prot_H-paniculata_contig45529.11422.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45529.11422.1
Unique Nameprot_H-paniculata_contig45529.11422.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.730e-20
Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            GL++P RVPQGV+NAT+Y+Q  M ++L  L    C+V+VDD+V W E E +LL  LDL+L R    GLF AAHK  FYTT+V
Sbjct:  777 GLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSV 855          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 6.960e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            GL+TP RVPQG++NAT+YFQ  +  +L+GL    C V+VDDVV W  D+ +LL  LDL+L+RL   GL+ AAHK  F+ T++
Sbjct:  875 GLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSI 953          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A2P4YJ51_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJ51_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.510e-14
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            G+FTPTRVPQG  +A  +FQ  ++ VL  LVG+C +V++DD++++AE + ELL  +D VL++L E G      K   + T +
Sbjct:  310 GVFTPTRVPQGSTDADLHFQSTVQMVLRELVGKCVIVWIDDLLVFAETQSELLDAIDAVLQKLDEYGFILNPKKCSLFRTEI 391          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A2P4YLW7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLW7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 6.100e-14
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            G+FTPTRVPQG  +A  +FQ M++ VL  LVG+C +V++DD++++AE + ELL  +D VL++  E G      K   + T +
Sbjct:  113 GVFTPTRVPQGSTDAALHFQSMVQMVLGELVGKCVIVWIDDLLVFAETQSELLDVIDAVLQKFDEYGFILNPKKCSLFQTEI 194          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A6A3X8Z5_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3X8Z5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.910e-13
Identity = 34/82 (41.46%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            G+FTPTRVPQG  +A  +FQ  +  VL  LV +C +V++DD++++A+ E EL+  ++ VL +L E GL     K+  + T V
Sbjct:   32 GVFTPTRVPQGSTDAALHFQFTVEMVLGELVNKCVIVWIDDLLVFADTEEELVDAIEAVLTKLGEYGLKLNPKKSALFLTEV 113          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A2P4XIX6_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIX6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.590e-12
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTT 80
            G+FTPTRVPQG  +A  +FQ  +  VL  LVG+C +V++DD++++AE   +L+  +D +L++L E G      K   + T
Sbjct:  651 GVFTPTRVPQGSTDAALHFQSTVEMVLGDLVGKCVIVWIDDLLVFAESADQLVESIDAILQKLDEHGFILNPKKCSLFLT 730          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A2P4X0M2_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X0M2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.510e-12
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    2 LFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            +FTPTRVPQG  +A  +FQ  +  VL  LVG+C +V++DD++++AE   +L+  +D +L++L E G      K+  + T V
Sbjct:  587 VFTPTRVPQGCTDAALHFQSTVEMVLGDLVGKCAIVWIDDLLVFAETADQLVESIDAILQKLDEHGFILNPKKSSLFLTEV 667          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A2P4Y427_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y427_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.210e-11
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            G+FTPTRVPQG  +A  +FQ  +  VL  LV +C +V++DD++++A  + EL+  +D+VL +L E GL     K+  +   V
Sbjct:  479 GIFTPTRVPQGSTDAALHFQSTVEMVLGDLVNKCVIVWIDDLLVFANTQEELVGAIDVVLTKLDEHGLILNPKKSTVFLKEV 560          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.230e-11
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGL 68
            GL TP RVPQG++NAT+YFQ  +  +LEGL    CLV+VD VV    +E +LL  LD+++ERL   GL
Sbjct:  656 GLHTPKRVPQGILNATSYFQATLSRILEGLN---CLVWVDGVVNRGMEEDDLLNTLDMIVERLDGAGL 720          
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Match: A0A5S6QPV1_TRIMR (Uncharacterized protein n=3 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QPV1_TRIMR)

HSP 1 Score: 67.8 bits (164), Expect = 2.330e-11
Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    1 GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTV 82
            GL+    +P G+ NA A FQ +M  VLEGL  R CLVY+DD++++A    E ++RLD VL RL + GL     K    TT V
Sbjct:  620 GLYQFRVMPFGLCNAPATFQRLMEKVLEGLQWRTCLVYLDDIIVFARTPTEQMQRLDEVLNRLQKAGLKLKPSKCKLMTTEV 701          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45529.11422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE3.730e-2054.88Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE6.960e-2052.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4YJ51_9STRA4.510e-1442.68Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4YLW7_9STRA6.100e-1442.68Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6A3X8Z5_9STRA8.910e-1341.46Reverse transcriptase domain-containing protein n=... [more]
A0A2P4XIX6_9STRA2.590e-1240.00Reverse transcriptase domain-containing protein n=... [more]
A0A2P4X0M2_9STRA3.510e-1239.51Reverse transcriptase domain-containing protein n=... [more]
A0A2P4Y427_9STRA1.210e-1140.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCK9_9PHAE1.230e-1152.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5S6QPV1_TRIMR2.330e-1145.12Uncharacterized protein n=3 Tax=Trichuris muris Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 3..79
e-value: 1.6E-10
score: 40.9
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..83
score: 10.126
NoneNo IPR availableGENE3D3.30.70.270coord: 8..82
e-value: 8.2E-18
score: 66.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45529contigH-paniculata_contig45529:27..275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45529.11422.1mRNA_H-paniculata_contig45529.11422.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45529 27..277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45529.11422.1 ID=prot_H-paniculata_contig45529.11422.1|Name=mRNA_H-paniculata_contig45529.11422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
GLFTPTRVPQGVVNATAYFQEMMRTVLEGLVGRCCLVYVDDVVLWAEDEG
ELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom