prot_H-paniculata_contig4522.11371.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4522.11371.1
Unique Nameprot_H-paniculata_contig4522.11371.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length329
Homology
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BLAST of mRNA_H-paniculata_contig4522.11371.1 vs. uniprot
Match: A0A6H5LC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC44_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.080e-7
Identity = 55/151 (36.42%), Postives = 69/151 (45.70%), Query Frame = 0 
Query:    6 EEDEYAIPIVQDGRLVPSPLSTPRARSRARTEGHDPFQHDPYHVRDATSGEVSR--------------------GEASSSATDGAAPYSSAXXXXXXXXXXXXXXXXXXXXXXGGEPVKRQKGRFKLRDLGEVPLSSQPAAGSAAVPPAGG 136
            E+ E+AI IVQDG+LVPSPLSTPRAR R++TE  D  Q     V D     V+                     G    ++ D A  Y SA                        EP KRQ+GRFKLRD+ EV  S+  +  S++  PAGG
Sbjct:  107 EDAEHAIAIVQDGKLVPSPLSTPRARRRSQTED-DSIQQTTA-VSDGNIQAVANAXXXXXXXXXXXXXXXATTFGSTGGNSPDSATAYPSA----------------------AAEPAKRQRGRFKLRDIREV--SASVSTSSSSTSPAGG 231
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4522.11371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LC44_9PHAE2.080e-736.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4522contigH-paniculata_contig4522:7214..10296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4522.11371.1mRNA_H-paniculata_contig4522.11371.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4522 7214..10297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4522.11371.1 ID=prot_H-paniculata_contig4522.11371.1|Name=mRNA_H-paniculata_contig4522.11371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp
QGHTSEEDEYAIPIVQDGRLVPSPLSTPRARSRARTEGHDPFQHDPYHVR
DATSGEVSRGEASSSATDGAAPYSSASAAAGAAGAAAASTAIAAAAAAGG
EPVKRQKGRFKLRDLGEVPLSSQPAAGSAAVPPAGGQAHPSQQSQTTGQQ
PGTVLDTSTNATVAAPATPATAAVEHPVSSGGSMVSTVTAAAVAPFDIQA
TMILLVDQNRHLLEKLATIAPEPPASAAGPGASAAHADGPASGLPSAAAT
GAGVLSSSSQMQTLTSATDNRQPFANNVALPGVDRGRTSSMTALTLQTPL
PPKPPTSHGGTSADRNVSPLMRETPAGWW
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