mRNA_H-paniculata_contig4587.11485.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4587.11485.1
Unique NamemRNA_H-paniculata_contig4587.11485.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: D8LJJ4_ECTSI (Aurora kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJJ4_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 1.360e-159
Identity = 226/264 (85.61%), Postives = 242/264 (91.67%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQVTPRT*STRR 792
            GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRF+E V+ARY++QLVRAL+YLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYD RQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLG SPFRSES GADTLSRI+RGSY FP +P+VS EA+DFV +LL+VEP +RMTL +AV HPWL   VA     +  S+ +
Sbjct:  146 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFTESVSARYMFQLVRALQYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDTRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGHSPFRSESGGADTLSRIERGSYAFPKDPVVSAEAQDFVSRLLRVEPSERMTLDEAVRHPWLRDVVAEATAAKAASSAK 409
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: A0A8B7P137_HYAAZ (Aurora kinase n=2 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7P137_HYAAZ)

HSP 1 Score: 255 bits (652), Expect = 1.100e-79
Identity = 127/254 (50.00%), Postives = 175/254 (68.90%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQ 762
            GNVYLAREK S  ++ALK++ K  L+ A V HQ++ EI+I  +      +I+R YGYFYDE R+++++E+A KGELY+ M+ QP GRFSE  +A+YI Q+  ALKY H   VIHRDIKPEN+LL+  G+L++ DFGWS+  A    R T+CGT DYL PEM+  +P+   VDLW+ GV+ YEFL G  PF +ES+ A T  RI R  + FP  P VS +A+D + KLL+  P +R+ L + ++HPW+  Q AL+
Sbjct:   45 GNVYLAREKKSKYIVALKVLFKSQLQKASVEHQLRREIEIQAHLRH--QHILRLYGYFYDETRVYLILEFAPKGELYKYMQKQPNGRFSEMESAKYIRQMSEALKYCHSKKVIHRDIKPENILLNLKGDLKIADFGWSVH-APSSRRSTLCGTLDYLPPEMVENKPHDEKVDLWSLGVLCYEFLCGSPPFETESSSA-TYKRITRVQFSFP--PHVSPKARDLILKLLKYHPHERLPLDEVLKHPWIVEQAALE 292
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: A0A6P9AB51_THRPL (Aurora kinase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9AB51_THRPL)

HSP 1 Score: 253 bits (647), Expect = 8.320e-77
Identity = 127/256 (49.61%), Postives = 174/256 (67.97%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDI--HVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQ 762
            GNVYLAREK S  ++ALK++ K  L+ A V HQ++ EI+I  H+ +    PNI+R YGYF+DE+R+++++EYA  GEL+R ++ QP  RF E  AA YI QL  AL Y H   VIHRDIKPENLLL   G L++ DFGWS+  A    R T+CGT DYL PEM+  RP+   VDLW+ GV+ YEFL+G+ PF +E+   +T +RI R  Y FPD   VS+ A+D + KLLQ+ P +R++L   ++HPW+    +L+
Sbjct:  193 GNVYLAREKTSKFIIALKVLFKSQLQKANVEHQLRREIEIQSHLRH----PNILRLYGYFHDEQRVYLILEYAPNGELFRALQTQPLKRFDELRAAAYIQQLADALHYCHSKKVIHRDIKPENLLLGAKGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMVQGRPHDHKVDLWSLGVLCYEFLVGKPPFEAETY-EETYARISRAQYSFPDH--VSSSARDLITKLLQLNPNNRLSLEGVLDHPWIKESASLR 440
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: UPI001E670FEE (aurora kinase-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E670FEE)

HSP 1 Score: 247 bits (630), Expect = 4.290e-76
Identity = 126/256 (49.22%), Postives = 170/256 (66.41%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQVT 768
            GNVYLAREK+S  ++ALK++ K  L+ A V HQ++ EI+I  +     PNI+R YGYF+DE R+++++E+A +GELY+ M+AQP   F E+ +A+YI QL  ALKY H   VIHRDIKPENLLL   G+L++ DFGWS+  A    R T+CGT DYL PEM+  +P+   VDLW+ GV+ YEFL G  PF +ES   DT SRI +    FP    VS +AKD + KLL+  P DR++L   ++HPW+        T
Sbjct:   69 GNVYLAREKSSKYIVALKVLFKSQLQKANVEHQLRREIEIQAHLRH--PNILRLYGYFHDEVRVYLILEFAPRGELYKEMQAQPHRHFDEKRSAKYIMQLASALKYCHTKKVIHRDIKPENLLLSLRGDLKIADFGWSVH-APSSRRTTLCGTLDYLPPEMVEGKPHDEKVDLWSLGVLCYEFLCGNPPFEAES-NRDTYSRISKVDLIFPSH--VSDKAKDLMVKLLRHRPSDRLSLDGVLQHPWILESTKESAT 318
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: A0A0K2U0X9_LEPSM (Aurora kinase n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2U0X9_LEPSM)

HSP 1 Score: 246 bits (628), Expect = 9.690e-76
Identity = 123/249 (49.40%), Postives = 171/249 (68.67%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDI--HVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWL 741
            GNVYLAREK S  ++ALK+M K  L+ A V HQ++ EI+I  H+ +    P+I+R YGYFYDE R+++++E+A KGELY+ +K +P  RF E +AARYIYQ+  AL YLH   VIHRDIKPENLLLD  GNL++ DFGWS+  A    R T+CGT DYL+PEM+  R +   VDLW+ G++ +EFL+G+ PF +++   +T  +I     E+P    +S EA+D + KLLQ  P  R+ L + + HPW+
Sbjct:   65 GNVYLAREKKSKFIVALKVMFKNQLKKANVEHQLRREIEIQSHLRH----PHILRLYGYFYDETRVYLILEFASKGELYKLLKNEPLKRFEETLAARYIYQMSGALDYLHSKKVIHRDIKPENLLLDSKGNLKIADFGWSVH-APSSRRGTMCGTLDYLSPEMIEGRSHDEKVDLWSLGILCFEFLVGKPPFETDNQ-QETYKKITNVDIEWPS--FISPEARDLISKLLQKIPERRLPLKEVIVHPWI 305
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: A0A6J1S0H8_FRAOC (Aurora kinase n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1S0H8_FRAOC)

HSP 1 Score: 249 bits (637), Expect = 1.920e-75
Identity = 127/256 (49.61%), Postives = 170/256 (66.41%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDI--HVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQ 762
            GNVYLAREK S  ++ALK++ K  L+ A V HQ++ EI+I  H+ +    PNI+R YGYF+DE+R+++++EYA KGEL+R ++AQP  RF E   A YI QL  AL Y H   VIHRDIKPENLLL   G L++ DFGWS+  A    R T+CGT DYL PEM+  RP+   VDLW+ GV+ YEFL+G+ PF +E+   +T +RI R  Y FPD   VS  A+D + KLLQ+ P +R+ L   + H W+     L+
Sbjct:  184 GNVYLAREKTSKFIIALKVLFKSQLQKANVEHQLRREIEIQSHLRH----PNILRLYGYFHDEQRVYLILEYAPKGELFRALQAQPLKRFDELRTAAYIQQLADALHYCHSKKVIHRDIKPENLLLGAKGELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMVQGRPHDHKVDLWSLGVLCYEFLVGKPPFEAETY-EETYARISRAQYSFPDH--VSQSARDLISKLLQLNPNNRLPLEGVLRHSWITESEMLR 431
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: A0A0D2WHA4_CAPO3 (Aurora kinase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WHA4_CAPO3)

HSP 1 Score: 247 bits (630), Expect = 2.360e-75
Identity = 127/261 (48.66%), Postives = 176/261 (67.43%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDI--HVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQVTPRT 777
            GNVYLAREK+S  ++ALK++ K  L+  GV HQ++ E++I  H+ +    PNI+R YGYF+DEKR+++++EYA +GEL++ ++ +   RFSE   A YI QL RALKY HG NVIHRDIKPEN+LL   G+L++ DFGWS+  ++   R T+CGT DYL PEM+    Y   VDLW+ GV+ YEFL+G  PF +E   + T  RI+RG   FP    VS  A+DF+ KL+++ P +RM L QA+ HPW+         PR+
Sbjct:  116 GNVYLAREKSSKYIVALKVLYKNQLQRIGVEHQLRREVEIQSHLRH----PNILRMYGYFHDEKRVYLILEYAPRGELFKELRKEQ--RFSEPRTASYILQLARALKYCHGKNVIHRDIKPENVLLGLRGDLKIADFGWSVHTSN--RRDTLCGTLDYLPPEMVDRGDYDYRVDLWSLGVLCYEFLVGSPPFYAEDEPS-TYLRIRRGDLVFPS--TVSAGARDFMSKLMRLNPSERMPLEQAMVHPWILEMTDPNNQPRS 365
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: UPI001C450C32 (aurora kinase-like n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C450C32)

HSP 1 Score: 244 bits (623), Expect = 5.450e-75
Identity = 126/259 (48.65%), Postives = 172/259 (66.41%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWL--WPQVALQVTP 771
            GNVYLAREK+S  ++ALK++ K  L+ + V HQ++ EI+I  +     PNI+R YGYF+D  R+++++EYA +GELY+ M+AQP  RF E+ +A+YI QL  ALKY H   VIHRDIKPENLLL   G+L++ DFGWS+  A    R T+CGT DYL PEM+  + +   VDLW+ GV+ YEFL G+ PF +ES  +DT  RI      FP    VS +AKD + KLL+  P DR++L   ++HPW+  W +    V P
Sbjct:   73 GNVYLAREKSSKFIVALKVLFKSQLQKSNVEHQLRREIEIQAHLRH--PNILRLYGYFHDAVRVYLILEYAPRGELYKEMQAQPHSRFDEKRSAKYIMQLANALKYCHTKKVIHRDIKPENLLLSLRGDLKIADFGWSVH-APSSRRTTLCGTLDYLPPEMVEGKAHDEKVDLWSLGVLCYEFLCGKPPFEAES-NSDTYKRICSVDLRFPSH--VSDKAKDLMVKLLRHSPRDRLSLDGVLQHPWIGQWTEDRSTVPP 325
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: UPI001C9BF87E (aurora kinase C-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BF87E)

HSP 1 Score: 246 bits (629), Expect = 6.070e-75
Identity = 125/247 (50.61%), Postives = 168/247 (68.02%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWL 741
            GNVYLAREK S  V+A+K++ K  ++ A V HQV+ EI+I  +     PNI+R YGYF+DE+RI++++EYA  GELY+ + AQP  RFSEE  A YIYQL  ALKY H   VIHRDIKPENLLL   G L++ DFGWS+  A    R T+CGT DYL+PEM+  + ++ +VDLW  GV+ YE L+G  PF +++   +T  +I++  Y+FP    VS  A+DF+ KLL +EP  RM L   + HPW+
Sbjct:  147 GNVYLAREKKSKYVVAMKVLFKTQIQQADVEHQVRREIEIQTHLRH--PNILRMYGYFHDERRIYMILEYAPGGELYKHLSAQPDKRFSEEQTANYIYQLADALKYCHSKGVIHRDIKPENLLLGTQGELKIADFGWSVH-APSSRRHTMCGTLDYLSPEMVAGKTHSHTVDLWGVGVLCYECLVGTPPFIAQTY-EETYLKIKKAQYKFPSH--VSEGARDFISKLLVIEPAHRMPLDGILTHPWI 387
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BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Match: F2UGX7_SALR5 (Aurora kinase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UGX7_SALR5)

HSP 1 Score: 243 bits (620), Expect = 8.330e-75
Identity = 123/253 (48.62%), Postives = 169/253 (66.80%), Query Frame = 1 
Query:    1 GNVYLAREKASMKVLALKIMLKKDLEAAGVYHQVKSEIDI--HVNYGSGCPNIVRCYGYFYDEKRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLNVIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEMLMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFPDEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQV 753
            GNV+LAREK S  ++ALK++ K  L+   V HQ++ E++I  H+ +     NI+R +GYF+DE R+++++EYA KGELY+ +  Q   RF E  +A YI+QL  ALKY H  +VIHRDIKPENLLL     L++ DFGW++  A    R+T+CGT DYL PEM+ + P+  +VDLW+ GV+TYEFL G  PF +E    +T  RI      FP+   VS EAKDFV KLL+  P +RM+LA A++HPW+   V
Sbjct:   58 GNVFLAREKKSKFIVALKVLFKSQLQKHNVEHQLRREVEIQSHLQH----KNILRLFGYFHDEHRVYLILEYAAKGELYKIL--QERSRFDERTSADYIFQLTNALKYCHRKSVIHRDIKPENLLLGLENTLKIADFGWAVH-APSSRRKTLCGTLDYLPPEMIRQEPHDATVDLWSLGVLTYEFLFGNPPFEAEGH-TNTYKRITSVDLRFPEHIPVSAEAKDFVKKLLRRRPSERMSLADALQHPWITKNV 302
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4587.11485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJJ4_ECTSI1.360e-15985.61Aurora kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
A0A8B7P137_HYAAZ1.100e-7950.00Aurora kinase n=2 Tax=Hyalella azteca TaxID=294128... [more]
A0A6P9AB51_THRPL8.320e-7749.61Aurora kinase n=1 Tax=Thrips palmi TaxID=161013 Re... [more]
UPI001E670FEE4.290e-7649.22aurora kinase-like n=1 Tax=Procambarus clarkii Tax... [more]
A0A0K2U0X9_LEPSM9.690e-7649.40Aurora kinase n=1 Tax=Lepeophtheirus salmonis TaxI... [more]
A0A6J1S0H8_FRAOC1.920e-7549.61Aurora kinase n=2 Tax=Frankliniella occidentalis T... [more]
A0A0D2WHA4_CAPO32.360e-7548.66Aurora kinase n=2 Tax=Capsaspora owczarzaki (strai... [more]
UPI001C450C325.450e-7548.65aurora kinase-like n=1 Tax=Homarus americanus TaxI... [more]
UPI001C9BF87E6.070e-7550.61aurora kinase C-like n=1 Tax=Venturia canescens Ta... [more]
F2UGX7_SALR58.330e-7548.62Aurora kinase n=1 Tax=Salpingoeca rosetta (strain ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4587contigH-paniculata_contig4587:242..6179 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score443.4
Seed ortholog evalue7.2e-122
Seed eggNOG ortholog2880.D8LJJ4
Preferred nameALK1
KEGG koko:K08794,ko:K08850
KEGG Pathwayko04921,ko04925,map04921,map04925
Hectar predicted targeting categoryother localisation
EggNOG free text desc.histone serine kinase activity
EggNOG OGsKOG0580@1,KOG0580@2759
Ec32 ortholog descriptionAurora-like Serine/threonine protein kinase
Ec32 orthologEc-17_002210.1
EC2.7.11.1,2.7.11.17
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03036
Exons7
Model size1120
Cds size747
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930372.4416265-UTR-H-paniculata_contig4587:241..2741622930372.4416265-UTR-H-paniculata_contig4587:241..274Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4587 242..274 +
1691481262.424809-UTR-H-paniculata_contig4587:241..2741691481262.424809-UTR-H-paniculata_contig4587:241..274Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4587 242..274 +
1622930372.5661373-UTR-H-paniculata_contig4587:5839..61791622930372.5661373-UTR-H-paniculata_contig4587:5839..6179Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4587 5840..6179 +
1691481262.5231538-UTR-H-paniculata_contig4587:5839..61791691481262.5231538-UTR-H-paniculata_contig4587:5839..6179Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4587 5840..6179 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930372.4598844-CDS-H-paniculata_contig4587:274..3191622930372.4598844-CDS-H-paniculata_contig4587:274..319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 275..319 +
1691481262.4444041-CDS-H-paniculata_contig4587:274..3191691481262.4444041-CDS-H-paniculata_contig4587:274..319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 275..319 +
1622930372.4764574-CDS-H-paniculata_contig4587:1110..12201622930372.4764574-CDS-H-paniculata_contig4587:1110..1220Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 1111..1220 +
1691481262.4558496-CDS-H-paniculata_contig4587:1110..12201691481262.4558496-CDS-H-paniculata_contig4587:1110..1220Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 1111..1220 +
1622930372.4925978-CDS-H-paniculata_contig4587:2321..25151622930372.4925978-CDS-H-paniculata_contig4587:2321..2515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 2322..2515 +
1691481262.468519-CDS-H-paniculata_contig4587:2321..25151691481262.468519-CDS-H-paniculata_contig4587:2321..2515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 2322..2515 +
1622930372.5078485-CDS-H-paniculata_contig4587:3657..37371622930372.5078485-CDS-H-paniculata_contig4587:3657..3737Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 3658..3737 +
1691481262.4828885-CDS-H-paniculata_contig4587:3657..37371691481262.4828885-CDS-H-paniculata_contig4587:3657..3737Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 3658..3737 +
1622930372.522226-CDS-H-paniculata_contig4587:4620..47331622930372.522226-CDS-H-paniculata_contig4587:4620..4733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 4621..4733 +
1691481262.4934728-CDS-H-paniculata_contig4587:4620..47331691481262.4934728-CDS-H-paniculata_contig4587:4620..4733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 4621..4733 +
1622930372.5347424-CDS-H-paniculata_contig4587:5350..54531622930372.5347424-CDS-H-paniculata_contig4587:5350..5453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 5351..5453 +
1691481262.5033176-CDS-H-paniculata_contig4587:5350..54531691481262.5033176-CDS-H-paniculata_contig4587:5350..5453Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 5351..5453 +
1622930372.5506332-CDS-H-paniculata_contig4587:5737..58391622930372.5506332-CDS-H-paniculata_contig4587:5737..5839Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 5738..5839 +
1691481262.5134528-CDS-H-paniculata_contig4587:5737..58391691481262.5134528-CDS-H-paniculata_contig4587:5737..5839Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4587 5738..5839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4587.11485.1prot_H-paniculata_contig4587.11485.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4587 275..5839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4587.11485.1

>prot_H-paniculata_contig4587.11485.1 ID=prot_H-paniculata_contig4587.11485.1|Name=mRNA_H-paniculata_contig4587.11485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp
MKVLALKIMLKKDLEAAGVYHQVKSEIDIHVNYGSGCPNIVRCYGYFYDE
KRIFIVMEYARKGELYRTMKAQPGGRFSEEVAARYIYQLVRALKYLHGLN
VIHRDIKPENLLLDKAGNLRLCDFGWSIEVADYDMRQTICGTQDYLAPEM
LMERPYTTSVDLWAAGVVTYEFLLGRSPFRSESAGADTLSRIQRGSYEFP
DEPMVSTEAKDFVGKLLQVEPGDRMTLAQAVEHPWLWPQVALQVTPRT*
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mRNA from alignment at H-paniculata_contig4587:242..6179+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4587.11485.1 ID=mRNA_H-paniculata_contig4587.11485.1|Name=mRNA_H-paniculata_contig4587.11485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5938bp|location=Sequence derived from alignment at H-paniculata_contig4587:242..6179+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAAACGTCTACCTCGCCCGTGAAAAGGCTTCTATGAAAGTCCTGGCGCT
AAAGATCATGCTCAAGAAGGACCTCGAGGTATGTCTGTATAGCATGCGTG
ATACGTTTGTGTGGTTTAGTGCACGATTCGGTTAGCCACGGGGGGCGGTA
GGCAGGGGGGTACTCCGAGAGGATGAGTCGTACTGACTAAACTCAGCTGG
CGTGTGAAACTGTGAAATGGGGCATGGCTACTGTACAAGTGTATGCACCG
AGGGGTATTCCGATGAAAAAAATAAATAAATAACGGGGAAAAAAAAAAAA
AGTCGTGATACTCGAGTTCTACCATTTTTCGGACACACTATTTTTTTGTT
GGTGTGGAGAAGATCCTGATTATTTTCCCAACAAGGCTGTCCCGTTTGTA
AGAAACAGAAACAACAGATACGGGTGACGTCACGGCCGCTGGGTGTTGTT
GGTCTGTGAGTGAGTTGCCTTTAGCTCTTTCTCCGTGCATGATGAGAGTT
TCTTGCTGTTGTGTTTTCCGCCCTCGTGTTTTTAGCTGCTTCGTTTTGGT
TGTCCGTACCTCGGATTTTTTCATGTTCCAATGGCCCATGCTTATAGTTT
GTAGCACCCCGCTGGTCTGATGATCTGCTCCTTCCCTCCCGTCATGCAGG
CTCCTTTCTGCTTTCAACTATGTGGTCTGTCGTGGTGTTTTTTCGCGTTT
TGTGTCATTTTTTAAGATGATAATTAACAGTCTTGAGGGAGAAAATGCTC
TTGTAATATTTTACGCATGTACATCAAAATTACAGACATGAACTGCAACT
CGTGATACCAGCGATGGTGTTTCAAGCCGTCAGTGTGCTGTACTCTGATT
CCCTCGCGCACGGTGGCAGGCTGCTGGTGTGTACCACCAGGTGAAGTCCG
AGATCGATATCCACGTCAACTATGGATCGGGTTGCCCGAACATCGTACGC
TGCTACGGCTACTTTTATGACGAAAAAAGGTGGGGAATTCGAAATGGAAT
AGGATGATGCGTTTGCTGAAGAAGAAATCGGGCACGGGGGAAGAGCGCTA
TGGATCTGCGCAGTAACCCATTTTGCGCGACATTTTAGCTCTCACATGGC
GCGATTTGTCAAGCCTTTTAGCGTTACGTGTATACCTTCGCTTATCACAC
CACTACACGGTATCACTTTGAGCGCGATAGGCTGCTCCATTTTAGCGTAT
TATACATGTAGAATGTTCCTTCGGCGCAATGTGTTAACCCATTTAGCGCT
ACACGCGTGACCCCTTTGGAAGGTGGAGGTTTGACCGTTTTCTAGCGCCG
ACAGAGGTGATTCGTTTAGCGTGGCTGATATCGTTTTTGTGCGTTATCAT
TTTGCTTTTGGCGATAGAACGAACTACTGGCTATGGTAACATCTCTCGAA
GGCATCCCGTGAGGCGAAATGAACACTAACGAAACGTGAATAACCTTGCT
GTTATTTTGCCTTTTTTTTAGTTAAATTTTTTTTGTCCTGGAGCCAGGTA
TCGTTTTTACATATTTTTTATTCCTTGAAGTATGGTGAGATGGTTGTGTT
GGTTGAGTTTCCGGAACAGTTTTCAAGTCTGTACTCGAGTGACTCCTGAG
AACTGGATCTTTGTGCAAGTGTATCGAGCTTGCAGCGAGCGTCGCGAGTG
CACTGGTCGAGTATAAGCACGAACTGCACGGGTTTAGTCGTGGGTGTACT
TGCACTGGATGAGCAGCTCATTTGGTGTTTAATGCTCCACTAAAACTGGC
CAAATAAAGGATGACAGACGATACTTGAAAGGTCAGTTTGCTGAAAATTC
TGATTTTATCAGGCCGTAACAGGACGTTGGTAAGGATTTACTTTCAATTT
CTAAAACGTTTTTTGTTATAAGGCAATTCACATTATATCTTGTGTGCATA
TTGACAATTGGATAACATTATTTTTCCGTTATTTCCTTCTTTCATCGTTG
GTTAAAACCCACAAAGATGTATATAAATAAAACATGAAAAAAAATCCTCA
CAGGTAAACGTCTGACTCGTGCAACGTTGCAAGCTAACTTCGTGTGTATT
TTACCTGTTCCTTTTATATGTATATATCAGAATCTTCATAGTCATGGAGT
ACGCCCGCAAGGGAGAGCTGTACCGCACGATGAAAGCTCAACCAGGAGGA
CGTTTCTCGGAAGAGGTGGCTGCGAGATACATCTACCAGCTTGTCCGGGC
GCTCAAGTACTTGCATGGACTCAACGTAATTCACAGAGATATCAAGCCGG
AGAACTTGCTCCTGGACAAGGCTGGTAAGTGACTGGAGGGAGGGTAGTGG
TGATGTTGTCGTTTTTGTCGAAGATGTCAATAGTTCACCCCCCGGGGATA
CGTACGAAGTATTCGCCCGAGTTTCAAAACAAGCTTGTGTATTCTGTGTG
GCCCGGACTATCCACGACTTCTAATAATACTTGATGTTTCGAATATACAG
GGGTGGGTACTTTATTCCATGTGTCCGTTCATTCTGAAACTCAGGCGAAT
GCTTTTCTGCTTTTTGTGAAAAGCATTGGCAAGTATTCGTATTTGTCCCC
AGCAGGTGTATGGTTTGCAGACGTGGCTGCGGAGTGTTATTCCTCCTGAA
TGGGTGCGAGTAAGAACGCTTGGAATTGTCAAAAGGAGATTTGTAATGAA
GCTTTCCTCTGAGTATTCATATATTGGCGTTTTTCGTTTTTTTTTTGTTT
TTTTTTTAACATTGCAATTTAAGATTGTCGAGGGACGCACAAAAAGAACG
CTCTCGTGCTGAATTACCCCCTGCGGCTAATACTGAATACCTTGCAATTT
ATTCGTGCGGGGGATGAGACATGTGGATCTGGTGTTCTCATGTGACGCTG
GAGTTTTTACGGGTGCTGTGATTATGCGAGCCTCCGTCCTCGACATGAAA
CATGGCGTGCTTGGAGTTTGGTTCGAAAACGTGTGTCGATTGAAGTGTAA
TCAATGCTAATGAGACGTTTATTGTTTCGTGTGTATCTTGAATCCGTTTG
AAATGTGAGGCTTGAAGAAAGGGTCACCTGTTCGATGTTACCGTTGGGAT
TTCTGTCCTCAGCCCGTTGTCCAGCGTAGCAGGCACAATATCCGGCGTGT
GGCCACTCTACGGGTAGGGTAAACAGGGAACATTCTTGTTTTTCTTCACT
AACGTTGGACTCAAAAAAAAGAAAAAATGCGGCGTTTTTTTTTTTTTAAG
ATTTGGGTCGGGTGGAAATAATTGCACGCCTTTACCATGTTGCTTCACCT
CTGCTGCTATCGAAGTAAGCAAAAAAACATGACAGCCTTGAGATCGTTTT
TTTTTTTATCGATCATGTCTACACGCCTAAGGTCCTTTTGAATGATAGTT
GGTGACTTGAGTACTACGTATCTATATTTTTTTACACACCTGGTGTTGTG
ATTTCATGGTTGTCAGGGAACCTGAGGCTCTGTGACTTCGGATGGTCCAT
TGAGGTGGCGGACTACGACATGCGTCAAACGATCTGCGGCACACAGGTAA
ATGATGTATGTATTACGACACACACGCACACACATACATATTTCCTCTTG
TCAACTTTTTGTGTAGTGTCTTTGTTTCGCCGTGGTGTGGGAAGCATTCG
CAGGGTTCATGGGGTTCCAAAACCATGATCTCTACATATCCATGAGCGGT
GGATTTTCCTTTTTTTTTTTTTTGTTCTGCTAATGGGGAGAGCACGTTCC
TGATGTTCCTGGGGTTCCTGAACCCTGCCCCCCTTCAAAACGACTAATGG
TATTTTGTCCCCCTCTCGGATCAGCTTTCTATCTGTGTCCGACCCTGGAT
GGGCAGTCCATCTACGACAGAACAACACCCAAGTGCTTGCTCCGCACGGA
ATCCCAAGACTTGGAACCGACCTGCATAGAGCAGGCGGTGGGTGTTCCCT
CGAGAGTCAGTCTCTCTCGGGAGCATCGTGTTCTCACATCTACGTTTTTT
TGACGGCCTGTTCCTACATGTACGAAATTCAGAATAAGCAGGAAAATGTA
TACAGTAGTACTTTCTAGTCAAACCTTTAGATTGTGGGAGACGAATGAGG
GGACTGGAAATCCGGCTGCTCGATTTACGTTGTCCCTTCTAGCCCGTCGA
TTTTATCATGGACGTTAAGTAGAGATGATGACAGTAGACGCTGCGGATTT
TAGCGTTTTTCGGTCGGCATTGGAGTATGATTTTTTGTTTAGCTATAATA
CATTCCTATCTGACTTTTTTTTTCATCCTTGCATCGAAATTTTTTATGAT
TAGTGTTGCTAGTAGTATCAATAGCATTAGCGTTGCTGTAGTAATAACTC
ACTCTGAGACTGCCAACGGTGATATTTTGTACATGTATTCGTGTGTGTGT
GTGTGTGTGTTTCCCTCTCATTTCTGCAGGACTATCTAGCCCCCGAAATG
CTGATGGAACGACCGTACACAACATCAGTAGACCTGTGGGCTGCGGGTGT
CGTCACGTACGAGTTTCTGCTAGGTCGATCTCCGTTCCGGAGGTGAGATG
CGGTCTGGTCCGGTATGATGTTTAAATATATATACATTTTTTTTTTTCTT
CTGATTTTTGTCTTGAACTGGTTCAATTTTGCGCGCGATTTTTTTAATTC
AGGCTGTTTCATGCTGTACCCTCGAAACGCCCAAACGAGAAGGGTTTTGT
GTGTTCTGTTATTTTTGTGGTATTTTATTGTTGCTGCGGGATCATATAGG
TGGATTGGTCAACCATAGGACCAATTTGCCCATCGGCTATCGGGCAACCA
CACTTTAATTTGGTTTCTTTGGTTACTCCTGCTATCTTGGGTGTGATATT
TGTGTCGGTCACGCTAGTCGCGAGTCCATCCTATACTTGTATCGTCTCGT
TGTGTATTTTTCCCCGTACGTGTGTACACGTATGCGGCGACGCTTGTTTT
GATTTTATAATTAACAATCGCTTTTGACTGCGAAAGAGGGGATACCCCAA
TTATAGAACGACGTTGTATCTCTCTTTCTCTCTCTCACAGAAACAGACAC
ATAGACATGAACATCATCCCGTCCCATCTGCTGTTGGCGATACTACTTGT
GATTGGTGGCTGTGGTACTGGCGATATTGTTCTGTGCCCCGTTTTGTTGT
GATTGGCAGCGAGTCGGCCGGAGCGGATACCCTCTCTCGGATCCAGCGTG
GCTCGTACGAGTTTCCCGATGAGCCCATGGTATCAACTGAAGCGAAGGAT
TTCGTCGGAAAGGTACGGGTGATTTTGAGACAGCGTGGTACTTGGCCATC
GCTAGATATATATATTTTGTCAAGCTAAAGTATATAGGGTGTGGATAGTT
GCCGAATGGACCAAGCTGTTGCAAGGAGCACTTATCTACCTTTTGCAAAG
ATCCATTTTACAACTAACCCTAGCGACAAACGTGAAGGGATCGTCCAATT
TTACACATATCTAATCGTAATATATCTCTCTTTGACTCTTCACTATATCG
CCTGCTTTGCTGCTTTTTCGCGTTTTTGGAACATGACTATATTTAGCTTC
TCCAGGTGGAGCCCGGGGATCGGATGACATTGGCCCAGGCTGTCGAACAC
CCTTGGCTGTGGCCTCAGGTAGCGCTACAAGTAACGCCGCGCACATGAAG
CACGCGGCGGGATTAAAATATGAACGAGGGAGGAGAAAAAGGCTCCATTC
ACCGTCCGGGACTTCAGGCCAACGGCGACCTCCTCTCTTCTTCGCCTCGG
AGTCCATTTGTTCAAACTCCCGAGGGCTGTAACCTGATGATGGGTGGCCG
TAAAGAAGCATGGTAGGCGAACGACACGGGACGCGGAAGGGAACAGTTCG
AGGAACAGGATGGAATGAAACGGGTAGCGACCAGTACACACGACGCACAT
GATATACAAGAACGGCGCGAATTCAATCGGCACGGAAGGCAAAAGGGGGT
GGACAACACTGCAGATACTCACGGCGGGGGACTGGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig4587:242..6179+

>mRNA_H-paniculata_contig4587.11485.1 ID=mRNA_H-paniculata_contig4587.11485.1|Name=mRNA_H-paniculata_contig4587.11485.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig4587:242..6179+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGTCCTGGCGCTAAAGATCATGCTCAAGAAGGACCTCGAGATGAA
AGTCCTGGCGCTAAAGATCATGCTCAAGAAGGACCTCGAGGCTGCTGGTG
TGTACCACCAGGTGAAGTCCGAGATCGATATCCACGTCAACTATGGATCG
GGTTGCCCGAACATCGTACGCTGCTACGGCTACTTTTATGACGAAAAAAG
GCTGCTGGTGTGTACCACCAGGTGAAGTCCGAGATCGATATCCACGTCAA
CTATGGATCGGGTTGCCCGAACATCGTACGCTGCTACGGCTACTTTTATG
ACGAAAAAAGAATCTTCATAGTCATGGAGTACGCCCGCAAGGGAGAGCTG
TACCGCACGATGAAAGCTCAACCAGGAGGACGTTTCTCGGAAGAGGTGGC
TGCGAGATACATCTACCAGCTTGTCCGGGCGCTCAAGTACTTGCATGGAC
TCAACGTAATTCACAGAGATATCAAGCCGGAGAACTTGCTCCTGGACAAG
GCTGAATCTTCATAGTCATGGAGTACGCCCGCAAGGGAGAGCTGTACCGC
ACGATGAAAGCTCAACCAGGAGGACGTTTCTCGGAAGAGGTGGCTGCGAG
ATACATCTACCAGCTTGTCCGGGCGCTCAAGTACTTGCATGGACTCAACG
TAATTCACAGAGATATCAAGCCGGAGAACTTGCTCCTGGACAAGGCTGGG
AACCTGAGGCTCTGTGACTTCGGATGGTCCATTGAGGTGGCGGACTACGA
CATGCGTCAAACGATCTGCGGCACACAGGGAACCTGAGGCTCTGTGACTT
CGGATGGTCCATTGAGGTGGCGGACTACGACATGCGTCAAACGATCTGCG
GCACACAGGACTATCTAGCCCCCGAAATGCTGATGGAACGACCGTACACA
ACATCAGTAGACCTGTGGGCTGCGGGTGTCGTCACGTACGAGTTTCTGCT
AGGTCGATCTCCGTTCCGGAGGACTATCTAGCCCCCGAAATGCTGATGGA
ACGACCGTACACAACATCAGTAGACCTGTGGGCTGCGGGTGTCGTCACGT
ACGAGTTTCTGCTAGGTCGATCTCCGTTCCGGAGCGAGTCGGCCGGAGCG
GATACCCTCTCTCGGATCCAGCGTGGCTCGTACGAGTTTCCCGATGAGCC
CATGGTATCAACTGAAGCGAAGGATTTCGTCGGAAAGCGAGTCGGCCGGA
GCGGATACCCTCTCTCGGATCCAGCGTGGCTCGTACGAGTTTCCCGATGA
GCCCATGGTATCAACTGAAGCGAAGGATTTCGTCGGAAAGCTTCTCCAGG
TGGAGCCCGGGGATCGGATGACATTGGCCCAGGCTGTCGAACACCCTTGG
CTGTGGCCTCAGGTAGCGCTACAAGTAACGCCGCGCACATGACTTCTCCA
GGTGGAGCCCGGGGATCGGATGACATTGGCCCAGGCTGTCGAACACCCTT
GGCTGTGGCCTCAGGTAGCGCTACAAGTAACGCCGCGCACATGA
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