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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 813 |
| Cds size | 435 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4566.11447.1 >prot_H-paniculata_contig4566.11447.1 ID=prot_H-paniculata_contig4566.11447.1|Name=mRNA_H-paniculata_contig4566.11447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp
MSAVTSAAGGAGTGGASLDNVGLTAPAPEVAKFPGATAIQAAATVTPGTI
TAGPQPPPNTTAGLTLGATAVTSSTSAVTYASFAPSHGPTGYMGVGGVMG
RLTPAAVHAAHAADAAAMQQQQQHEAMPQAGTASVTPLSAAMMPT back to topmRNA from alignment at H-paniculata_contig4566:5728..14053- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4566.11447.1 ID=mRNA_H-paniculata_contig4566.11447.1|Name=mRNA_H-paniculata_contig4566.11447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8326bp|location=Sequence derived from alignment at H-paniculata_contig4566:5728..14053- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGCACTTCGTTGCTTTTGAGTCGAGTTAGAGAGAGAGGCCAACCCATAA
GGCCACACCCCGGCCAGACCTCGTATCCACGGCGAAACAATAGCAACAAG
GACATCGCATAGGCGAGAAAGGGAAAGAAAGAGGGAGAGAGGGAGAGCGA
TAGAGCGAGGGAGGGAAAGAGAGGGGAGACAGAGGTACGGAGATAGGGAG
GCATACTCTCTATAACGCTTCTTTTTTGGAGCGATCTGACTGTGTATGCT
GCAACCCAACCTTCGAAAGCCGAGAGTGCCAGCAGTTGGCGAGCAAATTA
GAAACAGCGAGCGGGGGGGTCCTGGAAGTTGGAAAGAGGCAAGCAAGCAA
GGTTACACCTACGTACCGCGAGAGGAGAATGTCTGCAGTCACATCAGCTG
CAGGAGGCGCAGGCACGGGTGGAGCCTCCCTAGATAATGTGAGCACACTA
CTACTTCTGGTTGGTTTTGGTCCTCTTTTGACGCTATTGTCTCTCTTGCC
CAACTAAAATGTACTACTGTGTCGGACATTCAGTTCAGCCCACACCCTGT
ACTGTCTGTACTGTTATCGTCAACCTTTATTGAAGGTTTGTACTGGCATA
CAGAGAGAGAGTGAACATAACTGTACGCAAAAGAGAGAACAGAAGGAGGG
CAGTGTATATACACGACATCCAGCAGTGCAGCTAGCACTGATCGCACCGC
ACTTGTACATCACCTTAGCTCTTGCCTAAGAGAAACCTTGAACAGCATGC
AGCCGACGGATGACCACACCGGCTACTGCTCTTGTCAGTGTAGACCAATC
AATGCTTGTCTGAACACGCACAATTGGTGTCTCCGTGCCATCAAGTCAAC
TCGAGCTTTTCTCGTGTGTCCTCTTCGAGTAATCATCCCGTACTGTACTT
TCTGTCTGCACACACTTGGGTACAAGTTCTCGTACAGACAACTGTAGACA
GTGAGCCAGTGAGACAAGCGCTAGCTTCGGTGTAGCAATTTCGAGCGTAA
AGCAGCACCGAGGTATAATAGTCCTGCATGGATCTTGCTGAGGATTTTTG
CTGAGGATTCTTGCTGAGGATTGGTTAGCCCCTCACTATTACTACCGCTG
CTGCTGCTGCACATGACCGATTTGGTTGTGTCTTGGAGTATCTCCTCCTC
GCTCTTCACCTCTCGGATGTATAGAAATAATATGGCTGCTGACCCAAAGC
TTGAATCGGAATTCGGCGGGTACACTGACTATTAACACTGTGCATACCGC
GCAGAACAACCCCCCCGCATCGATGAGTTTTCCAAAGTCGATCGAGAATG
CAAGGGCTTCCTGTACAATCTGTCTGCTGCTGTCGGAAAGGGCATCCCTA
TTTTATTATGATCGTGACAGGTGTATGTATGTCGACGAGATCTTTCGGAC
GATGATGCACCCTTAGGTCTCAAGCGCCACACTGTAGTTTTCAGGAAAAG
TCGAGTTTTAAAATTGTCATTACAGGGGGGTGGTATGTAACGTGATATTG
TCTGTTACTGTATCTGCGATACTGTACAAGACGGTCGACTTCCGAGATGC
TACCGGACTCCGACTTGCCACCACTAAGGGCTAGATGTAAAGGATTAGGG
CTGGAACTCAGTAGCTTTACCCTCTCCGTGCCTTTCCCGGGACAGCAAAA
ATAATTCAATGCAAATAATAATACAGACAGTACACATGTGTGGGTACCGT
ATATAAGGCACTGAAACAGGTTGGCGGATAGAAGTCCAGGTGGTATTACA
TCTTAATATCCACCCCCGATGACATCATTAAAAAATATATATGTTTTGCG
AAAACTTGCGGTCGGTCTATCTGCTCGTTGTCACCGAAAATTGTGTTGTG
TAGAAAAAATGGACGGGTGTTCTCGGTATTTAGACCAAACGATATTCGGT
ACTCGGTATTTCGGGAATAAGGCGATGGCCACTTGGACTTTGAAAAAAAA
CGACGAGATATTGTTCCCACGGAGTGTAGCTATATCGTGGTACTTTTATA
ATACTGCTTTCCTCAGTGGTACCCGTTTTATACGCGGTTAAAAAAAAAAA
AAAAAATCATCGTGTAGCGGAAACGTAGCTGACGTTCCTAGGGTTGTTGA
ACTCCGGCCCCGCAGCGATATTTCTAGCTGCTTCCAATCCTGGATGATGA
CCTGTTCATAGCCGGTAAAAAAAAATCCAAGTGCGTGCCCTGCGCTAAAT
CCCAGGACTTGGAACCAACATTTCGAGCCGACTTTGTTCCCTCGAGAGTT
CTTCTTTCCTGGGAGAATCCTGTTCTCATTGGCGTTCGTCGAGATAGACG
TGTCATTGGATAGGCTAACTCTTTCAACGGTACAGGTTATTACCCTGGGA
ATTACATACGAGTATTATTACGAATTAGTATACCCCCCTTTCAGATTTGG
CTGCCATGAACTGACTCCACGCAGGAGGAGTAAAGAAGGAGCACCCCCCT
TTTGCCAAGTCAATTTTAGTCGCGCGTACGCCCTGCCAACTATGCCAGGT
TCTGCTGGTTCGGTTTTAGGTGTAGCCTTCCGATGAGATGGGATTGGGCT
CGGGAAGCTGGGGCATTGAGGCAGCTGCCGTGACCTGTATACTGTGTTCC
GAAATTGGGTTCTTCGAGAGCTTTTGTAATTTATTTACTCCCTACAGGAA
GTATATACTCAACAGCGACCTTCATAGATCCCCCCTCTTTCGTAATTTCG
ATAAATACCTCCATACATTCGAAGTTTTGCTGCTTTCCGCAAGCGAAACG
TGCGCCATGTGCTGGAAACCTCACGTTTTGCACAGTCTTTCACGGTGTGC
ACCGGCTCGGCAGGAATGCAAAAATCACTTTGTTCTCGCTTGAAAGACTG
CCATCACTGGTGTATACGATACGGTGCGGTGCGATACGGTACGATACAGC
AGCAATATGTGACAACCGCAGTGTTATTGAGATTCACTGCGTTGTACCGT
ACTGTATTGCACCGTACTGTACAAGTATGTGGAGTGATTTTCCATCCCGA
TTTCACTGTGCCAACTCGCTGAAGATGTAAATTATTCGCCATGTCATCAT
CCACAGTAGTAGTGCAATCAGTGCAGTCAATGCTATTCTTGTTGCCATAA
GCACAGATAGGGGTAAAATGCTCCACACGTGTTCACTGTCATTTTTTCAT
GATTGCAGATGTGACTTTTTCGTGCCCACGCCTCTATTCGAACCCCAAGA
TCAGGCCGCAAAAAAACAGCGCTTCATGGGCCAGGCAAGTATGAGACAAG
GAAAATGACACATACTATTATGGGCGATGGCTCTCAATCGCGCACGCAAA
ATCATGCGCGTGTACTTTTGCTTGCTAGCGCCATACTACATGCACGACGT
GCAGCTCCAAGCATGATGGTACTCTCCGCGGTGCATTATTCTATTGTGGA
GGTGTTCCTGACACAATTTTTCTTGTGATTACTGTACTTATGGCTCTAAG
AGCGCCATTCAGCGGCCCTACCTAGTCCCTTTTTCCCAAGCTGCACATCA
CTTCTTTCTATTAACGTACAACTGGTAGTTTCATTTTTTCCCGCGGTTGA
ACCGACACTACACGCGATCTGAACTCGGGTCTGAGCGGGTGGACTACTTT
GTTTGAGAACAAACAGAGGCGATGGTGTCACATCCATGATGATATGATTC
GCAACATCTTTGTACCACACCCCCGCAATATATATACTCCAGACAACATA
TATATATATATATATATGTTGTCCTCGATTTTCTCGAAAATTACGGTAAT
CGCTAGTGATACCGAAAACAATTTTGTCGTCGAAATGAAAAATATTGAAG
ATTTTTGTTGAGGTATATCTGTCATTACATGAACGTACGTGCATGCTTAG
GCTCGGGCCATCCCAATAAGTTCAGATAAATAACACGGAACAGCATCCAG
TTGAACTTGTGATGCTTGAGTTATTGCAAGCTTACTTGAAAAGGCACCTG
CTGCTTGTCCATTTTTTTCCATCCAAGAAGACGTCCTTTGTTTGAAAAGA
GCAACAGAGGCGATGATTTGCACAGGCGAGGAGATGATCTCTCTCACTCG
CTCGCTTGCCCTGTTTGAGAAGAGCTTCAGATGAGGATGATGGTGGTGAT
GATATAAGCAATGGCACAAGCCAGTTTGAGTTGGGTTCGCCACTGACCTG
TCTGCAGTTGGCGATGCGCTCCGAGGCCACTGGCCCACTGGCCTACTACT
CGTATATTTGTACATATCTATTTATTAACTGGAGCGATAGGCCCTGTAAC
GTGCGGTAACCTTATTATTGATTGTTTACACGGCAATGGAGAAGATGATG
GTGGTGGTGGTGACGCTCCTCTCGGAACAGCTTCGACTCTTCAGCCAGTG
TTTTTTCGAGGAGTCATGCGCCACTGGCGTGTAGCTGTAGTCTGCCAACT
ATGCAATATTGCTTCTAATGCTGTAGGCAAGTAAATATCAGCATCATCTT
AAACCTGCTCGTTTTTTTCTGCACCGTTGCAGCTGTGCGCCTTCGGCTGT
TTCGGCCTGTTACCCTATTGTCTATATATACTCCAGGCCATAATATATCA
TGTTAGATAACATCCCCTGTGATGGATATTTTTCCATTTTTTTTCGAAAA
AAGCAATAGCCTGCATTGGCGACAGAGCACACGTCTATACCAATAATATA
TACATATATACATAACATCGATGAAGTCTTTTCATCGACACGGTGATGTA
AATCACGGAAAGCTGCAGCGGTGTTCATTCTACGTAGAGTTTCTGTACTG
CTTTTAATATATAGCAGGGGACCAATATAGAGATTGAAGCACTTTCTGCT
GATAATTCTACCCGAAGTGCTTGCCTATGCCAGTTCTAGCTGGGGTCGGC
CATTCCACATGATCAGCAGAGCTCACGTACGTCATGAGCGATAGCGGCTA
TCTTAGGTAGGGCCTCAAAATGCCCTAACGATGAAGTGCACAGTGAGCAG
CTTCCGCAATCCTACACGTTACGTGTGCTTCTAGATTACGACACTGTACA
TTGGCGGTCAGAAGTGGGATATGATCAAGAAACCTCGAATCCCGTTACTT
GCGTACTTTCTCAATGAAATTCAACTTTCACGTTCAGAGTAGTAGAGAAG
CCACGGCTACGCCAACGAGGTAGCTAACTCAGATCCCCTCATGATCATGA
TCATGATCATGATCATCATCACCATCATCATCATCATCATCATCATCATC
ACCGCGTCAGCGCATTTAGGAATAGAAGTGCGGCATGTTTTAGTGCTGTT
GTTCTTTATTCAGCCAAATAGTGTTAATGGTGTTGTTTTGTTGTTCAGGC
GTTACACTTCGATATTATGAATCCAGTTGGTGTGAACTTGAGTCACACCT
CAGCGACATGAAATGTCCTGAGGTAGTTTGGTCATAGCATGTCCCACCCG
CGTGTTGTGCCTTGTACCTCTTTAGATGAATTATAATACCTAGCGAAAAG
CATTTCCATTTATATACACTGTATTCGCTATGCAGCATGGATTGATCGCA
ACCCTGGATCTTCCTTAAGTCAAATGAATGCCGTAATTTATGAAGTGTAG
CACCATGCAGGAAGGAGTATATCACCCCCCTTCGGCAACTGAGGAAAGAG
CAACTGACCATCAGAAATAGCTCCGGTCGATTGCACAACAACTGCGGCAT
ACGAACATGAGTACCCCTTCCCCCCAAATATGACTCCCCGCGATAATTTC
CCAAATGTTATTTCGGGGGAACCCCCCTGGAGGGGGGGGGGGGGTGTTAT
TGGCTGTATACTCTAGCACAGCAGTTGTCGAATGTCGAAACTTTATTTCG
GCGAGCTGGACGCACACCAGTTTATGCGTAGTACGGGCATGTCCATCCAC
TACCGTGGTTCAACAAGTCAATGTATTGTATTGATGGTGTCGAGTGAAAT
TTGATACACACAGCCAAAGCGCCCGGCATCGCCAATTTTATGCGAACTAT
CTCGGTACGCCCCCCTCCCGACCCTCCCATTGATCGATATAGTAGTACCA
AACGAATTGGAAAAAGCGAATTCTGGTGTCCGCAAAGAAACTGTACCGCC
TTTTTTGAATGAAGAAGACGTGTTTCGGCGAATATTATATTCCCATGCGT
TTTGTACACAAACGTCGTCATCTCACTGTAACTCCTTGGCTGAAATGGAT
AATGGATGAAATTCGAGTTTTTTGGAAACCTACAGCACGCTCATGATACC
GACAATTGTGCACCCGCCAGACAAATACGAATACTTCCTCCCCCGGACAA
ATACGAATGGAGCATTCGCAACTATCTCGAACTATATTTTTTTTATCTTG
GGTAGACCAGACACGTATTTATTCGTTTACAACTCTGTGAATGGTCACTC
TACAGATGGTCAGCAGGTGGTCGTATACCCGGCGAACAGTCACAGATGCA
GGTCCTGTTTTGTTTTCCGGATGGTACGGTCTGTACAGACTGATTAGTCT
ATCTGCCCGAGCTTTTCGATGCTCCATGGTATATCGAGTACACCGCATCG
TATTCGCGTCACATGGACATCTGCCCCAGCTCAGACAGGTACAGCATTCG
TTCCAGATTTCTTGTATTCATTCGTGTCTTGTACTCGTATTTGTCCGGGG
CGTGGAATACTTGCAAATGGTTTTCACGAAGAAACTGAAAATATTCGCCT
GGGTTTCAGAATTTGCCGACACATAAAATGAAGTACCCATCCAGCTGTCC
ATTCGGTTTACGATATTATTAGCAGTCGTGGATGGTCCGGGGCACATGGA
ATACACGGGCTTGTTCTGATACTCAGGCGAATATTGTTTCAGTTTTTTGT
AAACACCATTTGCACGAAATCGTTGTTGCTTGTGCGGGGAGTGCGATTAT
GTCATTCGGAAAGGTCTCGTCGATATAAATGTGTCATGAGATAGACGGGC
GTGTCGAGGAAATCGAGTTCAATCGTTATGGCGCCCGACCGTGTAAAAAT
CCCTACATAATCTCTTGTAGGAAACAAAGAGGTCAAAATCCTTCGGAAGT
TTTTTGTGAGCCACGTCCACATGATTACGGGGATGGGAAGCTCAACAGAC
CGTACACACGACCCTGTCATGATGATTTCGGACACACAGACAGGAGTTGT
ATTGCCAATGGTTTTGAGTTCCACGACAGCAGCACATGATTGAAACGGGA
AGCACAAGTCGCATCATGAGGGAGTGATTCCACGGACCTACGCCCGAAAG
GGTAGGGTAGCTCGTGAACTGAGCATGACTGGAAGTCTATTATATTAGTC
AGAGGTCTTTTAGTGGGTGCAACCCTCACACTGCCTACTTGGTTCGGCCG
AACCGGGGTGGCGCCTACCCCGCAGAGGAATAAATAACTCTGTTCTGTCA
AAGGAAGCGTAGACATACTTTGGTAAAATATTTAAGTATGGAAGCATCGG
TAAAGGTTTTTGCCTCAGCCTTCTGGGGGTTAATAAACAAAATGAGGGAG
TGATGATTGTACAGGGTGTGTATGCCACAGAAAGCCGCACGCGGGCAGGA
CATGTAATCAAAAACACCACCATGGCTCTCACAACGCTGTCCCGACAACC
GCAGACAGTACAGACACTGCAGACAGTACAGGCACTGCAGACAGGAAAAT
GCAGAAATGTTTGTCGCACAGACTGTGCATGTGTCGTTAGTGACTTGTTG
ATGAAAGCATCAGCCGCAGCCAAGGTGGCAGGTCAGCAGGTCAGCATATT
GAGATAACCTATTCATATTTTCCGTCGAACATAGTGAAAAAGTTGTTAAA
TCAGTGCTTCATGACTCGACATTCGAACTCGTTCGACAGTGGCTATATGG
ACATCACGCCTAACCCCTGCACCAATATGCAACCGCACACACACACATAC
ACCACGCGACCGTTATCCTCCTTTCATCTCCCACAAACACAATGCACATT
CCGTTACGTAATATTATTTCCGTCGCGTCTACTGACCAGGTCGGCCTTAC
GGCCCCCGCGCCGGAGGTAGCGAAGTTCCCCGGGGCGACCGCTATCCAGG
CTGCCGCTACTGTCACACCCGGCACCATTACCGCTGGCCCACCCGCGATG
CCGCAACCCCCTCCGAACACGACGGCAGGTTTAACGCTGGGAGCGACCGC
CGTGACGTCCTCGACGTCGGCGGTCACATACGCGTCTTTCGCGCCGTCAC
ACGGCCCGACAGGGTACATGGGTGTCGGCGGCGTAATGGGCAGGCTTACG
CCTGCTGCCGTGCACGCGGCGCACGCCGCCGACGCCGCTGCCATGCAGCA
GCAACAACAGCACGAAGCGATGCCACAAGCGGGAACGGCATCGGTTACAC
CGCTATCCGCGGCGATGATGCCGACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4566:5728..14053- >mRNA_H-paniculata_contig4566.11447.1 ID=mRNA_H-paniculata_contig4566.11447.1|Name=mRNA_H-paniculata_contig4566.11447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at H-paniculata_contig4566:5728..14053- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTGCAGTCACATCAGCTGCAGGAGGCGCAGGCACGGGTGGAGCCTC
CCTAGATAATATGTCTGCAGTCACATCAGCTGCAGGAGGCGCAGGCACGG
GTGGAGCCTCCCTAGATAATGTCGGCCTTACGGCCCCCGCGCCGGAGGTA
GCGAAGTTCCCCGGGGCGACCGCTATCCAGGCTGCCGCTACTGTCACACC
CGGCACCATTACCGCTGGCCCGTCGGCCTTACGGCCCCCGCGCCGGAGGT
AGCGAAGTTCCCCGGGGCGACCGCTATCCAGGCTGCCGCTACTGTCACAC
CCGGCACCATTACCGCTGGCCCGCAACCCCCTCCGAACACGACGGCAGGT
TTAACGCTGGGAGCGACCGCCGTGACGTCCTCGACGTCGGCGGTCACATA
CGCGTCTTTCGCGCCGTCACACGGCCCGACAGGGTACATGGGTGTCGGCG
GCGTAATGGGCAGGCTTACGCCTGCTGCCGTGCACGCGGCGCACGCCGCC
GACGCCGCTGCCATGCAGCAGCAACAACAGCACGAAGCGATGCCACAAGC
GGGAACGGCATCGGTTACACCGCTATCCGCGGCGATGATGCCGACGGCAA
CCCCCTCCGAACACGACGGCAGGTTTAACGCTGGGAGCGACCGCCGTGAC
GTCCTCGACGTCGGCGGTCACATACGCGTCTTTCGCGCCGTCACACGGCC
CGACAGGGTACATGGGTGTCGGCGGCGTAATGGGCAGGCTTACGCCTGCT
GCCGTGCACGCGGCGCACGCCGCCGACGCCGCTGCCATGCAGCAGCAACA
ACAGCACGAAGCGATGCCACAAGCGGGAACGGCATCGGTTACACCGCTAT
CCGCGGCGATGATGCCGACG back to top
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