mRNA_H-paniculata_contig11799.1145.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: D8LN04_ECTSI (Myosin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN04_ECTSI) HSP 1 Score: 358 bits (920), Expect = 2.640e-118 Identity = 183/212 (86.32%), Postives = 198/212 (93.40%), Query Frame = 1 Query: 1 VAAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRDEVPPALHDLVLSSNDR 636 VAA ARDAVAKALYS+LFDWLVEKINLTLTAAMNSKT + SNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEE+EF+ +GLS+VYVE CRVEFADNDDVLRLLEG+P G+LSLLKEESTLKTGTGL+LGKRYRQ F NDRFA+PRARGG++ GTEA FG+VHFAGEVIYD+TEFVEKN+DEVP ALHDLVLSSNDR Sbjct: 420 VAASARDAVAKALYSSLFDWLVEKINLTLTAAMNSKTAAN-TSNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEEEFAKQGLSKVYVEHCRVEFADNDDVLRLLEGKPQGILSLLKEESTLKTGTGLKLGKRYRQAFKGNDRFALPRARGGSRAGTEATFGIVHFAGEVIYDATEFVEKNKDEVPTALHDLVLSSNDR 630
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A6H5JIF4_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF4_9PHAE) HSP 1 Score: 359 bits (922), Expect = 2.660e-111 Identity = 183/212 (86.32%), Postives = 198/212 (93.40%), Query Frame = 1 Query: 1 VAAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRDEVPPALHDLVLSSNDR 636 VAA ARDAVAKALYS+LFDWLVEKINLTLTAAMNSKT + SN+FIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEE+EF+ +GLS+VYVE CRVEFADNDDVLRLLEG+P G+LSLLKEESTLKTGTGL+LGKRYRQ F NDRFA+PRARGGN+ GTEA FG+VHFAGEVIYD+TEFVEKN+DEVP ALHDLVLSSNDR Sbjct: 350 VAASARDAVAKALYSSLFDWLVEKINLTLTAAMNSKTAAN-TSNKFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEEEFAKQGLSKVYVEHCRVEFADNDDVLRLLEGKPQGILSLLKEESTLKTGTGLKLGKRYRQAFKGNDRFALPRARGGNRAGTEATFGIVHFAGEVIYDATEFVEKNKDEVPTALHDLVLSSNDR 560
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A835YVE9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE9_9STRA) HSP 1 Score: 238 bits (608), Expect = 1.930e-71 Identity = 134/209 (64.11%), Postives = 153/209 (73.21%), Query Frame = 1 Query: 13 ARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASN-RFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRDEVPPALHDLVLSSNDR 636 ARDAVAKA+Y+A F WLV K+ L A ++ GD +S+ +FIG+LDIFGFEAFGTNSLEQLLINYANERLQQQFN FVFKLEE+EF EGLS VYV++CRVE+ DN ++L LLE +P GLLSLL EE+TLK GT L KRYRQ F F G EA+FGV HFAGEV Y T FVEKNRD VP AL DLVL S+DR Sbjct: 424 ARDAVAKAIYAAAFSWLVGKLTLPRCAVCSAY--GDSSSDTQFIGILDIFGFEAFGTNSLEQLLINYANERLQQQFNFFVFKLEEQEFQAEGLSAVYVDECRVEWTDNSEILSLLEAKPMGLLSLLNEEATLKNGTSENLVKRYRQGFDGAPCFCNRMPVRGGATLDEAIFGVRHFAGEVYYTVTGFVEKNRDAVPVALADLVLDSSDR 630
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A7I8K2M4_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K2M4_SPIIN) HSP 1 Score: 174 bits (440), Expect = 1.930e-46 Identity = 98/204 (48.04%), Postives = 127/204 (62.25%), Query Frame = 1 Query: 16 RDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRDEVPPALHDLVLSS 627 RDA+AK+LYS LFDWLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ +V+F DN D L L E +P GLLSLL EEST GT L L + +Q N RF GG FGV+H+AGEV+YD++ F+EKNRD + L+ SS Sbjct: 505 RDALAKSLYSGLFDWLVEQINKSLKV-------GKQGTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYVQDG-----IDWAKVDFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSRFT---------GGRGKSFGVIHYAGEVVYDASGFLEKNRDPLHLDSIQLLASS 687
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A6J0JC03_RAPSA (myosin-1-like n=2 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0JC03_RAPSA) HSP 1 Score: 171 bits (432), Expect = 2.280e-45 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1 Query: 4 AAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRD 588 A ARDA+AK++YS LFDWLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ RV+F DN D L L E +P GLLSLL EEST GT L L + +Q N F +G E LF VVH+AGEV YD+T F+EKNRD Sbjct: 477 AIDARDALAKSVYSCLFDWLVEQINKSLAV-------GKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDG-----IDWTRVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCF---------RGDREKLFTVVHYAGEVTYDTTGFLEKNRD 650
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A3P5ZIY6_BRACM (Uncharacterized protein n=3 Tax=Brassica TaxID=3705 RepID=A0A3P5ZIY6_BRACM) HSP 1 Score: 171 bits (432), Expect = 2.300e-45 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1 Query: 4 AAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRD 588 A ARDA+AK++YS LFDWLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ RV+F DN D L L E +P GLLSLL EEST GT L L + +Q N F +G E LF VVH+AGEV YD+T F+EKNRD Sbjct: 523 AIDARDALAKSVYSCLFDWLVEQINKSLAV-------GKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDG-----IDWTRVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCF---------RGDREKLFTVVHYAGEVTYDTTGFLEKNRD 696
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A078GIZ4_BRANA (BnaA05g19230D protein n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A078GIZ4_BRANA) HSP 1 Score: 171 bits (432), Expect = 2.370e-45 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1 Query: 4 AAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRD 588 A ARDA+AK++YS LFDWLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ RV+F DN D L L E +P GLLSLL EEST GT L L + +Q N F +G E LF VVH+AGEV YD+T F+EKNRD Sbjct: 464 AIDARDALAKSVYSCLFDWLVEQINKSLAV-------GKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDG-----IDWTRVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCF---------RGDREKLFTVVHYAGEVTYDTTGFLEKNRD 637
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: M4F434_BRARP (Uncharacterized protein n=12 Tax=Brassica TaxID=3705 RepID=M4F434_BRARP) HSP 1 Score: 170 bits (431), Expect = 3.110e-45 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1 Query: 4 AAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRD 588 A ARDA+AK++YS LFDWLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ RV+F DN D L L E +P GLLSLL EEST GT L L + +Q N F +G E LF VVH+AGEV YD+T F+EKNRD Sbjct: 470 AIDARDALAKSVYSCLFDWLVEQINKSLAV-------GKRRTGRSISILDIYGFESFEKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDG-----IDWTRVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCF---------RGDREKLFTVVHYAGEVTYDTTGFLEKNRD 643
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A3N6Q3J8_BRACR (Uncharacterized protein n=3 Tax=Brassica TaxID=3705 RepID=A0A3N6Q3J8_BRACR) HSP 1 Score: 170 bits (431), Expect = 3.110e-45 Identity = 98/195 (50.26%), Postives = 123/195 (63.08%), Query Frame = 1 Query: 4 AAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRD 588 A ARDA+AK++YS LFDWLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ RV+F DN D L L E +P GLLSLL EEST GT L L + +Q N F +G E LF VVH+AGEV YD+T F+EKNRD Sbjct: 483 AIDARDALAKSVYSCLFDWLVEQINESLAV-------GKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDG-----IDWTRVDFEDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTLANKLKQHLHSNSCF---------RGDREKLFTVVHYAGEVTYDTTGFLEKNRD 656
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Match: A0A7J9CT76_GOSGO (Myosin motor domain-containing protein n=2 Tax=Gossypium gossypioides TaxID=34282 RepID=A0A7J9CT76_GOSGO) HSP 1 Score: 160 bits (404), Expect = 8.010e-45 Identity = 91/195 (46.67%), Postives = 119/195 (61.03%), Query Frame = 1 Query: 4 AAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLDIFGFEAFGTNSLEQLLINYANERLQQQFNAFVFKLEEKEFSTEGLSRVYVEQCRVEFADNDDVLRLLEGRPSGLLSLLKEESTLKTGTGLRLGKRYRQTFAKNDRFAVPRARGGNQGGTEALFGVVHFAGEVIYDSTEFVEKNRD 588 A + RDA+AK++Y+ LF+WLVE+IN +L G + + R I +LDI+GFE+F NS EQ INYANERLQQ FN +FKLE++E+ +G ++ +V+F DN D L L E +P GLLSLL EEST GT + +Q N F +G E F V HFAGEV YD+T F+EKNRD Sbjct: 69 AIETRDALAKSIYAGLFEWLVEQINKSLAV-------GKRLTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDG-----IDWAKVDFDDNQDCLHLFEKKPLGLLSLLNEESTFPNGTDYTFANKLKQHLNSNPCF---------KGEREKAFTVSHFAGEVTYDTTGFLEKNRD 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11799.1145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11799.1145.1 >prot_H-paniculata_contig11799.1145.1 ID=prot_H-paniculata_contig11799.1145.1|Name=mRNA_H-paniculata_contig11799.1145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp VAAQARDAVAKALYSALFDWLVEKINLTLTAAMNSKTTGDKASNRFIGLLback to top mRNA from alignment at H-paniculata_contig11799:560..3625+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11799.1145.1 ID=mRNA_H-paniculata_contig11799.1145.1|Name=mRNA_H-paniculata_contig11799.1145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3066bp|location=Sequence derived from alignment at H-paniculata_contig11799:560..3625+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11799:560..3625+ >mRNA_H-paniculata_contig11799.1145.1 ID=mRNA_H-paniculata_contig11799.1145.1|Name=mRNA_H-paniculata_contig11799.1145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig11799:560..3625+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |