prot_H-paniculata_contig4578.11471.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4578.11471.1
Unique Nameprot_H-paniculata_contig4578.11471.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig4578.11471.1 vs. uniprot
Match: D8LKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS0_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 3.900e-33
Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0
Query:    2 ELCKEFRLEEICSLEKVFVLGAHGTKCYVLLRGLARVLIRHEDAITGDISLLTQANLGPGDVVGENVLEGVPFRSNTIIAVTDCQFAVIDASDYAKVR 99
            E+CK  RLEE+ SL+KV+V GAHGTKCYVLLRGLARVL   ED  TG +  +  A+LGPGD+ G++VL GVP R N+++AVTDC+FAV+D SDY  V+
Sbjct:  519 EVCKHMRLEEVRSLDKVYVHGAHGTKCYVLLRGLARVLQPEEDPNTGVVRYVPDADLGPGDLFGDDVLRGVPKRPNSVVAVTDCEFAVLDESDYTTVK 616          
BLAST of mRNA_H-paniculata_contig4578.11471.1 vs. uniprot
Match: A0A835Z9P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.310e-16
Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    1 MELCKEFRLEEICSLEKVFVLGAHGTKCYVLLRGLARVLIRHEDAITGDISLLTQANLGPGDVVGENVLEGVPFRSNTIIAVTDCQFAVIDASDYAKVR 99
            ++LC+  +LE++ S+E +F   + G+K Y++L GL R+L R  D  TG   L+  ++L PGDV+G+ VL+GV  R +T +AV+      +D  DY +VR
Sbjct:  876 LDLCRHMQLEQVESMETIFAAESQGSKAYLVLTGLVRLLERVVDDSTGTARLVYHSDLCPGDVLGDGVLDGVRTRHHTAVAVSRATLLSVDVEDYLRVR 974          
BLAST of mRNA_H-paniculata_contig4578.11471.1 vs. uniprot
Match: A0A1R2C6E6_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C6E6_9CILI)

HSP 1 Score: 55.8 bits (133), Expect = 6.340e-7
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0
Query:    2 ELCKEFRLEEICSLEKVFVLGAHGTKCYVLLRGLARVLIRHEDAITGDI-SLLTQANLGPGDVVGENVLEGVPFRSNTIIAVTDCQFAVIDASDYAKV 98
            + CK    E + + E VF  G  G K Y++L G+A+V++     I  DI +++T A L  G   GE  L     RS +I+   DC FAV+   DY K+
Sbjct:   73 DCCKAMMYEFVPNGEYVFKCGEKGNKFYIILEGIAKVIV---PIIKDDIVNMITVAQLYSGMAFGELALIKDQPRSASILCAKDCHFAVLVKEDYLKI 167          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4578.11471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKS0_ECTSI3.900e-3362.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9P8_9STRA2.310e-1639.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1R2C6E6_9CILI6.340e-735.71Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 1..99
e-value: 2.3E-14
score: 55.1
IPR000595Cyclic nucleotide-binding domainPFAMPF00027cNMP_bindingcoord: 17..96
e-value: 1.3E-8
score: 34.7
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 1..99
score: 12.756
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 2..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4578contigH-paniculata_contig4578:7059..8229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4578.11471.1mRNA_H-paniculata_contig4578.11471.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4578 7053..8229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4578.11471.1 ID=prot_H-paniculata_contig4578.11471.1|Name=mRNA_H-paniculata_contig4578.11471.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MELCKEFRLEEICSLEKVFVLGAHGTKCYVLLRGLARVLIRHEDAITGDI
SLLTQANLGPGDVVGENVLEGVPFRSNTIIAVTDCQFAVIDASDYAKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like