prot_H-paniculata_contig45770.11470.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45770.11470.1
Unique Nameprot_H-paniculata_contig45770.11470.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length130
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45770.11470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 17..40
e-value: 11.0
score: 13.0
coord: 41..64
e-value: 0.0011
score: 28.3
coord: 89..112
e-value: 0.78
score: 18.8
coord: 65..88
e-value: 0.0013
score: 27.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..130
e-value: 8.7E-37
score: 128.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 20..77
e-value: 2.5E-13
score: 49.6
NoneNo IPR availablePANTHERPTHR45842FAMILY NOT NAMEDcoord: 2..129
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45770contigH-paniculata_contig45770:455..844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45770.11470.1mRNA_H-paniculata_contig45770.11470.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45770 437..844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45770.11470.1 ID=prot_H-paniculata_contig45770.11470.1|Name=mRNA_H-paniculata_contig45770.11470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
MEDNYFTTLPEEAFEGMMALEDLSFAFCNLKSLPEGIFQDLSSLKYMYFN
YNELSTLPEGIFQGLTSLEELILGNNYFRTFPDGIFDDLVSLENLWIANN
DLISLSDGIFNGLESLVELTITGNSLDCLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt