mRNA_H-paniculata_contig11783.1139.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: D7FNT7_ECTSI (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT7_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 5.610e-165 Identity = 238/326 (73.01%), Postives = 264/326 (80.98%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+VLPA APRLAVTLWFYGR G P+ P+ S VP PA + + DDTR +VRPLP+ G G HA EASIFVS+VSYRDSEANPT+VDLF RA+NP RVSVGLVWQL+ V D+A+ RATP G +RGG+VRSL MPA DAAGPSWARR AQS+WK E Y LQIDSHTRFRPGWDSYLI TLQ CPSFKP+LTTYPVGYQLPHKIPAGETRPT+LVPDGFG +GMLRQTGRL+LR A +PLPSPLWASGFSFS+SA+LVEVPYDP LRH FFGEE SMAAR++TRGWDFFAPPQ VVYHLW+R HR SFR Sbjct: 266 HEVLPASAPRLAVTLWFYGRQLGLPAS--------PSTRSPSSVPPLPAPEQQLAAGDDTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATP--GGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPILTTYPVGYQLPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFR 581
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A6H5L271_9PHAE (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L271_9PHAE) HSP 1 Score: 483 bits (1244), Expect = 2.850e-164 Identity = 239/326 (73.31%), Postives = 265/326 (81.29%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+VLPA APRLAVTLWFYGR G P+ + A RP VP PA + DDTR VRPLP +G G HA EASIFVS+VSYRDSEANPT+VDLF RA+NP RVSVGLVWQL+ V D+A+RRATP G +RGG+VRSL MPA +AAGPSWARR AQSLWK E Y LQIDSHTRFRPGWDSYLI+TLQ CPSFKPVLTTYPVGY++PHKIPAGETRPT+LVPDGFG +GMLRQTGRL+LR A +PLPSPLWASGFSFS+SA+LVEVPYDP LRH FFGEE SMAAR++TRGWDFFAPPQ VVYHLW+R HR SFR Sbjct: 266 HEVLPALAPRLAVTLWFYGRQLGLPA--SPSARRP------SSVPPLPAPEQQLAPGDDTRDNVRPLPPPDGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARAANPGRVSVGLVWQLEAGVAEDEAMRRATP--GGKEIRGGRVRSLFMPAVEAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIQTLQSCPSFKPVLTTYPVGYEMPHKIPAGETRPTLLVPDGFGPDGMLRQTGRLLLRKARDPLPSPLWASGFSFSASAMLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFR 581
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A835YQS0_9STRA (Procollagen-lysine 5-dioxygenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS0_9STRA) HSP 1 Score: 299 bits (766), Expect = 4.010e-93 Identity = 174/352 (49.43%), Postives = 216/352 (61.36%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVT---------------VTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAG--ETRPTVLVPDGFGAEGMLRQTGRLMLRS--------AHEPLPSPLWASGFSFS-SSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+VLP+FAPR A+T+WFYGR PP A P A P+ APV+ +T+ DTR ++ PLP G + IFVSIVSYRD EA PTI DL A+ P RV VGLV A+ AL G+V +++M A +AAGP WAR A +LW+ E Y LQ DSH RFR WD+YL+ TL+RCPS +P+LTTYP GY+LP+++P G +T+ TVL P GFGA+GMLRQ R + + A EPL S LWA+GF+F S ALL + YDP LRHVFFGEE +MAARL+T G+DF+APPQ V YHLW+RAHRPSFR Sbjct: 219 HEVLPSFAPRFALTMWFYGR---PPR-----RAAPAAAPTML-------APVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPL----GDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPAL--RGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFR 549
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A329RXD0_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXD0_9STRA) HSP 1 Score: 286 bits (732), Expect = 3.880e-88 Identity = 160/326 (49.08%), Postives = 207/326 (63.50%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+V+P + R AVT+W+YG PP A+ AR ALP VP RPLP++ G+ HA ASIFVSI SYRDSE T+ +L +A+ P RVS+G+ Q D D DD T A + KVR + + AAGP AR AQ LW+ E ++LQIDSH RFRPGWD +LI L++CPS KP+LTTYP+GY LP++I + E RPT+L F + GMLRQT +++ + + +PLPS WA+GF+FSSS ++ EVPYD LR +FFGEE SMAARL+T GWDFF P +TVVYHLW+R +RP F+ Sbjct: 269 HEVMPTYRERKAVTIWYYGE---PPEASPAI-ARSEALP----VP-------------------RPLPSITGNKSDHAERASIFVSIPSYRDSECRHTVDNLLTQATFPGRVSIGICLQTDDD---DD-----TRAYLESKYSSSKVRVHGVDFRKAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCPSPKPILTTYPLGYTLPNEI-SSECRPTLLCASTFDSLGMLRQTSKILAKISTKPLPSLFWAAGFAFSSSKVIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSETVVYHLWTRTYRPVFQ 558
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A833TAL9_PHYIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAL9_PHYIN) HSP 1 Score: 278 bits (710), Expect = 6.730e-85 Identity = 152/326 (46.63%), Postives = 207/326 (63.50%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+V+P + R AVT+W+YG+ PS+ AAP + T +T PLP+ G HA +AS+FV+I SYRDSE T+ +L +A+ P R+S+G+ Q D + DD T A + +VR + ++AAGP ARR AQ L++ E +LQIDSH RFRPGWD +LI L++CPS KP+LTTYP+GY LP++I + E RPT+L F + GMLRQT +++ + + +PLPS WA+GF+FSSSA++ EVPYD LR +FFGEE SMAARL+T GWDFF P + VVYHLW+RA+RP F+ Sbjct: 275 HEVMPTYRERKAVTIWYYGK------------------PSQ-------AAPASRT---ETSSVPCPLPSTTGSNSDHAEQASVFVAIPSYRDSECRHTVDNLLAQATFPERISIGICLQTDDE---DD-----TQAYLESKYSTSQVRVHWVDYREAAGPCVARRQAQKLYQGEDLYLQIDSHMRFRPGWDCFLINELEKCPSAKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILAKKSTKPLPSLFWAAGFAFSSSAIIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSEAVVYHLWTRAYRPVFQ 563
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: W2QK95_PHYPN (Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK95_PHYPN) HSP 1 Score: 275 bits (703), Expect = 7.480e-84 Identity = 149/326 (45.71%), Postives = 201/326 (61.66%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+V+P + R AVT+W+YG+ PS ++ AR L VP RPLP++ G+ H + SIFV+I SYRDSE T+ +L RA+ P R+S+G+ Q D + A ++ +T V+ R AAGP AR AQ LW+ E ++LQIDSH RFRPGWD +LI L +CPS KP+LTTYP+GY LP++I + E RPT+L F + GMLRQT +++ + +PLPS WA+GF+FSSS ++ +VPYD LR +FFGEE SM ARL+T GWDFF P +TVVYHLW+RA+RP F+ Sbjct: 275 HEVMPTYRERKAVTIWYYGK----PSKASSALARTEVL----SVP-------------------RPLPSITGNEANHTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTD-ENDGTSAYLKSKYSTSKVCVQWVDYRQ-------AAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPSSKPILTTYPLGYTLPNEI-STECRPTLLCASSFDSLGMLRQTSKILSTKSTKPLPSLFWAAGFAFSSSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQ 564
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A7S2SW69_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW69_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.350e-83 Identity = 166/355 (46.76%), Postives = 214/355 (60.28%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPS--------VLNALAARPPAL--PSRKGV-----------PTAPAAPVTVT---SSDDTRGRVRPLPAVEGDGRG------HAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFG-AEGMLRQTGRLMLRSAHEPLPSP-LWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRP 969 H+VLPA+APR+AVT WFYG G +L++LA P P + GV PTA A P ++ + T LP R H ++IFVSI S+RDSE T++DLF A P R++VG+V Q D A + IR A L +VR L M + A GP AR AQ LW+ E Y LQIDSH RFRP WD+YL+ LQ+CPS KPVLTTYP GY LP+ +P E+RPT+L P +G A+G+LRQTG+L+ P+ LWA+GF+F+++A++ EVPYDP L +FFGEE+SMAARL+T G+DFFAPP+ VVYHLW+R HRP Sbjct: 185 HEVLPAWAPRIAVTTWFYGVLEGATPXXXXXXXXLLSSLALPSPVTKDPRKDGVGGLEVEGDQSSPTAAAHPESLLLLHHNVPTSAHPSSLPPCSPPRRSLQVSEDHDGNSTIFVSIASFRDSECQHTVLDLFRTAQYPERLTVGIVGQYD----AVEDIRCFDQAP-LPLAWARRVRVLHMDWQQAEGPCLARHLAQQLWRGEDYVLQIDSHMRFRPNWDTYLLHCLQQCPSSKPVLTTYPTGYTLPNHVP-DESRPTLLCPSHYGGADGVLRQTGKLLAARQSAPIACRGLWAAGFNFAAAAVIREVPYDPTLSFLFFGEEISMAARLWTHGYDFFAPPEAVVYHLWTRTHRP 533
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A662X1I4_9STRA (P4Hc domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1I4_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.750e-83 Identity = 152/328 (46.34%), Postives = 197/328 (60.06%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGR-NFGP-PSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+V+P + R+AVT+W+YG P PS+ L RK T P PLP G+ + SIFV+I SYRDSE T+ DL A+ P R+S+G+ Q D +D R T + KVR + K AAGP AR AQ LW+ E Y+LQIDSH RFRPGWD +LI L++CP+ KPVLTTYP+GY LP+++ + + RPT+L F GMLRQ+ + + + A EPLPS LWA+GF+FSSS ++ EVPYD L+ +FFGEE SMAARL+T GWDFFAP + VYHLW+R HRP F+ Sbjct: 201 HEVMPTYHERMAVTIWYYGEPKLSPKPSLQEGLV--------RKASVTLP-----------------PLPVKLGNQSDSEQQESIFVAIPSYRDSECRHTVDDLLATATFPDRISIGICLQSD----EEDGTRAYLGETYSP----SKVRVHYVDYKSAAGPCVARAQAQKLWQGERYYLQIDSHMRFRPGWDCFLIDQLEKCPATKPVLTTYPLGYTLPNEV-SSDCRPTILCASAFDKHGMLRQSSKTLAQKAKEPLPSLLWAAGFAFSSSDVIKEVPYDATLQFLFFGEEASMAARLWTSGWDFFAPTEATVYHLWARDHRPVFQ 494
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A2D4C2G2_PYTIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2G2_PYTIN) HSP 1 Score: 268 bits (686), Expect = 2.130e-81 Identity = 152/327 (46.48%), Postives = 195/327 (59.63%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATP-ATGTALVRGGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTRFRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+VLPAF R+A+T W+YG PP PS V AP T T G SIFV+I SYRD E PT++DLF +AS+P+R+SVG+ Q + + + +R A A G R ++R + +AAGP AR AQSLW E Y+LQIDSH RFR WDS+LI L RCPS K VLTTYP+GY LP I + ++RPT+L F +G LRQ + + + A PLPS WA+GF+FSSS ++ EVPYD +LR +FFGEE SM+ARL+T GWDFFAP + +YHLWSRA+RP F+ Sbjct: 284 HEVLPAFHERMALTTWYYG---------------PPPSPSPSCV-----APATSRVERKTDG-------------------SIFVAIPSYRDPECAPTVIDLFRKASDPSRLSVGICLQSENEHKDELKLREAVASALGERSPRPEQLRIRWLHFSEAAGPCVARAEAQSLWTGEQYYLQIDSHMRFRDAWDSFLIDELHRCPSHKAVLTTYPLGYTLPDHI-SSDSRPTLLCASRFDEDGTLRQASKTLAKKADSPLPSLFWAAGFAFSSSQVVEEVPYDASLRFLFFGEESSMSARLWTHGWDFFAPREMPIYHLWSRAYRPVFQ 570
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Match: A0A485KTR2_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR2_9STRA) HSP 1 Score: 266 bits (680), Expect = 2.750e-80 Identity = 163/353 (46.18%), Postives = 200/353 (56.66%), Query Frame = 1 Query: 1 HQVLPAFAPRLAVTLWFY-----------GRNFGPPSVLNALA-------ARPPALPSRKGVPTAPAAPVTVTSSDDTRGRVRPLPAVEGDGRGHAWEASIFVSIVSYRDSEANPTIVDLFERASNPARVSVGLVWQLDLDVPADDAIRRATPATGTALVR--GGKVRSLLMPAKDAAGPSWARRAAQSLWKNESYFLQIDSHTR-------FRPGWDSYLIRTLQRCPSFKPVLTTYPVGYQLPHKIPAGETRPTVLVPDGFGAEGMLRQTGRLMLRSAHEPLPSPLWASGFSFSSSALLVEVPYDPNLRHVFFGEEVSMAARLYTRGWDFFAPPQTVVYHLWSRAHRPSFR 978 H+VLP RLA+T WFY R P S A A +RPP + S P D R PLP + + +IFVSI S+RDSE PT+ LF A+ PARV VGL Q ADD TA V G +VR M DA GP AR AAQ LW+ E Y LQIDSH R FRP WD+YL+ L RC + KP+LTTYP+GY LP++IP+ +TRPT+L F G+LRQTG+++ S PLP WA+GF+FS + ++ VPYDP+L H+FFGEE SMAARL+T G+DFFAPP+ VVYHLWSRAHRP F+ Sbjct: 262 HEVLPTTVDRLALTTWFYCNADDANIPHTTRTANPASATAAAAPKTFPRASRPPCIRSDDSQP---------LDVDMAPRRAPPLPT----SISPSPDDTIFVSIPSFRDSECAPTLQHLFATAACPARVVVGLCLQ-----HADD--------DDTAFVDKYGAQVRVTRMHHTDATGPCLARHAAQQLWRGERYHLQIDSHMRYESLVRSFRPHWDAYLVEQLHRCDATKPILTTYPMGYHLPNQIPS-DTRPTLLCASHFDTHGLLRQTGKVLKVSPPRPLPCSFWAAGFAFSEATVIQHVPYDPSLSHLFFGEENSMAARLWTHGYDFFAPPEAVVYHLWSRAHRPVFQ 587 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11783.1139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11783.1139.1 >prot_H-paniculata_contig11783.1139.1 ID=prot_H-paniculata_contig11783.1139.1|Name=mRNA_H-paniculata_contig11783.1139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp HQVLPAFAPRLAVTLWFYGRNFGPPSVLNALAARPPALPSRKGVPTAPAAback to top mRNA from alignment at H-paniculata_contig11783:675..4883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11783.1139.1 ID=mRNA_H-paniculata_contig11783.1139.1|Name=mRNA_H-paniculata_contig11783.1139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4209bp|location=Sequence derived from alignment at H-paniculata_contig11783:675..4883- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11783:675..4883- >mRNA_H-paniculata_contig11783.1139.1 ID=mRNA_H-paniculata_contig11783.1139.1|Name=mRNA_H-paniculata_contig11783.1139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at H-paniculata_contig11783:675..4883- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |