACGCAG CACGCGTTTTTGATCCAAATTGGCGGTAACGGTGCCCATTTGAGCTACCC TAAAGCATACTGTGCCTTGGGAGTGAGGTCTTACGGTTATTGTCAGAGCA GGGATACTGGTAGTTGTGCTATTGGGTCTGCTTGCGTCGGGGCACAAAGA AGCATAAACGACGACTCAAAATAGTTGTCAACCAATGCTTTGAACCAATT GGTCAGCAGGCCTCTAAGTTCATCTGTTTGAGCAATTAATTACCGCTGGA TTGAAATAAAACATGAAGTTGAAGTGCTTCTATTATACACGAGTTTTAAT GAGTCACGGGAAGCGCAACGAGTCCGTGTTCCTATAGTCGAAATTTTGAT GCCAATTATGTCTATGCGAGAGCGTAAGAGAGCCACGGTGGTCCCAGGGA GTCTGTAAATATTTCATCCCCCGGACAAGAACGAATACTGGGCGTATTCG CCTGGGTTTCATAATGAGCGGATACATATATATAAAGTACCGAACCCCTG TCCAGTCCATTCACGAGTATTATTAGCAGTCATGGACGGTCCACGGCACA TGTAATACACGAGCTTATTCTGAAACCCAGCCGAATAGTTTTCAATTTTC AAGGCGAATACGCCAACTACTCTTGTGTGTCCGGGGAGTGAAATATTTAG CGAAACGAATGATCAGTGTGTATATATGCAAGCGTGAGAAGGGTGCAGTG GGCGCAGTGAATCCGTGCGCGTGAGCTGGAGGTACGGCGATATCGTCCAC GTAGTCGACGCGACTGGCATAGCCATGGCTAGTCCACCACGAGCTGGTTC AAACAGGAAATACCAAAAAGTGTCTCTCCGTGATTCCTCGATCAGTAGGT GTCGTAGGACCAAGCCGAAAATAGTTTATGACTCGAAGCGACGAGAGGAG TTGCTCGGTGTCGAGATTTCTCCAATCCGGCAACTAGATGATCCCTAAAG AATCTACTGTCAGGGCCTTGGTTTTTTCTGATCTGGGTGCCGGGTATACT CATTGAAGTTTCATCAACACGAATTGGCCGGAATTGCACCAAATCGGCAC AAATTTGTTGTGTGTATGTTTCTGAAGGTGTGAACAGAACGCCGATCGTT CGTTTGTGGTCTAATTTCTCTTGGTTTATAAGTTATGGCAAAAATCGATA GCCCTGAAATACGCTATATACTAATAGCTAAATATTTCGGGCAGTTTCAA TACGATATTGTCCTCGTTCATTTTTACCCGATTATCGGAAGGAAAGAAAA AAAAAGCGTCACAAAAACTCTGAAACTAAAATTCCTAGCAAAAGTTCTGA AAAACGAAAAATGAAATACTCAGAGCCGACTGCGTTACCGCCAACAAGAC CCGGAACTACTGTGACAAGAAAACCCGATACAAATTGGAGCAAAGCCAAA AGAAACAATCAATAAACCCGTCCATCACAAAAATCGGAAGGATACATAAC AGTGTAAACACATTCAACAAACGAGCGCCTCACACTTGAAAGAGCTCATT GTTACGCACTAACCTTGCCCCAACGCGCTTGAGCACATCTTCGAAAACCC CTGGTACTGCGGAGTACGGAAGGAAACCCCGCGTTCTTTACGATGCGCCG AAGGTACAGTAACGGTATTTTACGGTATGGTGTCTGCTTGTCGCATTGTC GCTAAGGGGAAACGGGCTGGACGGTTCAGGTCCCATGGTAATCACGTTTT GTTGTACAGTGCACAGTTACGGGAAACAGAAATGGAGTGTTTCACGATGA TCTTCCCGAATACTGTGTTGTACTGCGTGATACCATGGTTTTCCTGCTTT TCGTATATCAGTATTGTTGCCGAGAGGGCTCCTGAAAGATTTTCTCATTC CATCCTTTTTTTCCCGGGGTTCCTACTCGTGCGGTGGCTTGCTGACCTGG TCGACATCGCCGGCGGCGAAATCGCCCGGACCAACCAGCTACCGCCGTGC TACTGACCTGTGGATGACCTTTAGCCCATCCCTCTACTCTTTTAGATCTC TAATCGCAGCATGTCTTGCGGAACCGGAGCCAGCGACAGACCAGTTACCG CTTTCGACTTACTCGTGGAGTCCCTCTGCATGGACCCGCGCTTCACCATC AATGGCGCGGTTTTGGCTCGATAAATATTCCGTCTCGGGTTCTAACATTG CCGAACCCCCACACGGGTCTGAAGTAGATAATGCGGCAGTGATTTAAGGT TACTGTGGCGCTATATCTGACACAGCCGCTGTGCTGATCTGTCCGTCTAA GGCATGTCTTCCGATCCCTAGACACCGCCAATGTCAACGTCTACACTTGC CGTCCTGGGGTACATGAGTACATAGAAGTACTAATTCGCCTCGCTTTCGT TGTCGCGGCCTGAGGTGCCTTCAACATGGTTGACAACTTTCGTAATCGTG CCTTCATTCACCAATGGGATAGGGAACACGCCCCCAACTTGAGATATATC AGATCGAAATGACGCTGGCAACAAGGCGATGAACTTCGTCGCGCTGCTCA TGCAGTGCCAAGTTCCAACTCGCTCTGTCGATCGCATCATTGTGCTCAGT GCACCCTGGCCAACACTGATTGCCCGAGGGAATCAATTCCGCTGCGTCAT CTTCTCTACCTTTTCCACATGGAACCACGCATTTCCCGATCACGCTCTCC TACCCATTTTCTTCATCGGCATTACCAACCTGGACACCAACCCGTGTGTC GAAGTTGCCCCGTGGCGCTGGTCCGAAGTACGCAGTGATACCGTCCTCGG CGTGCTCTACGCTAGCGCACCGGATTTCAATCAAGGAAGCCAACGCTTTT CCAGACCGCCCCGCAGGCCACGATCCACTTTCACAAGGGTGCCGCATGGT AGGACATCCGTATGTCATCGAGCCTCACAGAACCCACCTGTCACCGAGCA GCGATGACGCCGCTGATAATCCGCAATTCCAACGCTCTGCCATCATCTTG CGACGCGGAGGAGTCGACAGCCTTCAGTTTCTCTCTTGTGTAGCGTGCGG GATCCAACGCTCCGAGTTTCTTGGAGCCATGAACGCACTGCTTGAACTAT GGGTTACCTTCTCGAAGGCCCCGTTGTCTCTACGGAAGTAGTCCCTGCCT GGCCCTACCTGGTATTGAGTGATGAGTACGCTAATGATGACGTCCATCTC AGATTATTTTTTTTATCATATCGAAGCGTGTTTTTTCCATTTTTCACGCG ACATGGAACAGTTTGACAGAGGTGTGAGATAGTTACGTCACTTGGGGTGA AATAGCCGTAGCCTGCCGACTATTATTTACTAGTAATGAGAGGAAATCAC TCTCGCACGCACCTCTTTTTTATTTTTGCTATATTCTATTCGACGAGCTC CGATCGTCCGCTCGACCTTCTCGGCCTTGAGCACATTCACACGCACATGA GGTTTCACGCCTTTTCGAAATTCAGTCAGAAACAGCTTCAAATCGGGGTT AGTAGGTACCTAGTCTGACTCCATGCATCCACGCATGAATTGTATCCATG ACGTGACGGTTCAAATTGACGGGTTGGTAGCAATTATCTTTTTTTCTGAG GGTTCATGTGGCACTTTTGCTTGTCAGCAGAAGGGTCACGAGAAACTCTA AACTGGGGAAGGGGACCAACGTGTCCAGGACAAGAATCGTAACTTCGTTT TCATATGCGATATTAGTGATCTTTTTTCTTGTGGATATTGGCAATAAGCG TATAATGATTTTAACTTCGACCTTTTTTGGTTTCATTGTAATGCCTAATA TATCGAATATCCACATGTTTTTTTTACCATCTGTTGAAACCGACCGTTCG CCGTACATGGCTGGCATGTTTTATGACAATTACCGCATCTTCACTGCGGT CCTCTGCTGGGGAGATTACACAACTGCACAACCTAACCCCCCCTATGATT ATCTATCATCAGCGCTGAAGATCGTACCTTTCGGGAGCGATGATGGTGCG ATCTATGGAGAAACGCGACTTTTGTTTAGGTGGACCTCCTAATTTACTCC GTTGTATGATTTCATTCGAATCACCATGAGCCCGTAAGCTATTCATTAGA GCTTCACGTGATACCTTGATTTGCCGTGGTTCAAGGTGTAGAGCCAAAAT TATCACTCTCAACAACGCGTAACGATCAGTGTATTACCCAGTGAAACCTG AAACCGTCGGTATCTTGTCGAGCAAAAACGAGAATTGACTCGCCTGGCAC GAGTTTTAGCCTAATGTGGAATCTATTGGAATGCCTTGGTTGCACCACTC GACACAACCATTTCTGTCTACAGCGAGCTACAACCTATCCGAGCACGCGT TGTCCATGCTCTAACAGCTGCATCATGAAAAACATGAGTACAACCCCTTG CCCCCCCACCCTGATCCCACTCCATGCCCACTTCGGTCTTGCGCTCGTCT GGGCGGCGGATTTTTTGTGCACCTGGTTATGTCCCTGCCCTTGCGTGCAA ACAGACTGGCCCCGAGACCCCTACAACACCTGGCAAGGATTCTGTTCCTG ACGCTGACAAGTGCTGGATGGAGAAAAAATGTTGTGTCGTGATGTAGCCG TATTATGTGCTCCAGCAATAGTTTGAGTGATGTTTCCTGCTGTTGGTGTA GTACGCAAATGGTTGACGCCCTCTCTGCTACTGGGCATGACATACTTGCG ACAAAACTGGAAAAAGTACGTCGACGTCGTCTTTTAACAAAGAGGCTTTC CTGAATTGTCAGACCCGCAATCAAACTGCCTCCTTTCTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig4616:1092..12231+

>mRNA_H-paniculata_contig4616.11532.1 ID=mRNA_H-paniculata_contig4616.11532.1|Name=mRNA_H-paniculata_contig4616.11532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig4616:1092..12231+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTCGATTCGAAGAGAAGAAACAGATGCGTCGATTCGAAGAGAAGAA
ACAGGAAGGGGAGAGGCGACTACGGGAGCAGCGCGAGGAAGAGCTGCGAA
AAAGGGAGGCTGTGGCGTTCGCCAGGCAGGAGACGGCCAAGACAAAGCTT
CTAGAGGATGACAGACAACGAAAAGCAGAGGAAGGGGAGAGGCGACTACG
GGAGCAGCGCGAGGAAGAGCTGCGAAAAAGGGAGGCTGTGGCGTTCGCCA
GGCAGGAGACGGCCAAGACAAAGCTTCTAGAGGATGACAGACAACGAAAA
GCAGAGGAGGAGGCACGTTTGGAGAAAGAGGCCTTGTTGCAGAAGCGCCA
GCTGGAGAAGCAGGCCGCGGCGATGGCTAAGTTTGAAGAGCAGCAGGAGG
AGGCACGTTTGGAGAAAGAGGCCTTGTTGCAGAAGCGCCAGCTGGAGAAG
CAGGCCGCGGCGATGGCTAAGTTTGAAGAGCAGCAGCGGTTGAAAAAGAT
GACGGAGGAGGAACGCAAGGCCTATCTGGCAGAGAAAGCCCTCAAAGAAG
CTGTGGAGCAAGCTGTGAACGACTTGACAAGAGCCGTGGAAGACAAAGCC
ACGATCAAGGAGAAGCCGGTCGAGTCACCTGAGGAGCGGTTGAAAAAGAT
GACGGAGGAGGAACGCAAGGCCTATCTGGCAGAGAAAGCCCTCAAAGAAG
CTGTGGAGCAAGCTGTGAACGACTTGACAAGAGCCGTGGAAGACAAAGCC
ACGATCAAGGAGAAGCCGGTCGAGTCACCTGAGGAGACTGGCCCCGAGAC
CCCTACAACACCTGGCAAGGATTCTGTTCCTGACGCTGACAAGTGCTGGA
TGGAGAAAAAATGTTGTGTCGTGATGTAGACTGGCCCCGAGACCCCTACA
ACACCTGGCAAGGATTCTGTTCCTGACGCTGACAAGTGCTGGATGGAGAA
AAAATGTTGTGTCGTGATGTAG
back to top