prot_H-paniculata_contig4526.11376.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4526.11376.1
Unique Name	prot_H-paniculata_contig4526.11376.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	390

Homology

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 1.050e-85
Identity = 134/203 (66.01%), Postives = 164/203 (80.79%), Query Frame = 0

Query:   68 HPRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILERNKKQEEEGCVLDRLHFPRDNTGRQST------DERLRCLAAQAAAAAMSKAQ 264
            HPRRWS EED RLR AV+++H  +WK+IA EV +RNHVQCLQRWKKVL PGLVKGQW+ EED+LL+S++NE H+NWGSLS R+PGRTSKQCRERWCHHLDP IVKGGWT+EEDQ I+S+ ++ GNKWA IAQ+L+GRTENATKIRWKILER  K+EEE      +H  ++ + R ++      D RLRCL +QAA +A+SK Q
Sbjct:   67 HPRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILERGMKKEEE------MHEDKETSSRGASSRPKRPDARLRCLDSQAATSALSKTQ 263

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.660e-85
Identity = 140/214 (65.42%), Postives = 170/214 (79.44%), Query Frame = 0

Query:   68 HPRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILERNKKQEEEGCVLDRLHFPRDNTGRQST------DERLRCLAAQAAAAAMSKAQQSIHNPIGIPE 275
            HPRRWS EED RLR AV+++H  NWK+IA EV +RNHVQCLQRWKKVL PGLVKGQW+ EED+LL+S++NE H+NWGSLS RIPGRTSKQCRERWCHHLDP IVKGGWT+ EDQ I+ + ++ GNKWA IAQ+L+GRTENATKIRWKILER  K+EEE       H  ++ + R ++      D RLRCLAAQAA +A+SK Q S+  P+G+P+
Sbjct:   16 HPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILEREMKKEEE------RHEDKETSSRGASSRPKRPDARLRCLAAQAATSALSKTQSSL-GPVGVPK 222

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.600e-69
Identity = 122/228 (53.51%), Postives = 153/228 (67.11%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILERNKKQEEEGCVLDRLHFPRDNTGRQSTDERLRCLAAQAAAAAMSKAQ----QSIHNPIGIPENPAAVKRVLAEKNLGKL 292
            PR+W+  ED  LR+AV K+ E+NWKDIA EVG+RNHVQCLQRWKKVL PGLVKGQWS  ED  L+ L+ +  +NWG L+ ++PGRTSKQCRERW HHLDP++ KG +T EED TIL +  E GNKW+ IA++L GRTENA KIRWK L+R ++    G    ++        R   D  L+ LAAQAA AA++KAQ    Q    P G P +P  V ++  E    KL
Sbjct:   27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNAGSGRGQAQIR------SRNHPDSHLKVLAAQAAVAAIAKAQLHCGQEGGLPAGYPRDPDLVTKIHEEHEQRKL 248

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 199 bits (507), Expect = 1.480e-59
Identity = 92/148 (62.16%), Postives = 112/148 (75.68%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKIL 216
            P+RW+ EED +LR AV++H E NWK IA EV  RNH QCLQRW KVLAPGLVKG W  +ED+LL  L+ E  +NWG ++TRIPGRTSKQCRERW +HLDP+IV+G ++ EED+ IL      GN+W+ IA  L GRTE+A KIRWK L
Sbjct:    9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 156

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 201 bits (512), Expect = 2.770e-59
Identity = 97/160 (60.62%), Postives = 117/160 (73.12%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILERNKKQEEEGCV 228
            P+RW+ EED +LR AV +H E NWK IA EV  RNH QCLQRW KVLAPGLVKG W  EED+LL  L+ E  +NWG ++TRIPGRTSKQCRERW +HLDP+I++G ++ EED+ IL      GN+W+ IA  L GRTE+A KIRWK L R +K    GCV
Sbjct:   82 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRK----GCV 237

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.130e-58
Identity = 94/148 (63.51%), Postives = 113/148 (76.35%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKIL 216
            P+RW++EED +LR AV +H E NWK IA EV  RNH QCLQRW KVLAPGLVKG W  +EDELL  L+ E  +NWG ++TRIPGRTSKQCRERW +HLDP+IV+G +T+EED+ IL      GN+W+ IA  L GRTE+A KIRWK L
Sbjct:   91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL 238

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 3.170e-57
Identity = 94/153 (61.44%), Postives = 116/153 (75.82%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILERNKK 221
            PRRWSK ED  LR AV++  E NWK IA +V  RNH QCLQRW KVL PGL+KG W+ EED  L +L+ E  +NWG +++ IPGRTSKQCRERWC+HLDPNI KG +T+EEDQ I+ M  + GN+W+ IAQ L+GRTE+A KIRWK L R ++
Sbjct:  108 PRRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRR 260

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.290e-57
Identity = 90/148 (60.81%), Postives = 111/148 (75.00%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKIL 216
            P+RW+  ED +LR+AV +H E NWK IA EV  RNH QCLQRW KVLAPGLVKG W  +EDELL  L+ E  +NWG ++TRIPGRTSKQCRERW +HLDP+I++G +++ ED+ IL      GN+W+ IA  L GRTE+A KIRWK L
Sbjct:   99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSL 246

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 8.200e-57
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILER 218
            P +WS EED RLR+AV +  EA WKDIA+ V +RNHVQCLQRWKKVL PGLVKGQWS EED+ L+ L+ +  +NWG +++ + GRTSKQCRERWCHHLDP + KGG+T EED+ I+ +  E GN+WA IA+ L GRTENA KIRWK L R
Sbjct:  100 PVKWSAEEDRRLRDAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNR 249

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BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.320e-56
Identity = 95/153 (62.09%), Postives = 115/153 (75.16%), Query Frame = 0

Query:   69 PRRWSKEEDARLRNAVDKHHEANWKDIATEVGSRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRIPGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQNLNGRTENATKIRWKILERNKK 221
            PRRWSK ED  LR AV++  E NWK IA +V  RNH QCLQRW KVL PGL+KG W+ EED  L +L+ E  +NWG +++ IPGRTSKQCRERWC+HLDPNI KG +T+EEDQ I+ M  + GN+W+ IAQ L GRTE+A KIRWK L R K+
Sbjct:   97 PRRWSKAEDESLRLAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTKR 249

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4526.11376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K458_9PHAE	1.050e-85	66.01	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FQG8_ECTSI	1.660e-85	65.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2UU49_9STRA	3.600e-69	53.51	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
H3G911_PHYRM	1.480e-59	62.16	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
D0NJN5_PHYIT	2.770e-59	60.63	Myb-like DNA-binding protein, putative n=2 Tax=Phy...	[more]
A0A2P4Y3D9_9STRA	1.130e-58	63.51	Myb-like DNA-binding protein (Fragment) n=1 Tax=Ph...	[more]
A0A418B0H6_9STRA	3.170e-57	61.44	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A3M6VKU0_9STRA	3.290e-57	60.81	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
D8LSJ8_ECTSI	8.200e-57	64.00	Myb-like DNA-binding protein, putative n=2 Tax=Ect...	[more]
A0A6G0XBC5_9STRA	1.320e-56	62.09	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 120..168 e-value: 9.6E-10 score: 48.4 coord: 68..117 e-value: 1.9E-10 score: 50.7 coord: 171..219 e-value: 5.8E-11 score: 52.4
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 70..115 e-value: 1.9E-10 score: 40.8
None	No IPR available	GENE3D	1.10.10.60		coord: 70..118 e-value: 5.7E-16 score: 60.3
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 124..181 e-value: 1.4E-15 score: 57.3
None	No IPR available	GENE3D	1.10.10.60		coord: 174..239 e-value: 4.9E-15 score: 57.1
None	No IPR available	GENE3D	1.10.10.60		coord: 119..171 e-value: 1.4E-19 score: 71.5
None	No IPR available	PANTHER	PTHR45614:SF29		coord: 120..240 coord: 70..135
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 120..240 coord: 70..135
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 171..221 score: 14.953
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 64..115 score: 14.007
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 116..170 score: 20.729
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 70..143
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 147..221

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4526	contig	H-paniculata_contig4526:4670..15623 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4526.11376.1	mRNA_H-paniculata_contig4526.11376.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4526 3893..15623 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4526.11376.1 ID=prot_H-paniculata_contig4526.11376.1|Name=mRNA_H-paniculata_contig4526.11376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=390bp
MATIKSSYAVSSEKFQGQGANEPQDSRNGKATVRPRRSDANVSTYRYPAY
SAHTSSDDDDGHHSTDGHPRRWSKEEDARLRNAVDKHHEANWKDIATEVG
SRNHVQCLQRWKKVLAPGLVKGQWSREEDELLISLMNEEHQNWGSLSTRI
PGRTSKQCRERWCHHLDPNIVKGGWTKEEDQTILSMHEEFGNKWATIAQN
LNGRTENATKIRWKILERNKKQEEEGCVLDRLHFPRDNTGRQSTDERLRC
LAAQAAAAAMSKAQQSIHNPIGIPENPAAVKRVLAEKNLGKLDLSAKPPA
LPAKRRSMLSNSLTDALHDTRLGRRGSGGGREREGAQESSRSRVQKKKIK
LGGSGINNRNSKSSIYEVRSALLEDVGGAGSGSTVNTKGE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf