prot_H-paniculata_contig45553.11428.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45553.11428.1
Unique Nameprot_H-paniculata_contig45553.11428.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length231
Homology
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.040e-47
Identity = 98/232 (42.24%), Postives = 149/232 (64.22%), Query Frame = 0
Query:    7 ALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFS--GDIPFVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAG-SGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAI 229
            +L++N T    D   L  GRKAI  KW+FK K K DGS+ +YKARLVA+G+SQ  G D+ ET  PVA+ +++  +  LAA+H+ EL+ MD++ A+LN+ ++E++++++P+  +     G    V +L+KSLYGLKQ+ R WN T+D F+      +S  D C+Y  R D  E  +LV++YVDDL++A  S E +   K  +S+ F+M DL  LS  LGIE+    P+G++ I
Sbjct:   70 SLLDNKTW---DVVELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQD--EDIILVSLYVDDLILASNSDEMMQTTKIALSKRFKMTDLGPLSYCLGIEI-VRSPSGSVFI 295          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 163 bits (413), Expect = 6.810e-46
Identity = 94/231 (40.69%), Postives = 145/231 (62.77%), Query Frame = 0
Query:    7 ALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIP-FVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKI-DEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAI 229
            +L++N T    D   L  GRKAI  +W+F+ K  + G + R+KARLVA+GFSQ  G D+ ET APVA+ +++  V  LAA++  +L  MD+  A+LN  ++E++++  P  +     D P  V +L++SLYGLKQS R WN T+DDF+      +  +D C+Y  RD  G+  + VA+YVDDLV+A S +++ +  KH +S+ F M DL  L   LG+E++ DR +G + +
Sbjct:   10 SLLKNDTW---DVVPLPKGRKAIGCRWVFRVKDNQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTV 233          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A165UZ38_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165UZ38_9AGAM)

HSP 1 Score: 163 bits (412), Expect = 2.280e-45
Identity = 96/233 (41.20%), Postives = 145/233 (62.23%), Query Frame = 0
Query:    7 ALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLDD-------FLRSTTDSCLY-FSRDDRGEADLLVAVYVDDLVIAG-SGEKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS 230
            +LVENGT E  +      GRKAI ++W+FK K   DGS+ RYK RLVA+GFSQ  G D+ ET AP  + ++L  +  LAA  D ELE +DI  AYLN  +EE+++++ P  F     +  +V RL+K LYGLKQ+GR+W+  L++       F R T +  ++ + +DD     +++ V+VDD+ IA  S   I + K ++ QHF+++DL   S +LG+E++ DR + T+ IS
Sbjct:   67 SLVENGTFELVE---CPPGRKAIGSRWVFKVKRNADGSIERYKGRLVAKGFSQRPGFDYNETFAPTPKWASLRAILALAALEDLELESVDISTAYLNGTLEEDVYMRQPKGFEQKGPE--WVWRLQKLLYGLKQAGRHWHEKLNEVLTEKLGFSRLTCEHSVWVYGKDD---VCIIIPVFVDDMTIASKSSAAIQKVKDDLRQHFKLRDLGPTSWLLGVEIKRDRSSRTLTIS 291          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT)

HSP 1 Score: 166 bits (419), Expect = 4.310e-45
Identity = 98/239 (41.00%), Postives = 149/239 (62.34%), Query Frame = 0
Query:    1 MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGS-VARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGD-IPFVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS 230
            MKGE  AL EN T E      L  G+  +  +W++   +KED + +   KAR VA+G+SQV G D+ ET +P A ++++  + +LAA++D  +  MD+  A+L+AP++ E+F++ P+ F   S + +  V RL+KSLYGLKQSGRNWN  LD++L      R+  D C+Y  +   GE  ++V ++VDDL+IA S  +KI +FK N+   FRMKDL  +S  LGI  +  + NG I ++
Sbjct:  164 MKGEMEALKENDTFELTT---LPEGKNLVGGRWVYT--IKEDANGLETLKARYVAKGYSQVHGIDYEETFSPTANITSITILMQLAAQYDLTVHQMDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVYQKQ--TGEDIIIVVIWVDDLIIASSNTDKIRQFKENMKSKFRMKDLGEISYFLGISFK--QGNGVIKMN 393          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A2N9J2F8_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J2F8_FAGSY)

HSP 1 Score: 169 bits (429), Expect = 1.090e-44
Identity = 102/225 (45.33%), Postives = 143/225 (63.56%), Query Frame = 0
Query:    1 MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNW----NNTLDD--FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEV 218
            MK E  AL++ GT +  D   L AG+ AI  KW++K K + DG+V RYKARLVA+GF+Q  G D+ ET APVAR+S++HT+  ++A   + L  MD+  A+LN  + EE++++LP  FS   G  P V RLR++LYGLKQ+ R W    ++T+    F  S+ DS L+F R D G    L+ +YVDD++I G   + I + K  + QHF MKDL  LS  LG+EV
Sbjct:  734 MKEELDALLKTGTWDLVD---LPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVHTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSPKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRRSDHGIT--LLLLYVDDMIITGDDVQGIQDLKRFLGQHFEMKDLGPLSYFLGLEV 953          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 169 bits (427), Expect = 2.060e-44
Identity = 101/237 (42.62%), Postives = 139/237 (58.65%), Query Frame = 0
Query:    1 MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLD------DFLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS 230
            M  E   + E GT   ED   L AGR  I  KW+F +K  EDG+++RYKARLVAQG+SQ+ G D+ ET APV R+ ++     +AA  D E+  MD+  AYLN  +EEE++++ P  +   SG    V RLRK+LYGLKQSGR WN   D       F +   D C+Y  R   G    ++ V+VDDL+I     E + E K  +   F +KDL    +++GIE++ DR NGTI++S
Sbjct:  898 MDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVY-KRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLS 1126          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: H3H9Y1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Y1_PHYRM)

HSP 1 Score: 165 bits (418), Expect = 2.610e-44
Identity = 95/231 (41.13%), Postives = 145/231 (62.77%), Query Frame = 0
Query:    7 ALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIP-FVRRLRKSLYGLKQSGRNWNNTLDDFL------RSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKI-DEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAI 229
            +L++N T    D   L  GRKAI  +W+F+ K  + G + R+KARLVA+GFSQ  G D+ ET APVA+ +++  V  LAA++  +L  MD+  A+LN  ++E++++  P  +     D P  V +L++SLYGLKQS R WN T+DDF+      +  +D C+Y  RD  G+  + VA+YVDDLV+A S +++ D  KH +S+ F M DL  L   LG+E++ DR +G + +
Sbjct:  308 SLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLDSTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTV 531          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A2N9EYY7_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EYY7_FAGSY)

HSP 1 Score: 168 bits (425), Expect = 3.450e-44
Identity = 101/225 (44.89%), Postives = 142/225 (63.11%), Query Frame = 0
Query:    1 MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNW----NNTLDD--FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEV 218
            MK E  AL++ GT +  D   L AG+ AI  KW++K K + DG+V RYKARLVA+GF+Q  G D+ ET APVAR+S++ T+  ++A   + L  MD+  A+LN  + EE++++LP  FSP     P V RLR++LYGLKQ+ R W    ++T+    F  S+ DS L+F R D G    L+ +YVDD++I G   + I + K  + QHF MKDL  LS  LG+EV
Sbjct:  545 MKEELDALLKTGTWDLVD---LPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSPPXXXXPKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRRSDHGIT--LLLLYVDDMIITGDDVQGIQDLKRFLGQHFEMKDLGPLSYFLGLEV 764          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 163 bits (413), Expect = 3.610e-44
Identity = 98/226 (43.36%), Postives = 135/226 (59.73%), Query Frame = 0
Query:   12 GTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLD------DFLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEVRCDRPNGTIAIS 230
            GT   ED   L AGR  I  KW+F +K  EDG+++RYKARLVAQG+SQ+ G D+ ET APV R+ ++H    +AA  D E+  MD+  AYLN  +EEE++++ P  +   SG    V RLRK+LYGLKQSG  WN   D       F +   D C+Y  R   G    ++ V+VDDL+I     E + E K  +   F +KDL    +++GIE++ DR NGTI++S
Sbjct:    2 GTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGR---VCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVY-KRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLS 219          
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Match: A0A2N9H804_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H804_FAGSY)

HSP 1 Score: 168 bits (425), Expect = 3.650e-44
Identity = 101/225 (44.89%), Postives = 142/225 (63.11%), Query Frame = 0
Query:    1 MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAAYLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNW----NNTLDD--FLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSG-EKIDEFKHNISQHFRMKDLDFLSRVLGIEV 218
            MK E  AL++ GT +  D   L AG+ AI  KW++K K + DG+V RYKARLVA+GF+Q  G D+ ET APVAR+S++ T+  ++A   + L  MD+  A+LN  + EE++++LP  FSP     P V RLR++LYGLKQ+ R W    ++T+    F  S+ DS L+F R D G    L+ +YVDD++I G   + I + K  + QHF MKDL  LS  LG+EV
Sbjct:  593 MKEELDALLKTGTWDLVD---LPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSPPXXXXPKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRRSDHGIT--LLLLYVDDMIITGDDVQGIQDLKRFLGQHFEMKDLGPLSYFLGLEV 812          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45553.11428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0WHK2_9STRA2.040e-4742.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H934_PHYRM6.810e-4640.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A165UZ38_9AGAM2.280e-4541.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9HG25_PARCT4.310e-4541.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9J2F8_FAGSY1.090e-4445.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A284QR88_ARMOS2.060e-4442.62Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
H3H9Y1_PHYRM2.610e-4441.13CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A2N9EYY7_FAGSY3.450e-4444.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A284R853_ARMOS3.610e-4443.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9H804_FAGSY3.650e-4444.89Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 24..221
e-value: 7.8E-53
score: 179.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..183
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 25..191
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45553contigH-paniculata_contig45553:760..1470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45553.11428.1mRNA_H-paniculata_contig45553.11428.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45553 232..1557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45553.11428.1 ID=prot_H-paniculata_contig45553.11428.1|Name=mRNA_H-paniculata_contig45553.11428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp
MKGEWGALVENGTRESEDTGRLSAGRKAIRTKWIFKRKLKEDGSVARYKA
RLVAQGFSQVEGEDFFETSAPVARMSTLHTVFRLAAEHDFELEGMDIDAA
YLNAPVEEELFVKLPLDFSPFSGDIPFVRRLRKSLYGLKQSGRNWNNTLD
DFLRSTTDSCLYFSRDDRGEADLLVAVYVDDLVIAGSGEKIDEFKHNISQ
HFRMKDLDFLSRVLGIEVRCDRPNGTIAIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like