prot_H-paniculata_contig4522.11372.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4522.11372.1
Unique Nameprot_H-paniculata_contig4522.11372.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length656
Homology
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BLAST of mRNA_H-paniculata_contig4522.11372.1 vs. uniprot
Match: D7FQ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ62_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.340e-31
Identity = 72/106 (67.92%), Postives = 83/106 (78.30%), Query Frame = 0 
Query:   28 RARDDGTGRRAERGRLSTLLDQLKDEIEFHAMSKRDTDLELKRVRQRHRLMEDRVQEEKSKVTAAEGRTSKLQAKFRELTEKNRALGDENTQLRQILQQLHDSGFP 133
            R +DDGTGRRAERGRLSTLLDQLKDEI+FHA +KRD DLELKRVRQRHRLMEDR  EEK K  A+E + +KLQAK       N+ L +ENT+L+QILQQ+ D   P
Sbjct:   38 RVKDDGTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAK-------NKFLSEENTKLKQILQQIQDPRSP 136
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BLAST of mRNA_H-paniculata_contig4522.11372.1 vs. uniprot
Match: A0A6H5LC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC44_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 5.840e-26
Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = 0 
Query:   33 GTGRRAERGRLSTLLDQLKDEIEFHAMSKRDTDLELKRVRQRHRLMEDRVQEEKSKVTAAEGRTSKLQAKFRELTEKNRALGDENTQLRQILQQLHDSG 131
            G GRRAERGRLSTLLDQLKDEI+FHA +KRD DLELKRVRQRHRLMEDR  EEK K  A+E + +KLQAK       N+ L +ENT+L+QILQQ+ D+G
Sbjct:  398 GXGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAK-------NKFLSEENTKLKQILQQIQDAG 489
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BLAST of mRNA_H-paniculata_contig4522.11372.1 vs. uniprot
Match: A0A835YUG3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.210e-5
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 0 
Query:   36 RRAERGRLSTLLDQLKDEIEFHAMSKRDTDLELKRVRQRHRLMEDRVQEEKSKVTAAEGRTSKLQAKFRELTEKNRALGDENTQLRQILQQLHDSGFPLPKP 137
            RR +  RL  LL  L+ E++    ++RDT+LE+K +R+++R +E+R++ E ++  AAE +  + +A+       NRALGD+N  LR +L     +  P P P
Sbjct:  342 RRTDGARLGALLAALRAEVDAAGAARRDTELEMKVLREKNRSLEERLRGEAARAAAAEAKLERAKAR-------NRALGDDNAALRVLLCAAGVARLPSPPP 436
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4522.11372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ62_ECTSI1.340e-3167.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LC44_9PHAE5.840e-2668.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUG3_9STRA2.210e-535.29Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availablePANTHERPTHR21704:SF19coord: 144..494
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 144..494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4522contigH-paniculata_contig4522:10468..15630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4522.11372.1mRNA_H-paniculata_contig4522.11372.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4522 10468..15632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4522.11372.1 ID=prot_H-paniculata_contig4522.11372.1|Name=mRNA_H-paniculata_contig4522.11372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=656bp
GSQGPGGGGGGSGAGSIGGGSATSTPVRARDDGTGRRAERGRLSTLLDQL
KDEIEFHAMSKRDTDLELKRVRQRHRLMEDRVQEEKSKVTAAEGRTSKLQ
AKFRELTEKNRALGDENTQLRQILQQLHDSGFPLPKPNPAVPGPPQQQQQ
QPQQPQQKQQSSTPNGSSSPPNQKESGGAGSSNNANANSSASPAASNNSN
STGSSQSGMTPGAGGGGGGSMTSKSLSGNPTGKQTPPGQSLAPSQQQPHG
VQAPADGMWTRPGSLQPPQQQQQQQQQHQHQHNLSTVPQGGGSSRGLPIG
IGHANRVSTVVAGMEDQRSPQRRDSFDPKPEPTAPKGLHWRRETHTGVLS
GGMAMASNQNQGPWQGQSWTQAQTGGQAMGGAAGAGSGLGGGRPQQQQPP
TQAMQGQSSGRGQPLPQAQQGMHGGQGQGGGRGGQGQQGQGQGMQGTTPG
RGQGGAAPPPVPPSQRTSTSLQKPRGSVPTHVSGQQQQQQQQQTGMQTGL
KNHRRSDSGERLSGERLSGIAASLANSNKASAANGSSGGAASGVSGVGVG
VGGQQTITTNNVGGGASGSASTRRHTSFVGLSPTGTGQVQSQGGTGGGGS
GLSSGTSGGGGSGVNVRAQSGGGGGGANNHVVHGGQMHSQSSGGSGGPGS
TGSGNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B