prot_H-paniculata_contig4523.11373.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4523.11373.1
Unique Nameprot_H-paniculata_contig4523.11373.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length749
Homology
BLAST of mRNA_H-paniculata_contig4523.11373.1 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 3.850e-110
Identity = 257/579 (44.39%), Postives = 319/579 (55.09%), Query Frame = 0
Query:  186 GIAVDFASQSIPTEYM------TKAPEPGRRGKRTGMGMDDVGRLLAGRRAEQ-SRRVPDLGFVARLGMAADRAISSASPGHLMEMCRVRSPSPTARRLLLALVVALGLRWRRWSDVRMNLLGNKSELKGFLLRFDKDRPGLTSGDLRPFVEDPDLSPAQVKQVAVCMVWLSRWLRSLYDYLLAREGK---ITATPEIFPPASTRRRAKRHSHREAHKKGQPLSPRPRAHRAGVARSRSRDDVDRGGRRGFSPSKNAAEAEKTREAAALASADLAPGGATTRPLSSNALPRQKQQNETAVVPGERHEHQDHEHNRGGAES----SQALATRVAGSSSIPKSLAMVTGGVGGVNRGDGVREAVGAGERRAGSRVLVGDRKGGEGAPTMEASLVGGDSNAESEWTAGTVTSRGDVLEAATDDQVDIGSWVREEGSEGFSARTRGRRV-------ERRGSAVRGSGFSQPTTTLAAGGDRAKGGGERARSHQKVHLKQRGDRSGVISNKGNWSMTSCSDGCLVAHVHKGRTPTHFANPKARRPLVGRHNPILANRRWPPPVEVKPRELTEQRSAFSLEHSFL 743
            G  +DF+SQSI TEYM      +  P PGRRGKR+GMG+D VGRLLAGRRAE+ +R++PD   VARLG AADRA+ + S GHL EMCR++SP    RRL+L LV+ALGLRWRRWSD+R +LLGNK EL+GFL RF+KDR GL S  L PFVEDP LSPA+V++VA CMVW+ RWL +L+DYL  +EGK   +   P    PA++R RAK    R+        S   RAH  G        D    GR G  P   A E                 GG+ T+P  S           T  +  ++H+ Q H H RGG       S+A ATR    S+ P       G   G +RG+G R   G G R            GG+G        V GD  +ES+WT GTVTSRGDVL   T+DQVDIGS V   G +G   +   +                 G   S P   + + GD A+  G      ++  L  +G R G +    +   T  S  C+  H HKGRTP+  ANPKARRP+   H+PILAN RWPPPV+V  +E TEQRSA+SLEHSFL
Sbjct:  476 GRTLDFSSQSILTEYMDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRALGAGSLGHLSEMCRLKSPPLACRRLMLGLVIALGLRWRRWSDIRTHLLGNKPELQGFLKRFNKDRAGLASTALLPFVEDPSLSPAEVRRVAACMVWVPRWLHALHDYLAVKEGKELDVDTMPMFQEPATSRSRAKLARRRQ--------SSGCRAH--GTVPGTVPPDGASKGREGRRP--GAGE-----------------GGSGTQPRKSGTAAAAGATAATMGLSEQKHD-QGHHHGRGGTRKTRRPSRAAATR-GDDSTCPPGSTPTGGDTEGGSRGEGFRY-FGEGGR------------GGDGGKVD----VDGDLESESQWTVGTVTSRGDVLRTPTEDQVDIGSSVVVGGGKGNVRKAPHKHAGXXXXXXXXXXXXXXGVPASPPRRRVRSTGDAARRAGTGTLGFEET-LAPKGGRRGSVRRGLSRGDTQASHACIYRHKHKGRTPSRVANPKARRPVQAAHDPILANTRWPPPVDVPAQERTEQRSAYSLEHSFL 1005          
BLAST of mRNA_H-paniculata_contig4523.11373.1 vs. uniprot
Match: A0A6H5JPQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ9_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.140e-19
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0
Query:  676 TSCSDGCLVAHVHKGRTPTHFANPKARRPLVGRHNPILANRRWPPPVEVKPRELTEQRSAFSLEHSFL 743
            T  S  C+  H  KGRTP+  ANPKARRP+   H+PILAN RWPPPV+V  +E TEQRSA+SLEHS L
Sbjct:   21 TQVSHACIYRHKLKGRTPSRVANPKARRPVQAAHDPILANIRWPPPVDVPAQERTEQRSAYSLEHSSL 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4523.11373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMZ6_ECTSI3.850e-11044.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPQ9_9PHAE4.140e-1963.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4523contigH-paniculata_contig4523:5109..14150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4523.11373.1mRNA_H-paniculata_contig4523.11373.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4523 4780..14570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4523.11373.1 ID=prot_H-paniculata_contig4523.11373.1|Name=mRNA_H-paniculata_contig4523.11373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=749bp
MPTGTRTTRNVLRRSGDALCDPSLPEHEPECPRCTATSGAGYEIVREAWR
DDEPGGEKRDQQQRQQEQHQRWQRRRQRQHEPLGRREEGVQTLGKVEVQE
ERKSRAALESKAVEASQRNDYHRCGSSAGEQGDSVGFEEWGRDGRCGTGA
ARLGGGTSCGRREETEGYGRRSEGLRKEGLEERERGIAVDFASQSIPTEY
MTKAPEPGRRGKRTGMGMDDVGRLLAGRRAEQSRRVPDLGFVARLGMAAD
RAISSASPGHLMEMCRVRSPSPTARRLLLALVVALGLRWRRWSDVRMNLL
GNKSELKGFLLRFDKDRPGLTSGDLRPFVEDPDLSPAQVKQVAVCMVWLS
RWLRSLYDYLLAREGKITATPEIFPPASTRRRAKRHSHREAHKKGQPLSP
RPRAHRAGVARSRSRDDVDRGGRRGFSPSKNAAEAEKTREAAALASADLA
PGGATTRPLSSNALPRQKQQNETAVVPGERHEHQDHEHNRGGAESSQALA
TRVAGSSSIPKSLAMVTGGVGGVNRGDGVREAVGAGERRAGSRVLVGDRK
GGEGAPTMEASLVGGDSNAESEWTAGTVTSRGDVLEAATDDQVDIGSWVR
EEGSEGFSARTRGRRVERRGSAVRGSGFSQPTTTLAAGGDRAKGGGERAR
SHQKVHLKQRGDRSGVISNKGNWSMTSCSDGCLVAHVHKGRTPTHFANPK
ARRPLVGRHNPILANRRWPPPVEVKPRELTEQRSAFSLEHSFLHSSGR*
back to top