mRNA_H-paniculata_contig4532.11391.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: D7FIE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE0_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.140e-73 Identity = 123/191 (64.40%), Postives = 147/191 (76.96%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLAAQVAVSAIFCSPLVRAHETAGIVQASNPTAI-FSVSEDLNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGG-GENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINALDYDTVSGSFEAVLVN 567
H QTD N L +CQGR+LNPPLN+ GR QA L V + AI CSPL RA ETAGIV+ S+P A F+VSEDLNEVDFG AEGLPQ+ +AA LAP+Y+AWS G+ +RAG GE+ +++R AA TLL +C EG QVLGVSHSSM+K TLA LLDVPL+ IR+LGQDNCA+NALD+DT SG FEAV +N
Sbjct: 99 HGQTDLNKLGVCQGRKLNPPLNENGRRQARTLLIDVELDAILCSPLRRARETAGIVRESHPLATSFAVSEDLNEVDFGGAEGLPQMASAAILAPSYLAWSHGRLDKRAGVLGESGVMLRRRGEAAAGTLLASCKEGRQVLGVSHSSMIKFTLAALLDVPLSTIRALGQDNCAVNALDFDTASGVFEAVAIN 289
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A6H5KHI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI7_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.640e-73 Identity = 122/191 (63.87%), Postives = 147/191 (76.96%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLAAQVAVSAIFCSPLVRAHETAGIVQASNPTAI-FSVSEDLNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGG-GENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINALDYDTVSGSFEAVLVN 567
H QTD N L +CQGR+LNPPLN+ GR QA L V + + CSPL RA ETAGIV+ S+P A F+VSEDLNEVDFG AEGLPQ+++AA LAP+Y+AWS G+ +RAG GE+ +++R AA TLL +C EG QVLGVSHSSM+K TLA LLDVPL+ IR+LGQDNCA+NALDYDT SG FEAV +N
Sbjct: 114 HGQTDLNKLGVCQGRKLNPPLNEKGRSQARTLLIGVELDGVLCSPLRRARETAGIVRESHPLATSFAVSEDLNEVDFGGAEGLPQMVSAAILAPSYLAWSHGRLDKRAGVLGESGVMLRRRGEAAAGTLLASCKEGRQVLGVSHSSMIKFTLAALLDVPLSTIRALGQDNCAVNALDYDTTSGVFEAVAIN 304
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A7V2AYQ0_RHOMR (Histidine phosphatase family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2AYQ0_RHOMR) HSP 1 Score: 110 bits (276), Expect = 7.040e-27 Identity = 78/191 (40.84%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLA---AQVAVSAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEGLPQLLA-AACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDV-PLNMIRSLGQDNCAINALDYDTVSGSFEAV 558
H +TD N I QGR ++ PLN GR QA LA AQVA+ A++ SPL RA TA ++ +P F V DL E+D+G EG P L A + Y W G R GGE++ E+QQRA+ A +L A G VL V+H L+I LA++L L + L N A+N + YD SF AV
Sbjct: 11 HGETDCNRQRIVQGRGVDAPLNATGRRQAEALARRFAQVALDALYSSPLQRAVATAEAIRCYHPQIPFYVMADLEEMDWGSLEGKPYALPYAEQIDYAYARWRAGDYGYRIPGGESILEVQQRALRALEQILEA-QAGRTVLVVTHGRWLRILLASILPAYGLARMEQLSHANTAVNQIVYD--GHSFRAV 198
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A1M6Q7W3_9BACT (Probable phosphoglycerate mutase n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6Q7W3_9BACT) HSP 1 Score: 102 bits (253), Expect = 1.820e-23 Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLA---AQVAVSAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEGLPQLLAAACLAP-------TYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLL-DVPLNMIRSLGQDNCAINALDYDTVSGSFEAVLVN 567
H +TD+N I QGR ++ PLN+ G+ QA LA A+VA+ AI+ SPL RA TA V+ +P F DL E+D+G EG P C P Y W G GGE++ ++Q+RA+ A T+L A EG VL V+H L+I LA++L + L + +L N A+N L + +G F A+ +N
Sbjct: 11 HGETDYNRHGIVQGRGVDAPLNEHGQRQAEALARRFAEVALDAIYTSPLQRARATAEAVRQYHPDLPFYQMADLEEMDWGDLEGKP------CAPPYDAQIRRIYERWQAGDYAYPVPGGESVLDVQRRALRALQTIL-ARHEGEAVLVVTHGRFLRILLASILPEYGLARMEALPHTNTAVNHLVCE--NGRFRALRLN 201
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A0S8I053_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium SM23_61 TaxID=1703399 RepID=A0A0S8I053_9DELT) HSP 1 Score: 100 bits (249), Expect = 5.540e-23 Identity = 66/177 (37.29%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLAAQV---AVSAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINAL 522
H +TD+N QGR + PLN+ GREQAG LA+ + +++AI+CSPLVRA ETA +++A +P+A + L E++ G EG+ A A AW GGE+L E+Q RAV A + +A +L SH+ ++ L L++PL+ R L Q A+N L
Sbjct: 5 HGETDWNLTGRFQGRS-DVPLNQKGREQAGALASALKGESLAAIYCSPLVRAKETALLIKAYHPSAPLHEEDGLIEMNLGEFEGIEGPRWAEKYADFRQAWRDNPASVTMPGGESLQEVQARAVAALERISKAHPPDCTLLVCSHNFVILTILCAALEIPLDRFRELRQGTAALNIL 180
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: UPI001CD01C77 (phosphoglycerate mutase family protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CD01C77) HSP 1 Score: 85.5 bits (210), Expect = 3.350e-17 Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 1
Query: 1 HSQTDFNALM--ICQGRRLNPPLNKVGREQA---GHLAAQVAVSAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINAL 522
H TDFN + QG +N PL +GREQA G + + A++ SP+VRA ETA I+Q P + ++ E D GR G A Y + V GE+ ++ R V A LL + G ++L V+H+ ++++ +A L +PL +R++ QDNCA+N +
Sbjct: 17 HGATDFNLKQPTVLQGSGINGPLAAIGREQATLTGEFLRRYSFDAVYASPMVRAMETAQIIQ---PGREITPVPEIVEADVGRWLGRDWEDIKAAEPEAYRLHLEDPSVHPYPEGESATDVAHRTVPALMNLLEQ-NLGNRILVVAHNIVIRVMVAHLYAIPLKQMRTIRQDNCAVNVI 191
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A3D4IG50_9BACT (Histidine phosphatase family protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D4IG50_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 7.050e-16 Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLAAQVA---VSAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEG--LPQLLAAACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLL-DVPLNMIRSLGQDNCAINALDYD 531
H +TD N I QGR +N PLN+ G QA L +++ + A++CSPL+RA +TA V S+P DL E+ +G EG L ++L A + W G + GGE+ +E+++ A A ++ G VL V+H L++ LA +L L+ + + N ++N L +D
Sbjct: 9 HGETDLNRAGIVQGRGVNAPLNENGLIQAEALRERLSNVWLDAVYCSPLLRAVQTAETVVRSHPYLNPRKMTDLEEISWGICEGKRLDEVLRKA-FDNVRLQWQNGDFEAKISGGESASEVEKHAKRALMNIVSQ-HLGESVLIVTHGRFLRVLLAGILAGYGLSKMEQIKHTNTSLNVLTFD 189
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A6I7QFX2_9BACT (Histidine phosphatase family protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7QFX2_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 1.650e-15 Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLAA---QVAVSAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINALDYDTVSGSFEAVLVN 567
H +TDFN + QGR ++ PLN+ G +QA ++ Q S + S L R+ +TA V+ + E L+E+ FG+ EG+P A+A L + AW G + GE+ E+ RA A L+ +G VL + H +++I L++ L LN + + N A+ + Y+ G+F+ V +N
Sbjct: 11 HGETDFNKKGLLQGRGIDAPLNETGHKQARAISEYLKQYNASNLVSSSLKRSWQTALPVEERTELETLKI-EALDEMHFGKFEGVPYKEASAELNEIHNAWVSGDVLRPIPQGESPQEVYDRANAAVEQLIEKYRDGTMVL-ILHGRLIRILLSSWLGYGLNNMHKIEHQNGALYQIVYN---GNFKPVYLN 197
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A7C6X9J5_9BACT (Histidine phosphatase family protein n=2 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C6X9J5_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 1.680e-15 Identity = 57/174 (32.76%), Postives = 94/174 (54.02%), Query Frame = 1
Query: 61 LNKVGREQAGHLAAQVA---VSAIFCSPLVRAHETAGIVQASNPTAIFSVSED-LNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINALDYDTVSGSFEAVLVNN 570
LN+ GREQAG +A ++A +SA++CS L RA +TA + A + + V++ L EV++G EG+ + A Y AW + + R GGE+ E++ R V A T + G V V+H S + L +L + ++ R +GQ+N A+N + Y+ G + L+N+
Sbjct: 29 LNERGREQAGCVAQRLADAELSAVYCSDLRRARDTAAAIAARH--GLEPVADPALREVNYGEWEGVSEEDVRAGWPDHYAAWKRDAEKVRIPGGESFGELRDRLVPAL-TAIAERHAGENVAVVAHKSSNRAFLCAVLGLSPSLYRRIGQENAAVNLITYE--DGRWRIDLIND 197
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Match: A0A1J5A449_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineae bacterium CG2_30_64_16 TaxID=1805005 RepID=A0A1J5A449_9CHLR) HSP 1 Score: 80.5 bits (197), Expect = 2.270e-15 Identity = 60/179 (33.52%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 1 HSQTDFNALMICQGRRLNPPLNKVGREQAGHLAAQVAV----SAIFCSPLVRAHETAGIVQASNPTAIFSVSEDLNEVDFGRAEGLPQLLAAACLAPTYVAWSKGQDVERAGGGENLAEIQQRAVTAAATLLRACDEGGQVLGVSHSSMLKITLATLLDVPLNMIRSLGQDNCAINALD 525
H +T++N ++ +GR + LN VG QA A +VA +AI+CSP+VRA +TA V A E L+++DFG+ +GL A A +W+ + R GGE LA+++ R+ TA T L V+ V H+ + ++ L +L + L LGQD CA+N +
Sbjct: 9 HGETEWNRVVRFRGRA-DISLNDVGLAQATATARRVAAEWQPAAIYCSPMVRARQTAQAV-AERVGLPVQTHEGLHDIDFGQLQGLTVDEAVARWPEVVRSWAATPEATRFPGGERLADLRGRS-TAMLTELTDRYPDQTVVLVGHTVINRVILLGVLGLGLERFWHLGQDTCAVNVFE 184 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4532.11391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4532.11391.1 >prot_H-paniculata_contig4532.11391.1 ID=prot_H-paniculata_contig4532.11391.1|Name=mRNA_H-paniculata_contig4532.11391.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp MICQGRRLNPPLNKVGREQAGHLAAQVAVSAIFCSPLVRAHETAGIVQASback to top mRNA from alignment at H-paniculata_contig4532:3673..4878+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4532.11391.1 ID=mRNA_H-paniculata_contig4532.11391.1|Name=mRNA_H-paniculata_contig4532.11391.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig4532:3673..4878+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4532:3673..4878+ >mRNA_H-paniculata_contig4532.11391.1 ID=mRNA_H-paniculata_contig4532.11391.1|Name=mRNA_H-paniculata_contig4532.11391.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig4532:3673..4878+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |