mRNA_H-paniculata_contig45955.11498.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: D7FY72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY72_ECTSI) HSP 1 Score: 146 bits (368), Expect = 6.500e-37 Identity = 86/170 (50.59%), Postives = 100/170 (58.82%), Query Frame = 1
Query: 1 VTPFELEVALGHREWNGFYSTDFDDVPNLTETWT------------------------STTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERSLVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYTG 438
VTP ELEVAL REW+GFYSTDFDD+ L + S+ T D +GD PFFSLV+GTY+ GVS+ G G S GALVG+G+RSLVEWSSPAADFL +RE++GLEALVGQTEA+ A GQSGIASDY G
Sbjct: 617 VTPLELEVALRKREWDGFYSTDFDDLLELEPPASERSGAASLNPTVASDGIESLAIGDSSPTRAAQSADDDEGDEPFFSLVTGTYQNKPGVSRKKAEGHHTGTGGSA--------GALVGVGDRSLVEWSSPAADFLGKREFKGLEALVGQTEAKAATPGQSGIASDYGG 778
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: A0A7S3XP23_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP23_HETAK) HSP 1 Score: 109 bits (273), Expect = 2.710e-24 Identity = 66/147 (44.90%), Postives = 80/147 (54.42%), Query Frame = 1
Query: 1 VTPFELEVALGHREWNGFYSTDFDDVPNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERSLVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYTGL 441
VTP ELEVALG REW GFYS DF D+ E + D D P FSLVSG+Y+ G + A D D N + I + L+E+ SPA DFL R++QGLE +G+TE RPAV GQ GIASDY G+
Sbjct: 448 VTPLELEVALGVREW-GFYSADFHDLGGEREEQVENEGGGERETEEKDPDAPIFSLVSGSYRARPGFASVA------------DRDNEN----VDSIKGKELMEYRSPAGDFLQARQFQGLEQALGETEVRPAVPGQVGIASDYGGV 577
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: A0A836CDL8_9STRA (Putative diphthamide biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL8_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.660e-21 Identity = 61/147 (41.50%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 1 VTPFELEVALGHREWNGFYSTDFDDVPNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERSLVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYTGL 441
VTP EL++ALG REW+GFYSTD D+ + T D D D PFFSLVSG Y+ V G D + NN+G + L ++ SPAA+FL REY+GLE G+++ AV+G GIASDY G+
Sbjct: 315 VTPLELQIALGLREWDGFYSTDISDLAR------NPLTPRLSASSDGDPDAPFFSLVSGGYRGVVG-----------------DREMNNSGQQDA---QGVLSKFVSPAAEFLMSREYRGLERKAGESKVHAAVDGAVGIASDYGGV 435
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: H3GMD4_PHYRM (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMD4_PHYRM) HSP 1 Score: 100 bits (248), Expect = 5.600e-21 Identity = 67/148 (45.27%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 VTPFELEVALGH-REWNGFYSTDFDDV-PNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERS-LVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYT 435
VTP+EL++AL EW+G Y TDF +V P L +T D D D+PFFSLVSGTYKT + + A + AS + D + A L ER+ L + S AAD+LA REYQGL+ +G+T A PAVEG +GIA YT
Sbjct: 371 VTPYELQLALSPTEEWDGQYKTDFREVIPALEQT---AQIVEQADGDDEDADKPFFSLVSGTYKTSSRTTASDREATTYALAASEEIDASTA---LQVKNERTELTAYHSEAADYLAAREYQGLDPRIGKTPAHPAVEGSTGIARGYT 512
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: A0A225W2U7_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W2U7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 9.480e-21 Identity = 69/148 (46.62%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 VTPFELEVALGH-REWNGFYSTDFDDV-PNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERS-LVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYT 435
VTP+EL++AL EW+G Y TDF++V P L +T S D D D+PFFSLVSGTYKT + EA A + +PN A AL ER+ L + S AAD+LA REYQGL+ +G+T A AVEG +GIA YT
Sbjct: 346 VTPYELQLALSPTEEWDGQYKTDFNEVIPALEQTAHSV---ERVDGEDDDADKPFFSLVSGTYKTSRSTAVDREATTYA---LTASENPN-ASTALQLKNERTELTTYHSEAADYLATREYQGLDPRIGKTPAHAAVEGSTGIARGYT 486
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: A0A2D4C173_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C173_PYTIN) HSP 1 Score: 99.0 bits (245), Expect = 1.990e-20 Identity = 64/146 (43.84%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 1 VTPFELEVALGHR-EWNGFYSTDFDDVPNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERS-LVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDY 432
VTP+EL++AL EW G + TDF +V L + ++ D D DRPFFSLVSGTY T AG S A GAG D D + AL +++ L+ + S AA+FLAQREY+GL+ +G+T A AV+G +GIA Y
Sbjct: 942 VTPYELQLALSDSDEWTGQFKTDFHEVLPLLDQASAELAEENGAESDDDKDRPFFSLVSGTYVT-AGRS----VATGAGDATDGDEDDGESSTALQVRNQKTDLITYHSEAAEFLAQREYRGLDPRIGETPAHAAVQGSTGIARGY 1082
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: A0A3M6VCQ7_9STRA (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCQ7_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.380e-19 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 1 VTPFELEVALGHRE-WNGFYSTDFDDVPNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERSLVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYT 435
VTP+EL++AL + W+G Y TDF +V E+ T + D D D+PFFSLVSGTYKT + A I AS + D + V L ++ S AAD+LA REYQGL+ +G+T A AV+G +GIA YT
Sbjct: 369 VTPYELQLALSPTDQWDGQYKTDFCEVIPAIESTTQSVEQGADGGEDDDADKPFFSLVSGTYKTSSRSIAIDHEATLYAITASEEPDVSTT--LQVKNEHTELTKYHSEAADYLATREYQGLDPRIGKTPAHAAVKGSTGIARGYT 512
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: A0A8K1C3Y9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3Y9_PYTOL) HSP 1 Score: 95.1 bits (235), Expect = 3.240e-19 Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 1 VTPFELEVALGHR-EWNGFYSTDFDDVPNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVA-GVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERS-LVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDY 432
+TPFEL++AL EW G + TDF +V L + T D D D+PFFSLV+GTYK+ VS+ ++ D + + AL ER+ L+++ S AA+FLA REY+GLE +G+T A AV+G +GIA Y
Sbjct: 373 ITPFELQLALSESDEWTGQFKTDFGEVLPLLDETTKELERKQDGEEDEDADKPFFSLVTGTYKSAGHSVSRATDST-------PADEEDGESTTALQVKNERTDLIQYRSEAAEFLAGREYRGLEPRLGETPAHAAVKGSTGIARGY 512
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: G4YLK0_PHYSP (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YLK0_PHYSP) HSP 1 Score: 94.7 bits (234), Expect = 4.280e-19 Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 1 VTPFELEVALG-HREWNGFYSTDFDDV-PNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERS-LVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYT 435
VTP+EL++AL EW+G Y TDF +V P L +T S D D D+PFFSLVSGTYKT + + A + AS + + A L ER+ L + S AAD+LA REYQGL+ +G+T A AVEG +GIA YT
Sbjct: 357 VTPYELQLALSPDEEWDGQYKTDFGEVIPALEKTAQSVEQAAGDSEGD-DADKPFFSLVSGTYKTSSRTTAVDREATTYALTASGEAAASTA---LQVKNERTELTTYHSEAADYLATREYQGLDPRIGKTPAHAAVEGSTGIARGYT 500
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Match: W2QVU3_PHYPN (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=11 Tax=Phytophthora TaxID=4783 RepID=W2QVU3_PHYPN) HSP 1 Score: 94.4 bits (233), Expect = 6.170e-19 Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 1 VTPFELEVALG-HREWNGFYSTDFDDV-PNLTETWTSTTTXXXXXXXDSDGDRPFFSLVSGTYKTVAGVSKYAEAAGGAGIGASLDHDPNNAGGALVGIGERS-LVEWSSPAADFLAQREYQGLEALVGQTEARPAVEGQSGIASDYT 435
VTP+EL++AL EW+G TDF +V P L +T S + + D+PFFSLVSGTYKT + + A + AS + D A GAL ER+ L + S AAD+ A REYQGL+ +G+T A AVEG +GIA YT
Sbjct: 379 VTPYELQLALSLSEEWDGQCKTDFSEVIPALDQTAQSV--EQAAVDGEDEADKPFFSLVSGTYKTASHSTAVDREATTYALTASGEPD---ASGALQVKNERTELTTYHSEAADYFATREYQGLDPRIGKTPAHAAVEGSTGIARGYT 521 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45955.11498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig45955.11498.1 >prot_H-paniculata_contig45955.11498.1 ID=prot_H-paniculata_contig45955.11498.1|Name=mRNA_H-paniculata_contig45955.11498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp VTPFELEVALGHREWNGFYSTDFDDVPNLTETWTSTTTKNNSDDNDSDGDback to top mRNA from alignment at H-paniculata_contig45955:691..1373+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig45955.11498.1 ID=mRNA_H-paniculata_contig45955.11498.1|Name=mRNA_H-paniculata_contig45955.11498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=683bp|location=Sequence derived from alignment at H-paniculata_contig45955:691..1373+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig45955:691..1373+ >mRNA_H-paniculata_contig45955.11498.1 ID=mRNA_H-paniculata_contig45955.11498.1|Name=mRNA_H-paniculata_contig45955.11498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig45955:691..1373+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |