mRNA_H-paniculata_contig4532.11392.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: D7FTP3_ECTSI (Putative GPI-anchor transamidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP3_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 4.610e-167 Identity = 239/297 (80.47%), Postives = 259/297 (87.21%), Query Frame = 1
Query: 241 SRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRG-SPGVQQTASLRNSVTLGALFGSLRPKTLASTPFVELKGWTGSPLDEASARLCCYIAT 1128
SRHNNNWAVLVCTSRFWFNYRHVANTLSVYHT+RRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDH+LNLYEGDVEVDYRG+EVSVESFLRLLTGRTLPGTPPSKTLATDEHSN+LIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQA TLF+EI S +V+C+GSS+RGENSYARGSD +IGL+LMDRFTSA+LDFFQAA K E + +RG S G +LRN VTLGAL S+RPK+L S+P VELKGWTG PL+ +AT
Sbjct: 61 SRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGED----VTANRVRGFSSGNSAPLNLRNDVTLGALMHSMRPKSLLSSPTVELKGWTGPPLNMDGVGFAPAVAT 353
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: A0A7S2V326_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V326_9STRA) HSP 1 Score: 338 bits (866), Expect = 2.670e-110 Identity = 170/294 (57.82%), Postives = 209/294 (71.09%), Query Frame = 1
Query: 184 GKNGRIRFAAALSEDQKTMSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTPFVEL 1065
G R+ A + D RHNNNW VLV TSRFWFNYRH+ANTLS+YHT++RLGIPDS I+LMLADDMPCNARNP+PG +YN+KD KLNLY VEVDYRG +V+VE+FLRLLTGRT PG P SK L TDEHSNILI+M+GHGGD FLKF D EEVSSHD+ A+ EM +K RYH +L +VDTCQA TL +I SP V+ +GSS GENSYA SD S+G+A++DRFT A LDFF+ F + GV ++++ + S +L +L P L STP +++
Sbjct: 10 GSQHRMGACAQNNGDGTEKLRHNNNWVVLVSTSRFWFNYRHIANTLSIYHTVKRLGIPDSQIILMLADDMPCNARNPYPGEIYNNKDRKLNLYGDVVEVDYRGTDVTVENFLRLLTGRTKPGLPFSKLLNTDEHSNILIFMSGHGGDGFLKFQDSEEVSSHDIADAIEEMNIKGRYHEILLIVDTCQAGTLGQQIYSPNVVSIGSSKLGENSYAHHSDHSLGVAVIDRFTEATLDFFERRF----------------NADGVPRSSNSK-STSLASLISFYDPVKLKSTPDIQV 286
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: A0A7J7D2B7_TRIWF (GPI-anchor transamidase family protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D2B7_TRIWF) HSP 1 Score: 303 bits (776), Expect = 1.330e-95 Identity = 149/279 (53.41%), Postives = 196/279 (70.25%), Query Frame = 1
Query: 220 SEDQKTMSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTPF 1056
S + TM H NNWAVLVCTSRFWFNYRH+ANTLS+Y T++RLGIPD I+LMLADDM CNARN +P V+N+++H+LNLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S+IL+YM GHGGD+FLKF D EE+ SHDL A+++M+ K+R+ +L MVDTCQA+TLF+++ SP VL +GSS++GENSY+ DP IG++++DRFT L FF+ ++ N+ +L +LF S P TL ST +
Sbjct: 34 SSPETTM--HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHATAVPRSKQLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRRFKELLIMVDTCQAATLFNQLHSPGVLAIGSSMKGENSYSHHLDPDIGVSVVDRFTYYTLAFFE--------------------------KLNMYNNASLSSLFSSYNPNTLMSTAY 284
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: M1BWQ7_SOLTU (Gpi-anchor transamidase n=11 Tax=Solanoideae TaxID=424551 RepID=M1BWQ7_SOLTU) HSP 1 Score: 300 bits (768), Expect = 1.770e-95 Identity = 145/279 (51.97%), Postives = 193/279 (69.18%), Query Frame = 1
Query: 220 SEDQKTMSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTPF 1056
S T + H NNWAVLVCTSRFWFNYRH+ANTLS+Y T++RLGIPD I+LMLADDM CN RN +P V+N+++H+LNLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S+IL+YM GHGGD+FLKF D EE+ SHDL A+++M+ K+R+ +L MVDTCQA+TLF ++ SP VL +GSS++GENSY+ D +G++++DRFT L FF+ ++ ++ +LG+LF S P TL ST +
Sbjct: 26 SSSSATTTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNTRNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRRFKELLIMVDTCQAATLFSQLQSPGVLTIGSSMKGENSYSHHLDADVGVSVIDRFTFYTLAFFE--------------------------RVNMYDNASLGSLFSSYNPNTLMSTAY 278
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: E3JXE4_PUCGT (Uncharacterized protein n=1 Tax=Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) TaxID=418459 RepID=E3JXE4_PUCGT) HSP 1 Score: 298 bits (764), Expect = 2.080e-95 Identity = 136/218 (62.39%), Postives = 173/218 (79.36%), Query Frame = 1
Query: 247 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQA 900
H+NNWAVLVCTSRFWFNYRH+ANTL +Y +++RLGIPDSNI+LMLADDM CN RN FPG VY++ D KL+LY +EVDYRG+EVSVE+F+RLLTGR GTP SK L TDE SNIL+YM GHGGD+FLKF D EE+S+ DL A + M KKRY+ +LFM+DTCQA+T+ ++ SP ++ GSS +GENSY+ +D IG+A++DR++ VL +A
Sbjct: 37 HSNNWAVLVCTSRFWFNYRHIANTLGMYRSVKRLGIPDSNIILMLADDMACNPRNMFPGTVYSNSDRKLDLYGDGIEVDYRGEEVSVENFIRLLTGRVAEGTPRSKRLMTDERSNILVYMTGHGGDEFLKFQDAEEISAFDLADAFQTMWAKKRYNELLFMIDTCQANTMTSKLYSPNIVATGSSAKGENSYSHHADSDIGVAVVDRYSHFVLSHLEA 254
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: S8DYY6_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DYY6_9LAMI) HSP 1 Score: 299 bits (765), Expect = 2.680e-95 Identity = 145/270 (53.70%), Postives = 190/270 (70.37%), Query Frame = 1
Query: 247 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTPF 1056
H NNWAVLVCTSRFWFNYRH+ANTLS+Y T++RLGIPD I+LMLADDM CNARN +P V+N+++H+LNLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S+IL+YM GHGGD+FLKF D EE+ SHDL A+++M+ KKR+ +L M DTCQA+TLF+++ SP VL +GSS +GENSY+ DP +G++++DRFT L FF+ ++ + +LG+LF S PK L ST +
Sbjct: 27 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILVYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKKRFKELLIMADTCQAATLFNQLQSPGVLTIGSSKKGENSYSHHLDPDVGVSVVDRFTFYTLAFFE--------------------------RLNIYDDASLGSLFKSYNPKLLMSTAY 270
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: D0MXU2_PHYIT (GPI-anchor transamidase, putative n=17 Tax=Phytophthora TaxID=4783 RepID=D0MXU2_PHYIT) HSP 1 Score: 300 bits (767), Expect = 3.460e-95 Identity = 152/270 (56.30%), Postives = 190/270 (70.37%), Query Frame = 1
Query: 244 RHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTP 1053
RH NNWAV+V TSRFW NYRHVAN LS+YH+++RLGIPDS I+LMLAD MPCNARN FPG V+NS+ K+NLY +VEVDYRG EVSV +F+ +LTGR PGTP SK L TDE+SNI +YM+GHGGD FLKF D EE+SS DL +++EM +KKRY+ + FMVDTCQA +L + + SP+V+ +GSS GENSYA SD +GL+++DRFT + LD+ Q ++ S+RN TL LF PK L STP
Sbjct: 26 RHTNNWAVIVDTSRFWSNYRHVANALSLYHSVKRLGIPDSQIILMLADQMPCNARNCFPGQVFNSRTQKINLYGKNVEVDYRGSEVSVANFITVLTGRHEPGTPASKKLDTDENSNIFLYMSGHGGDGFLKFQDFEEMSSQDLADSIQEMHVKKRYNEIFFMVDTCQAGSLSNALESPKVVTIGSSQTGENSYAHHSDFELGLSVIDRFTFSTLDYLQR----------------------MKVGDSIRNG-TLRDLFNFYDPKMLLSTP 272
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: K3WBE6_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBE6_GLOUD) HSP 1 Score: 301 bits (772), Expect = 4.270e-95 Identity = 155/281 (55.16%), Postives = 192/281 (68.33%), Query Frame = 1
Query: 211 AALSEDQKTMSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTP 1053
AA S RH+NNWAV+V TSRFW NYRH+AN LS+YH+++RLGIPDS I+LMLAD MPCNARN FPG V+NS+ K+NLY +VEVDYRG EV+V +F+ +LTGR PGTP SK L TDE+SNI I+M GHGGD FLKF D EE+SS D+ A++EM +KKRYH + FMVDTCQA +L + I SP V+ +GSS GE+SYA SD +GLA++DRFT + LD+ Q K W +RNS +L LF P+ L STP
Sbjct: 31 AAASTASHAYRRHSNNWAVVVDTSRFWSNYRHIANALSLYHSVKRLGIPDSQIILMLADQMPCNARNCFPGEVFNSRTQKINLYGKNVEVDYRGAEVTVANFITVLTGRHKPGTPASKKLDTDENSNIFIFMTGHGGDGFLKFQDFEELSSQDIADAIQEMHVKKRYHEIFFMVDTCQAGSLSNAIVSPNVVTIGSSQTGESSYAHHSDEELGLAVIDRFTFSTLDYLQ-----RMKVGDW-----------------IRNS-SLRELFNFYDPRMLYSTP 288
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: A0A151ZE76_9MYCE (Phosphatidylinositol glycan n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZE76_9MYCE) HSP 1 Score: 302 bits (774), Expect = 4.630e-95 Identity = 136/224 (60.71%), Postives = 173/224 (77.23%), Query Frame = 1
Query: 226 DQKTMSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQ 897
+Q H NNWAVLVCTSRFWFNYRH+AN L Y T+++LGIPDS I+LMLADDM CN RN + G ++N+++HK+NLY D+EVDYRG EV+VE+F+R+LTGR P SK L TD+ SNILI++ GHGGD+FLKF D EE+SSHDL A ++M KKRYH +LFMVDTCQA+TL+ SP +L +GSS GENSY+ SDP +G+A++DRFT L+FF+
Sbjct: 46 EQLFRGEHTNNWAVLVCTSRFWFNYRHIANVLGFYRTVKKLGIPDSQIILMLADDMACNPRNSYAGSIFNNENHKMNLYGEDIEVDYRGYEVNVENFIRVLTGRHEPEVARSKRLLTDDKSNILIFLTGHGGDEFLKFQDNEEISSHDLADAFKQMHEKKRYHEILFMVDTCQANTLYKRFNSPNILAIGSSRYGENSYSHHSDPELGVAVIDRFTYYTLEFFE 269
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Match: H3G7F6_PHYRM (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3G7F6_PHYRM) HSP 1 Score: 296 bits (759), Expect = 9.010e-95 Identity = 150/269 (55.76%), Postives = 189/269 (70.26%), Query Frame = 1
Query: 247 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTIRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHKLNLYEGDVEVDYRGDEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNILIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQASTLFDEITSPEVLCVGSSIRGENSYARGSDPSIGLALMDRFTSAVLDFFQAAFAKEEKSRGWASIAAIRGSPGVQQTASLRNSVTLGALFGSLRPKTLASTP 1053
H NNWAV+V TSRFW NYRHVAN LS+YH+++RLGIPDS I+LMLAD MPCNARN FPG V+NS+ K+NLY +VEVDYRG EVSV +F+ +LTGR PGTP SK L TDE+SNI +YM+GHGGD FLKF D EE+SS DL +++EM +KKRY+ + FMVDTCQA +L + + SP+V+ +GSS GENSYA SD +GL+++DRFT + LD+ Q ++ S+RN TL LF P+ L STP
Sbjct: 1 HTNNWAVIVDTSRFWSNYRHVANALSLYHSVKRLGIPDSQIILMLADQMPCNARNCFPGQVFNSRTQKINLYGKNVEVDYRGSEVSVANFITVLTGRHEPGTPASKKLDTDENSNIFLYMSGHGGDGFLKFQDFEEMSSQDLADSIQEMHVKKRYNEIFFMVDTCQAGSLSNALESPKVVTIGSSQTGENSYAHHSDFELGLSVIDRFTFSTLDYLQR----------------------MKVGDSIRNG-TLRDLFSFYDPRMLLSTP 246 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4532.11392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4532.11392.1 >prot_H-paniculata_contig4532.11392.1 ID=prot_H-paniculata_contig4532.11392.1|Name=mRNA_H-paniculata_contig4532.11392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp MAKSRGRRNFLLSLVCAFILCGFVSPNGKNGRIRFAAALSEDQKTMSRHNback to top mRNA from alignment at H-paniculata_contig4532:8030..12407- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4532.11392.1 ID=mRNA_H-paniculata_contig4532.11392.1|Name=mRNA_H-paniculata_contig4532.11392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4378bp|location=Sequence derived from alignment at H-paniculata_contig4532:8030..12407- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4532:8030..12407- >mRNA_H-paniculata_contig4532.11392.1 ID=mRNA_H-paniculata_contig4532.11392.1|Name=mRNA_H-paniculata_contig4532.11392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at H-paniculata_contig4532:8030..12407- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |