mRNA_H-paniculata_contig11783.1139.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11783.1139.1
Unique NamemRNA_H-paniculata_contig11783.1139.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: D7FNT7_ECTSI (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT7_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 5.610e-165
Identity = 238/326 (73.01%), Postives = 264/326 (80.98%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+VLPA APRLAVTLWFYGR  G P+         P+  S   VP  PA    + + DDTR +VRPLP+  G G  HA EASIFVS+VSYRDSEANPT+VDLF RA+NP RVSVGLVWQL+  V  D+A+ RATP  G   +RGG+VRSL MPA DAAGPSWARR AQS+WK E Y LQIDSHTRFRPGWDSYLI TLQ CPSFKP+LTTYPVGYQLPHKIPAGETRPT+LVPDGFG +GMLRQTGRL+LR A +PLPSPLWASGFSFS+SA+LVEVPYDP LRH FFGEE SMAAR++TRGWDFFAPPQ VVYHLW+R HR SFR
Sbjct:  266 HEVLPASAPRLAVTLWFYGRQLGLPAS--------PSTRSPSSVPPLPAPEQQLAAGDDTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATP--GGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPILTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFR 581          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A6H5L271_9PHAE (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L271_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 2.850e-164
Identity = 239/326 (73.31%), Postives = 265/326 (81.29%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+VLPA APRLAVTLWFYGR  G P+  +  A RP        VP  PA    +   DDTR  VRPLP  +G G  HA EASIFVS+VSYRDSEANPT+VDLF RA+NP RVSVGLVWQL+  V  D+A+RRATP  G   +RGG+VRSL MPA +AAGPSWARR AQSLWK E Y LQIDSHTRFRPGWDSYLI+TLQ CPSFKPVLTTYPVGY++PHKIPAGETRPT+LVPDGFG +GMLRQTGRL+LR A +PLPSPLWASGFSFS+SA+LVEVPYDP LRH FFGEE SMAAR++TRGWDFFAPPQ VVYHLW+R HR SFR
Sbjct:  266 HEVLPALAPRLAVTLWFYGRQLGLPA--SPSARRP------SSVPPLPAPEQQLAPGDDTRDNVRPLPPPDGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARAANPGRVSVGLVWQLEAGVAEDEAMRRATP--GGKEIRGGRVRSLFMPAVEAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIQTLQSCPSFKPVLTTYPVGYEMPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAMLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFR 581          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A835YQS0_9STRA (Procollagen-lysine 5-dioxygenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS0_9STRA)

HSP 1 Score: 299 bits (766), Expect = 4.010e-93
Identity = 174/352 (49.43%), Postives = 216/352 (61.36%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVT---------------VTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAG--ETRPTVLVPDGFGAEGMLRQTGRLMLRS--------AHEPLPSPLWASGFSFS-SSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+VLP+FAPR A+T+WFYGR   PP       A P A P+         APV+               +T+  DTR ++ PLP     G      + IFVSIVSYRD EA PTI DL   A+ P RV VGLV        A+            AL   G+V +++M A +AAGP WAR  A +LW+ E Y LQ DSH RFR  WD+YL+ TL+RCPS +P+LTTYP GY+LP+++P G  +T+ TVL P GFGA+GMLRQ  R + +         A EPL S LWA+GF+F  S ALL +  YDP LRHVFFGEE +MAARL+T G+DF+APPQ V YHLW+RAHRPSFR
Sbjct:  219 HEVLPSFAPRFALTMWFYGR---PPR-----RAAPAAAPTML-------APVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPL----GDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPAL--RGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFR 549          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A329RXD0_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXD0_9STRA)

HSP 1 Score: 286 bits (732), Expect = 3.880e-88
Identity = 160/326 (49.08%), Postives = 207/326 (63.50%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+V+P +  R AVT+W+YG    PP    A+ AR  ALP    VP                   RPLP++ G+   HA  ASIFVSI SYRDSE   T+ +L  +A+ P RVS+G+  Q D D   DD     T A   +     KVR   +  + AAGP  AR  AQ LW+ E ++LQIDSH RFRPGWD +LI  L++CPS KP+LTTYP+GY LP++I + E RPT+L    F + GMLRQT +++ + + +PLPS  WA+GF+FSSS ++ EVPYD  LR +FFGEE SMAARL+T GWDFF P +TVVYHLW+R +RP F+
Sbjct:  269 HEVMPTYRERKAVTIWYYGE---PPEASPAI-ARSEALP----VP-------------------RPLPSITGNKSDHAERASIFVSIPSYRDSECRHTVDNLLTQATFPGRVSIGICLQTDDD---DD-----TRAYLESKYSSSKVRVHGVDFRKAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCPSPKPILTTYPLGYTLPNEI-SSECRPTLLCASTFDSLGMLRQTSKILAKISTKPLPSLFWAAGFAFSSSKVIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSETVVYHLWTRTYRPVFQ 558          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A833TAL9_PHYIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAL9_PHYIN)

HSP 1 Score: 278 bits (710), Expect = 6.730e-85
Identity = 152/326 (46.63%), Postives = 207/326 (63.50%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+V+P +  R AVT+W+YG+                  PS+       AAP + T   +T     PLP+  G    HA +AS+FV+I SYRDSE   T+ +L  +A+ P R+S+G+  Q D +   DD     T A   +     +VR   +  ++AAGP  ARR AQ L++ E  +LQIDSH RFRPGWD +LI  L++CPS KP+LTTYP+GY LP++I + E RPT+L    F + GMLRQT +++ + + +PLPS  WA+GF+FSSSA++ EVPYD  LR +FFGEE SMAARL+T GWDFF P + VVYHLW+RA+RP F+
Sbjct:  275 HEVMPTYRERKAVTIWYYGK------------------PSQ-------AAPASRT---ETSSVPCPLPSTTGSNSDHAEQASVFVAIPSYRDSECRHTVDNLLAQATFPERISIGICLQTDDE---DD-----TQAYLESKYSTSQVRVHWVDYREAAGPCVARRQAQKLYQGEDLYLQIDSHMRFRPGWDCFLINELEKCPSAKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILAKKSTKPLPSLFWAAGFAFSSSAIIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSEAVVYHLWTRAYRPVFQ 563          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: W2QK95_PHYPN (Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK95_PHYPN)

HSP 1 Score: 275 bits (703), Expect = 7.480e-84
Identity = 149/326 (45.71%), Postives = 201/326 (61.66%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+V+P +  R AVT+W+YG+    PS  ++  AR   L     VP                   RPLP++ G+   H  + SIFV+I SYRDSE   T+ +L  RA+ P R+S+G+  Q D +     A  ++  +T    V+    R        AAGP  AR  AQ LW+ E ++LQIDSH RFRPGWD +LI  L +CPS KP+LTTYP+GY LP++I + E RPT+L    F + GMLRQT +++   + +PLPS  WA+GF+FSSS ++ +VPYD  LR +FFGEE SM ARL+T GWDFF P +TVVYHLW+RA+RP F+
Sbjct:  275 HEVMPTYRERKAVTIWYYGK----PSKASSALARTEVL----SVP-------------------RPLPSITGNEANHTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTD-ENDGTSAYLKSKYSTSKVCVQWVDYRQ-------AAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPSSKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILSTKSTKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQ 564          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A7S2SW69_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW69_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.350e-83
Identity = 166/355 (46.76%), Postives = 214/355 (60.28%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPS--------VLNALAARPPAL--PSRKGV-----------PTAPAAPVTVT---SSDDTRGRVRPLPAVEGDGRG------HAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFG-AEGMLRQTGRLMLRSAHEPLPSP-LWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRP 969
            H+VLPA+APR+AVT WFYG   G           +L++LA   P    P + GV           PTA A P ++     +  T      LP      R       H   ++IFVSI S+RDSE   T++DLF  A  P R++VG+V Q D    A + IR    A    L    +VR L M  + A GP  AR  AQ LW+ E Y LQIDSH RFRP WD+YL+  LQ+CPS KPVLTTYP GY LP+ +P  E+RPT+L P  +G A+G+LRQTG+L+      P+    LWA+GF+F+++A++ EVPYDP L  +FFGEE+SMAARL+T G+DFFAPP+ VVYHLW+R HRP
Sbjct:  185 HEVLPAWAPRIAVTTWFYGVLEGATPXXXXXXXXLLSSLALPSPVTKDPRKDGVGGLEVEGDQSSPTAAAHPESLLLLHHNVPTSAHPSSLPPCSPPRRSLQVSEDHDGNSTIFVSIASFRDSECQHTVLDLFRTAQYPERLTVGIVGQYD----AVEDIRCFDQAP-LPLAWARRVRVLHMDWQQAEGPCLARHLAQQLWRGEDYVLQIDSHMRFRPNWDTYLLHCLQQCPSSKPVLTTYPTGYTLPNHVP-DESRPTLLCPSHYGGADGVLRQTGKLLAARQSAPIACRGLWAAGFNFAAAAVIREVPYDPTLSFLFFGEEISMAARLWTHGYDFFAPPEAVVYHLWTRTHRP 533          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A662X1I4_9STRA (P4Hc domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1I4_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.750e-83
Identity = 152/328 (46.34%), Postives = 197/328 (60.06%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGR-NFGP-PSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+V+P +  R+AVT+W+YG     P PS+   L         RK   T P                 PLP   G+      + SIFV+I SYRDSE   T+ DL   A+ P R+S+G+  Q D     +D  R     T +      KVR   +  K AAGP  AR  AQ LW+ E Y+LQIDSH RFRPGWD +LI  L++CP+ KPVLTTYP+GY LP+++ + + RPT+L    F   GMLRQ+ + + + A EPLPS LWA+GF+FSSS ++ EVPYD  L+ +FFGEE SMAARL+T GWDFFAP +  VYHLW+R HRP F+
Sbjct:  201 HEVMPTYHERMAVTIWYYGEPKLSPKPSLQEGLV--------RKASVTLP-----------------PLPVKLGNQSDSEQQESIFVAIPSYRDSECRHTVDDLLATATFPDRISIGICLQSD----EEDGTRAYLGETYSP----SKVRVHYVDYKSAAGPCVARAQAQKLWQGERYYLQIDSHMRFRPGWDCFLIDQLEKCPATKPVLTTYPLGYTLPNEV-SSDCRPTILCASAFDKHGMLRQSSKTLAQKAKEPLPSLLWAAGFAFSSSDVIKEVPYDATLQFLFFGEEASMAARLWTSGWDFFAPTEATVYHLWARDHRPVFQ 494          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A2D4C2G2_PYTIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2G2_PYTIN)

HSP 1 Score: 268 bits (686), Expect = 2.130e-81
Identity = 152/327 (46.48%), Postives = 195/327 (59.63%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATP-ATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+VLPAF  R+A+T W+YG               PP  PS   V     AP T      T G                   SIFV+I SYRD E  PT++DLF +AS+P+R+SVG+  Q + +   +  +R A   A G    R  ++R   +   +AAGP  AR  AQSLW  E Y+LQIDSH RFR  WDS+LI  L RCPS K VLTTYP+GY LP  I + ++RPT+L    F  +G LRQ  + + + A  PLPS  WA+GF+FSSS ++ EVPYD +LR +FFGEE SM+ARL+T GWDFFAP +  +YHLWSRA+RP F+
Sbjct:  284 HEVLPAFHERMALTTWYYG---------------PPPSPSPSCV-----APATSRVERKTDG-------------------SIFVAIPSYRDPECAPTVIDLFRKASDPSRLSVGICLQSENEHKDELKLREAVASALGERSPRPEQLRIRWLHFSEAAGPCVARAEAQSLWTGEQYYLQIDSHMRFRDAWDSFLIDELHRCPSHKAVLTTYPLGYTLPDHI-SSDSRPTLLCASRFDEDGTLRQASKTLAKKADSPLPSLFWAAGFAFSSSQVVEEVPYDASLRFLFFGEESSMSARLWTHGWDFFAPREMPIYHLWSRAYRPVFQ 570          
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A485KTR2_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR2_9STRA)

HSP 1 Score: 266 bits (680), Expect = 2.750e-80
Identity = 163/353 (46.18%), Postives = 200/353 (56.66%), Query Frame = 1
Query:    1 HQVLPAFAPRLAVTLWFY-----------GRNFGPPSVLNALA-------ARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVR--GGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTR-------FRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978
            H+VLP    RLA+T WFY            R   P S   A A       +RPP + S    P            D    R  PLP         + + +IFVSI S+RDSE  PT+  LF  A+ PARV VGL  Q      ADD          TA V   G +VR   M   DA GP  AR AAQ LW+ E Y LQIDSH R       FRP WD+YL+  L RC + KP+LTTYP+GY LP++IP+ +TRPT+L    F   G+LRQTG+++  S   PLP   WA+GF+FS + ++  VPYDP+L H+FFGEE SMAARL+T G+DFFAPP+ VVYHLWSRAHRP F+
Sbjct:  262 HEVLPTTVDRLALTTWFYCNADDANIPHTTRTANPASATAAAAPKTFPRASRPPCIRSDDSQP---------LDVDMAPRRAPPLPT----SISPSPDDTIFVSIPSFRDSECAPTLQHLFATAACPARVVVGLCLQ-----HADD--------DDTAFVDKYGAQVRVTRMHHTDATGPCLARHAAQQLWRGERYHLQIDSHMRYESLVRSFRPHWDAYLVEQLHRCDATKPILTTYPMGYHLPNQIPS-DTRPTLLCASHFDTHGLLRQTGKVLKVSPPRPLPCSFWAAGFAFSEATVIQHVPYDPSLSHLFFGEENSMAARLWTHGYDFFAPPEAVVYHLWSRAHRPVFQ 587          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNT7_ECTSI5.610e-16573.01Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A6H5L271_9PHAE2.850e-16473.31Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A835YQS0_9STRA4.010e-9349.43Procollagen-lysine 5-dioxygenase (Fragment) n=1 Ta... [more]
A0A329RXD0_9STRA3.880e-8849.08Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
A0A833TAL9_PHYIN6.730e-8546.63Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
W2QK95_PHYPN7.480e-8445.71Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophth... [more]
A0A7S2SW69_9STRA1.350e-8346.76Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochro... [more]
A0A662X1I4_9STRA1.750e-8346.34P4Hc domain-containing protein n=1 Tax=Nothophytop... [more]
A0A2D4C2G2_PYTIN2.130e-8146.48Procollagen-lysine 5-dioxygenase n=1 Tax=Pythium i... [more]
A0A485KTR2_9STRA2.750e-8046.18Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11783contigH-paniculata_contig11783:675..4883 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score488.4
Seed ortholog evalue2.6e-135
Seed eggNOG ortholog2880.D7FNT7
KEGG koko:K12244
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-proline hydroxylation to 4-hydroxy-L-proline
EggNOG OGsKOG3710@1,KOG3710@2759
EC2.4.1.229
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Exons4
Model size978
Cds size978
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11783.1139.1prot_H-paniculata_contig11783.1139.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11783 675..4883 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928887.9014673-CDS-H-paniculata_contig11783:674..8241622928887.9014673-CDS-H-paniculata_contig11783:674..824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 675..824 -
1691480657.3577344-CDS-H-paniculata_contig11783:674..8241691480657.3577344-CDS-H-paniculata_contig11783:674..824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 675..824 -
1622928887.9150014-CDS-H-paniculata_contig11783:2298..25601622928887.9150014-CDS-H-paniculata_contig11783:2298..2560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 2299..2560 -
1691480657.3694074-CDS-H-paniculata_contig11783:2298..25601691480657.3694074-CDS-H-paniculata_contig11783:2298..2560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 2299..2560 -
1622928887.9261565-CDS-H-paniculata_contig11783:3704..40301622928887.9261565-CDS-H-paniculata_contig11783:3704..4030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 3705..4030 -
1691480657.3776762-CDS-H-paniculata_contig11783:3704..40301691480657.3776762-CDS-H-paniculata_contig11783:3704..4030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 3705..4030 -
1622928887.9438076-CDS-H-paniculata_contig11783:4643..48831622928887.9438076-CDS-H-paniculata_contig11783:4643..4883Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 4644..4883 -
1691480657.385872-CDS-H-paniculata_contig11783:4643..48831691480657.385872-CDS-H-paniculata_contig11783:4643..4883Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11783 4644..4883 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11783.1139.1

>prot_H-paniculata_contig11783.1139.1 ID=prot_H-paniculata_contig11783.1139.1|Name=mRNA_H-paniculata_contig11783.1139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAA
PVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIV
DLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSL
LMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQR
CPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLML
RSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYT
RGWDFFAPPQTVVYHLWSRAHRPSFR
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mRNA from alignment at H-paniculata_contig11783:675..4883-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11783.1139.1 ID=mRNA_H-paniculata_contig11783.1139.1|Name=mRNA_H-paniculata_contig11783.1139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4209bp|location=Sequence derived from alignment at H-paniculata_contig11783:675..4883- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCAGGTGTTGCCCGCCTTTGCCCCCCGACTGGCGGTAACCCTCTGGTT CTATGGGAGAAACTTCGGGCCTCCGTCGGTGCTTAACGCTCTAGCTGCAC GACCACCCGCGCTCCCATCACGGAAGGGTGTCCCCACGGCCCCGGCGGCG CCAGTTACGGTGACGTCGAGTGACGATACTCGCGGCAGAGTGCGGCCTCT TCCGGCCGTCGAGGGTGACGGGAGAGGGCACGCTTGGGAGGTGGGATAAG TCATTGAGTTGTCTGTCGGGAGCCGGAGGCGGGGAGGGGTCTGTGGTGGT TTTGTGCTCTCTGTCTGTTCCCCTATGTATATCTCGTTTGTCGTGTGTCT CTATCTGTATGCTTTCCTCTTGTATGGCTCGCTGTCTCATGCACAGATGG CACGGAGGCAAGACGTATACCTTTTCACGTGCTCTTACTCTCTATGTTTT TCCGAGTATTCTTTTTGTGCAGCGATGTCATGTGCGGAGGATTAATAAGG TATTGTAATGTTTCTTCCTTTTTTTTTCTTGTCTCCGTGCACCTTAATTC CTGATTCACACACACACACACACACACACACACACACACACACACACACA CACACACACACACACACACACCACATCACTGTGGGTGGGGGGCTTCAGGT CCCGCGCCAAAGCTAAAACACACCCAAAAACCTCGAGGCCACCCTCCTAA TATAAAAAAAACACCGCTTACCCCTTACCCCTTACCCTGCCCCACCAATT CATTTACTCGAATTGAACTCAGATCCACGCTTCTCCGAAATTATTGGTTA TCGAACAAACACCTGTTTACCCTCCCCCCCCCCCCCCCCCGAACATGCGC CAGGCTTCGATATTCGTGAGTATCGTGAGCTATCGAGACTCAGAGGCCAA TCCAACCATCGTCGATCTCTTCGAGCGCGCGTCGAACCCCGCCCGAGTGT CCGTCGGTTTGGTGTGGCAGCTAGACTTGGATGTACCGGCTGATGATGCC ATTAGGCGGGCGACGCCCGCCACAGGCACAGCCCTCGTCCGCGGCGGGAA GGTGCGATCGCTGCTCATGCCGGCGAAGGATGCCGCTGGGCCGTCCTGGG CGCGCCGTGCGGCCCAGTCTCTGTGGAAGAACGAGAGCTATTTCTTGCAG ATCGACAGTCACACCAGGTTTAGGCCGGGGTGAGTAAGGTAGTTGCCGTG TTTGCTGTTTGACACGCACGAAGGCTTGTGTGAGGTGCACGCGCGTGTGT GAGTGCATACGGTCATTTCACTTTAGTTCTTTGGTGTACAATAGCGCAAA TGGGATGGGGTCATGCCCTGTCAATCAACATCTGCGAGGTGAACGATGGC CATGGTTTTCCCAACAATAGGAAGCTCCCGGCCTGCGATGGAGTACGAGT GGGCACCCCCGTGTTTTCACAAAAGGTACTTGTACACTACCCTGTCTTCG GAGTGGAAAATGATTATTCCATGATAGTACGCAGGCGCTCGATGTAAAAA TCAGGAACAAGAAGCGTAAACAAACACAACATCGCTAACGCGAAAATATG TTTATTTAGATAGGAACACTCTCAGGAGGGTGATTTTCTCCGGAAGTGAC CACCTATCTAATGACACATACTGTAAGGCGATTCCACTCTTGGATTCGCG AGGTTCGGTATAGTTGCTGAGATGGGAGGCGTTTAGGCTCGGGCAGTTTC GACTCTCTGCGTTGACTGTCACCACCCAGCGCGACGAGGTACCTAAAGCG AGTTACTAGGGTTTTCTTGATTGTGATCAATCGAAGTCTAACATCTCAGA TTAGCTCAAGTCCTCTGCCCTAGGAAGATATCAAACGAAAGGGTAGGCGC TGCGTTCTTGGCTGCTGCCACCATAGAGCAGAAATAATTGTGTTTTGTTG TTTGATAATCCATCCATCTAATAATTTTTTTTCTGCTTGTCCTCTGACCC CGCTTTCCTTCACGCCCCAACTCACGCCTGAAGATTTCGCCGCTTGCGGT AAGCGCTCTCTGTGATCATTTGAACATACTATAGTATATTCACCTAGCAT TTCGACGGTTGCAACAGCAAAAGTTTGTGAACGATGTTGCGAGTGTATTC CAGTAGCCCTCTATCCTTACCCCCGTTTCTTGTGCAAGTGTCCGCGTTGC TCGTGTTGCGTGTACTTCTGCTTTGTACGAAAACCACGATGGAAGATCAC GGTGGACAAGCGCCTACAATTTTTTTTCGCATGACACATGGTCTCGCTTA CGCCCGACCCCCGTCGCTTCCCCACCCGCTCTTCCCTATCTCTCCTTTCC CCTCCCCCTCTCCCTCTTCCTAGGTGGGATTCATATCTGATCCGAACGCT CCAGAGGTGTCCTTCCTTTAAGCCTGTCCTGACCACTTACCCGGTCGGCT ACCAGCTCCCCCACAAGATCCCGGCGGGCGAAACCCGGCCGACAGTGCTC GTGCCCGACGGTTTCGGTGCAGAAGGGATGCTGAGGCAGACGGGGAGGTT GATGCTCCGCAGCGCCCACGAGCCACTGCCGTCTCCGCTATGGGCATCTG GGTTCAGTTTCAGCAGCAGTGCTTTGCTGGTTGAGGTGAGGGCTATTTGT TGGCTTGCTGGGTGATCGGACGGCGGTTGGGGGGGGCGGAGGAGGTTACC ATTTTTTTTCCGAGGTTTGGTGAACAGAGAACAAAATGGAGGAGTGGAAC CGCCTTCTTTTTAAAAACGGTTGGCAGTTGTGTTTTGCATTTTTGTTATG ATGGTGGTGGTGGTGATGGTGGTAGTGGTGGTGGTGGTGGTGGTGATGAT GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA TGATGATGATGATGATGGGCGACGTCACCGGGTCCTTCGGAAGTAGCTTT GACTACTATAATAGTAAAGTATCAAGGTTCGGAGCTCATGTGATTTCCGT TTGGATCATGGTTGGTAATTGATGCTCTATGTGCCGAAGGTGACAGCCGT CTTTCTAGTCGCATACCTCCTTCACACAGAACATCCTCAAGATATATTAG GCTAAGGTGATGGTCGTTTCGGAACTTGAATTAAGTGGTCGACTCGAGCG TCTTAAAACGTGTAGAATATAAAATAGGATTTCCAATGTTTATATGGCCA GAAAATTTACTCTCACTTCAGGTAAGTTTAGAAAAAGATAAATCTCTAAA CGGCCAGCTCATAGATGGCCACCATGTCCAGTCCACATGACGGCACAGAC AAGGAGCCTTCTCAGTACACACTAGAACAACGACAGATATCCACAGGGCA GATCAACAGAGACGCAACAGAGATGGAGACAGGGAGGGTCGGACAAACGA CGAACAGAAATTTTAGTAAATGTTTTTCAATTTGTTTGTTATACTCTTCT GTCATGGAGGCTGCCGTCTACACGCAGCATGCACACACACCGGAGTAGGG ACAGCGTTGGTACATGCGGAGGTGCTACACCAGGGCATAGGATGCGAGAG GCAGCCTGACGCAGAAAAGTGTGGGCAAGGCGTCAACCTGAACAAATCAA CAGCTAAAAACCGTTGGTGCATATAGATAGCCATTACACGTATACAACTC ATTACAGTACAAGTTCACAATTCAGTAGAATATCCGTATTTTTTCCGCGT CTGCACGTACCTCTGATGGCTATCTCTGAGAGTTTCTACAGGTCTGTGTA TATCTGTTGCCCGCTCGAATAACTGCCGTCAAGGACACCTCTCGACGTTG TTGCCATTCAATGTTGTATCATGTATGCGAGTGAGCGTAAGCTAGCCACG GCGATGGCGACGAGTCTGTGTATATAGAGCGAAACTTGAATGTTGATTTT CACGGTACCGCGACACCGTCGACGTGGTCACCGCCACTGGCGTAGCCGAG ACCTTTCCACTAGGTAATATGTTATTAATTGGTGTCTGGAAATAAAGGGA CCCATACTTTCGATGTTGTGGTGGTGGAAGATACTCAACTCTTTCCCCCC CCCCTCCCCCCGCCCCTTCTCTACCAATTGCCGTCTACCTGAAACCCGAC CGGCATGAGGTCCCTTACGACCCAAACCTGAGGCACGTGTTTTTTGGTGA AGAGGTTTCCATGGCGGCTCGCCTGTACACCCGGGGATGGGATTTTTTCG CCCCTCCTCAGACTGTGGTGTACCACCTGTGGAGCAGGGCGCATCGTCCC AGCTTCCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig11783:675..4883-

>mRNA_H-paniculata_contig11783.1139.1 ID=mRNA_H-paniculata_contig11783.1139.1|Name=mRNA_H-paniculata_contig11783.1139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at H-paniculata_contig11783:675..4883- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATCAGGTGTTGCCCGCCTTTGCCCCCCGACTGGCGGTAACCCTCTGGTT
CTATGGGAGAAACTTCGGGCCTCCGTCGGTGCTTAACGCTCTAGCTGCAC
GACCACCCGCGCTCCCATCACGGAAGGGTGTCCCCACGGCCCCGGCGGCG
CCAGTTACGGTGACGTCGAGTGACGATACTCGCGGCAGAGTGCGGCCTCT
TCCGGCCGTCGAGGGTGACGGGAGAGGGCACGCTTGGGAGCATCAGGTGT
TGCCCGCCTTTGCCCCCCGACTGGCGGTAACCCTCTGGTTCTATGGGAGA
AACTTCGGGCCTCCGTCGGTGCTTAACGCTCTAGCTGCACGACCACCCGC
GCTCCCATCACGGAAGGGTGTCCCCACGGCCCCGGCGGCGCCAGTTACGG
TGACGTCGAGTGACGATACTCGCGGCAGAGTGCGGCCTCTTCCGGCCGTC
GAGGGTGACGGGAGAGGGCACGCTTGGGAGGCTTCGATATTCGTGAGTAT
CGTGAGCTATCGAGACTCAGAGGCCAATCCAACCATCGTCGATCTCTTCG
AGCGCGCGTCGAACCCCGCCCGAGTGTCCGTCGGTTTGGTGTGGCAGCTA
GACTTGGATGTACCGGCTGATGATGCCATTAGGCGGGCGACGCCCGCCAC
AGGCACAGCCCTCGTCCGCGGCGGGAAGGTGCGATCGCTGCTCATGCCGG
CGAAGGATGCCGCTGGGCCGTCCTGGGCGCGCCGTGCGGCCCAGTCTCTG
TGGAAGAACGAGAGCTATTTCTTGCAGATCGACAGTCACACCAGGTTTAG
GCCGGGGCTTCGATATTCGTGAGTATCGTGAGCTATCGAGACTCAGAGGC
CAATCCAACCATCGTCGATCTCTTCGAGCGCGCGTCGAACCCCGCCCGAG
TGTCCGTCGGTTTGGTGTGGCAGCTAGACTTGGATGTACCGGCTGATGAT
GCCATTAGGCGGGCGACGCCCGCCACAGGCACAGCCCTCGTCCGCGGCGG
GAAGGTGCGATCGCTGCTCATGCCGGCGAAGGATGCCGCTGGGCCGTCCT
GGGCGCGCCGTGCGGCCCAGTCTCTGTGGAAGAACGAGAGCTATTTCTTG
CAGATCGACAGTCACACCAGGTTTAGGCCGGGGTGGGATTCATATCTGAT
CCGAACGCTCCAGAGGTGTCCTTCCTTTAAGCCTGTCCTGACCACTTACC
CGGTCGGCTACCAGCTCCCCCACAAGATCCCGGCGGGCGAAACCCGGCCG
ACAGTGCTCGTGCCCGACGGTTTCGGTGCAGAAGGGATGCTGAGGCAGAC
GGGGAGGTTGATGCTCCGCAGCGCCCACGAGCCACTGCCGTCTCCGCTAT
GGGCATCTGGGTTCAGTTTCAGCAGCAGTGCTTTGCTGGTTGAGGTGGGA
TTCATATCTGATCCGAACGCTCCAGAGGTGTCCTTCCTTTAAGCCTGTCC
TGACCACTTACCCGGTCGGCTACCAGCTCCCCCACAAGATCCCGGCGGGC
GAAACCCGGCCGACAGTGCTCGTGCCCGACGGTTTCGGTGCAGAAGGGAT
GCTGAGGCAGACGGGGAGGTTGATGCTCCGCAGCGCCCACGAGCCACTGC
CGTCTCCGCTATGGGCATCTGGGTTCAGTTTCAGCAGCAGTGCTTTGCTG
GTTGAGGTCCCTTACGACCCAAACCTGAGGCACGTGTTTTTTGGTGAAGA
GGTTTCCATGGCGGCTCGCCTGTACACCCGGGGATGGGATTTTTTCGCCC
CTCCTCAGACTGTGGTGTACCACCTGTGGAGCAGGGCGCATCGTCCCAGC
TTCCGGGTCCCTTACGACCCAAACCTGAGGCACGTGTTTTTTGGTGAAGA
GGTTTCCATGGCGGCTCGCCTGTACACCCGGGGATGGGATTTTTTCGCCC
CTCCTCAGACTGTGGTGTACCACCTGTGGAGCAGGGCGCATCGTCCCAGC
TTCCGG
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