prot_H-paniculata_contig45454.11413.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45454.11413.1
Unique Nameprot_H-paniculata_contig45454.11413.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
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BLAST of mRNA_H-paniculata_contig45454.11413.1 vs. uniprot
Match: A0A6H5KJL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL2_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.060e-21
Identity = 40/55 (72.73%), Postives = 49/55 (89.09%), Query Frame = 0 
Query:    1 RYTFPNEEISHVILGDRDLARAEIVSALEAHPCTPPIVTVSWLLETCRAGRLLPT 55
            RYT PNEE++HV+LGDR LA+ E++SALE+HPCTPP+V   WLLETCRAGR+LPT
Sbjct:  349 RYTSPNEELTHVVLGDRTLAKPELISALESHPCTPPVVHALWLLETCRAGRMLPT 403
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BLAST of mRNA_H-paniculata_contig45454.11413.1 vs. uniprot
Match: D7G795_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G795_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 9.410e-21
Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 0 
Query:    1 RYTFPNEEISHVILGDRDLARAEIVSALEAHPCTPPIVTVSWLLETCRAGRLLPT 55
            RY  PNEE++HV+LGDR LA+ E++SALE+HPCTPP+V   WLLETCRAGR+LPT
Sbjct:  230 RYISPNEELTHVVLGDRALAKPELISALESHPCTPPVVHALWLLETCRAGRMLPT 284
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45454.11413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJL2_9PHAE1.060e-2172.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G795_ECTSI9.410e-2170.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 2..57
e-value: 4.0E-6
score: 28.7
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 4..55
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1..57
score: 10.279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45454contigH-paniculata_contig45454:1053..1226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45454.11413.1mRNA_H-paniculata_contig45454.11413.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45454 1053..1226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45454.11413.1 ID=prot_H-paniculata_contig45454.11413.1|Name=mRNA_H-paniculata_contig45454.11413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
RYTFPNEEISHVILGDRDLARAEIVSALEAHPCTPPIVTVSWLLETCRAG
RLLPTAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom