mRNA_H-paniculata_contig4521.11367.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 4.340e-191 Identity = 289/335 (86.27%), Postives = 311/335 (92.84%), Query Frame = 3
Query: 87 VRGKTAPSDMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAETQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTSSTSAGGKR 1091
R K PSDM+DFAMPPAGRSLPT+WVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLR HFLAVHTGT A+LPGLN MPS+R+ LQRNAS+KNPEKN+LPA++LK L++RLKAAYK FT+G+F ESRQEFDFILRAVPLVVGETRAEGN+LKELLSICREYVTAIRIKAAVAET+D VR+MELLAYFTCCNLQPAHLLLALR+AMASAFKGKNFITAASFAQRLLELPDLSSERHADLR KAQKVLQKSQQMARNEHTLDYDERNPFEVDC +LKPIYRG+PSCKCPYCG Y +AKG VCVTCGLS++G ETLGLVTTSS AGGKR
Sbjct: 926 ARAKAVPSDMADFAMPPAGRSLPTLWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRAHFLAVHTGTMASLPGLNVMPSLRSCLQRNASEKNPEKNSLPAVALKASVLLDRLKAAYKAFTMGSFAESRQEFDFILRAVPLVVGETRAEGNELKELLSICREYVTAIRIKAAVAETKDTVRSMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRIKAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGMVCVTCGLSQIGVETLGLVTTSS--AGGKR 1258
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE) HSP 1 Score: 506 bits (1304), Expect = 6.080e-169 Identity = 268/353 (75.92%), Postives = 289/353 (81.87%), Query Frame = 3
Query: 87 VRGKTAPSDMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQ---------------GAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAETQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAK---AQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTSSTSAGGKR 1091
R K PSDM+DFAMPPAGRSLPT+WVDNSSHAADHAAAGDFQ GAMQLLNRQIAVVNFEPLR HFLAVHTG A+LPGLNAMPS+R+ LQRNAS+KNPEKN+LPA++LK L++RLKAAYK FT+G+F ESRQEFDFILRAVPLVVGETRAEGN+LKE VRNMELLAYFTCCNLQPAHLLLALR+AMASAFKGKNFITAASFAQRLLELPDLSSERHADLR K AQKVLQKSQQMARNEHTLDYDERNPFEVDC +LKPIYRG+PSCKCPYCG Y +AKG+VCVTCGLS++G ETLGLVTTSS AGGKR
Sbjct: 566 ARAKAVPSDMADFAMPPAGRSLPTLWVDNSSHAADHAAAGDFQARIGRNAAVRWALTLGAMQLLNRQIAVVNFEPLRAHFLAVHTGAMASLPGLNAMPSLRSGLQRNASEKNPEKNSLPAVALKASVLLDRLKAAYKAFTMGSFAESRQEFDFILRAVPLVVGETRAEGNELKE------------------------VRNMELLAYFTCCNLQPAHLLLALRMAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRLKVGLAQKVLQKSQQMARNEHTLDYDERNPFEVDCQSLKPIYRGTPSCKCPYCGSAYPLSAKGTVCVTCGLSQIGVETLGLVTTSS--AGGKR 892
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA) HSP 1 Score: 392 bits (1008), Expect = 7.600e-122 Identity = 205/328 (62.50%), Postives = 245/328 (74.70%), Query Frame = 3
Query: 96 KTAPSDMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAETQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTSSTSA 1079
K + DF +P AG L W NS+HAADHAAAGD +GAM+LL+RQIA V F PLR H A+ G A+LPGL +PS+R LQR A+ S K+P L+ERLKA Y+ F G FG++R FD+IL A+PL V ET++EGN+LKELL I REYVTAIRIK A AE VR+MEL AYFT CNLQPAHLLLALR+AM +AFK KNFITAASFAQRLLELPDL+SER+A+LR KAQK+LQKSQQMARNE LDYDERNPF +DC LKPIYRG+P KCPYC +Y P + +VC TCG+S+VG ETLGLVTT+++++
Sbjct: 908 KAPEQTIGDFVVPAAGTPLTAHWCQNSTHAADHAAAGDIEGAMKLLSRQIAAVRFAPLRPHLFALLQGAAASLPGLAQVPSLRASLQRGAA-------VAERPSDKVPALLERLKAGYRAFLNGKFGDARDHFDYILHAIPLTVAETKSEGNELKELLDISREYVTAIRIKTASAEETAPVRSMELSAYFTHCNLQPAHLLLALRMAMGTAFKNKNFITAASFAQRLLELPDLASERNAELRDKAQKILQKSQQMARNEVDLDYDERNPFVIDCATLKPIYRGAPVVKCPYCSSSYSPASDKTVCQTCGISQVGVETLGLVTTTASTS 1228
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A7S2FV00_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV00_9STRA) HSP 1 Score: 347 bits (889), Expect = 2.700e-114 Identity = 180/301 (59.80%), Postives = 220/301 (73.09%), Query Frame = 3
Query: 162 WVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQR-NASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAETQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVT 1061
WV+NSSHAADH AAG + AMQLLNRQIAV NF PL+ FL V+ G ++PGL PS++ L R +ASD +LPA +KLP L++ LK AYK F G+F ES + F IL AVP+VV +R E N++KELL I REY+TAIR+K A+A+ D VR EL AYFT CNLQPAHLLLAL+ AM S FK KN+ITAASFA RLLELP++SSE++ADL+ KAQKV+ KS++ RNEHTL YDERNPF++DC A P+YRGSP KC YCG YQP +C TCG++ +G ETLGL T
Sbjct: 5 WVNNSSHAADHIAAGSCESAMQLLNRQIAVTNFAPLKSRFLGVYCGALTSVPGLALAPSLQMPLLRTDASDSK----SLPATCVKLPWLIDTLKGAYKAFHAGSFAESLELFKSILYAVPMVVTSSRTESNEVKELLDIAREYITAIRLKLAMADVSDPVRMTELWAYFTHCNLQPAHLLLALKSAMISGFKIKNYITAASFAHRLLELPEVSSEKNADLKGKAQKVILKSEKEGRNEHTLQYDERNPFDIDCQAFVPVYRGSPVVKCAYCGSAYQPECTNKLCTTCGIALIGVETLGLPT 301
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: W7TRK7_9STRA (Coatomer subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK7_9STRA) HSP 1 Score: 360 bits (925), Expect = 1.210e-109 Identity = 201/364 (55.22%), Postives = 253/364 (69.51%), Query Frame = 3
Query: 9 ERGGWGEDDDLDLXXXXXXXXXXXATV-------RGKTAPSDMS-DFAMPP-AGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAE--TQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTS 1067
E GWGED+ LDL + +G D + D +PP AG S W +NSSHAADHAAAG F+ AMQLLNRQIA V F P+R F TG ++LP L + S+R LQRNA DK+P +LP+ + +LP L++ LK AYK F G F E++ +L A+PLVV ++RAE N+LKELL ICREY TAIRIK A+AE + VR +EL AYFT CNLQPAHLLLALR+AM SAFK +N+ITAASFA RLLE+P+++SE++A+LR KAQKVLQKS+QMARNEH ++YD+R F +DC L PI RG+P KC YCG +Y P +KG +CVTCG+S+VG ETLGLVT++
Sbjct: 905 EDSGWGEDE-LDLGELAAPGGKGASGTGQGDECEKGFAVGDDANADIYVPPQAGTSCTAHWCENSSHAADHAAAGSFETAMQLLNRQIAAVEFAPMRPLFTTAFTGAYSSLPCLPLVASLRLPLQRNAQDKDPGTASLPSQANRLPPLIDDLKNAYKAFHAGKFVEAQALLGGLLSAIPLVVVDSRAESNELKELLDICREYKTAIRIKNAIAELSSDQAVRQIELSAYFTHCNLQPAHLLLALRMAMVSAFKFQNYITAASFAHRLLEMPEMASEKNAELRLKAQKVLQKSEQMARNEHAIEYDDRQAFVIDCRTLLPIPRGAPCLKCSYCGSSYTPESKGVLCVTCGISQVGLETLGLVTSA 1267
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A7S2RES0_9STRA (Coatomer subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES0_9STRA) HSP 1 Score: 348 bits (892), Expect = 5.190e-105 Identity = 194/355 (54.65%), Postives = 235/355 (66.20%), Query Frame = 3
Query: 6 EERGGWGEDDDLDLXXXXXXXXXXXATVRGKTAPSDMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAETQ-DVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTS 1067
EE GGW D DLDL G+ D F P AG + WV NSSHAADH AAG F+ AMQLLNRQIA VNFEPL+ F+ V G ++PGL P++ LQR + + TLPAI LKLP++V LK+AYK F G F ES F +++++P+VV TR+E N+++ELL I REY+TAIR+K A+ E D VR+ EL AY T CNLQP+HL LAL+ AM AFK KNFITAASFA+RLLELPD+SSE++A L+ KAQKV+ KS+QMARNEH L YDERNPF++D PIYRGSP +C YC Y P K VC CGLS VG ET+GLVT S
Sbjct: 904 EEGGGW--DVDLDLGEDLDVGPAGKLPSGGRDEGGD-DLFVAPQAGVVPASQWVSNSSHAADHVAAGSFETAMQLLNRQIAAVNFEPLKPKFVGVFCGAATSVPGLALAPALALPLQRTGTS---DAKTLPAICLKLPSIVASLKSAYKAFHSGQFAESLVLFKSVVQSIPMVVTNTRSEANEVRELLEISREYITAIRLKLAIGELSGDPVRSTELWAYMTHCNLQPSHLFLALKFAMGEAFKIKNFITAASFARRLLELPDMSSEKNATLKVKAQKVVLKSEQMARNEHQLHYDERNPFDIDSDTFLPIYRGSPVVRCAYCNAAYSPDMKNKVCRACGLSLVGVETIGLVTAS 1252
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A7S1Z9W7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z9W7_9STRA) HSP 1 Score: 327 bits (839), Expect = 5.430e-104 Identity = 175/321 (54.52%), Postives = 218/321 (67.91%), Query Frame = 3
Query: 108 SDMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAE-TQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTS 1067
SD + F MPPAGR+ WV NSSHAADH AAG A+QLLNRQIA F L+ + + G+ +LPG+ SM L RN + +P ++LP SLK+ LV +++ Y+ F G F +S+ F +L+ +PLV+ E R E N++KE+L ICREY+TAIRIK A++ D VR+ EL AYFT CNLQP HLLLALR AM +AFK KNFI AASFA+RLLELPD++SER+ADLR KA KVLQKS+QMARNEHTL+Y E F +DC PIY + S KC YCG Y + KG VC TC S VG +T+GLVT S
Sbjct: 186 SDDATFDMPPAGRAPAGCWVANSSHAADHVAAGGASSALQLLNRQIAASEFSVLKDTMIGCYLGSTMSLPGVPGSGSMNIPLLRNDAGGHPGSDSLPRTSLKISNLVAGIRSGYRFFQGGKFNDSKNSFTDVLKKIPLVITENRNEANEVKEMLEICREYITAIRIKGAMSGCASDPVRSTELSAYFTHCNLQPIHLLLALRSAMGTAFKHKNFILAASFARRLLELPDMASERNADLRVKATKVLQKSEQMARNEHTLNYKENTTFYIDCKEFVPIYSEAESAKCSYCGSHYSESMKGMVCTTCTFSTVGVQTIGLVTGS 506
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A7S1UZE4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZE4_9STRA) HSP 1 Score: 321 bits (822), Expect = 1.290e-103 Identity = 174/317 (54.89%), Postives = 216/317 (68.14%), Query Frame = 3
Query: 123 FAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAE-TQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTA-KGSVCVTCGLSKVGEETLGLVTTS 1067
F MP AG+ WV NS+HAADH AAG AMQLL+RQIA +F LR + + G+ ++PG+ PSM L RN + P +LP SLK+ LV LK Y+ F G F +S+ F +L +P+VV +++ EGN++KE+L ICREY+TAIRIKAA++E T+D VR+ EL AYFT CNLQP HLLLALR AM +AFK KNFI AA FA+RLLELPD+SSER+ADLR KA KVLQKS+QMARN H L+YDE + F +DC PI G+PS KC YC TY KG VC+TC VG +T+GLVT S
Sbjct: 29 FEMPTAGKPAVGCWVANSAHAADHIAAGGASSAMQLLHRQIAASDFGVLRSTMIGTYVGSMLSVPGVPGSPSMNVPLLRNDASGPPGVQSLPRTSLKVVHLVAGLKNGYRFFMGGKFNDSKNAFQDVLNKIPMVVTDSKNEGNEMKEMLEICREYITAIRIKAAMSENTKDPVRSTELSAYFTHCNLQPIHLLLALRSAMGTAFKHKNFIAAAGFARRLLELPDMSSERNADLRVKATKVLQKSEQMARNVHELNYDESSSFTIDCRDFVPIVAGTPSVKCSYCESTYADAGMKGKVCLTCTFCAVGTQTIGLVTGS 345
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A7S3GXR2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXR2_9STRA) HSP 1 Score: 325 bits (832), Expect = 5.250e-103 Identity = 172/330 (52.12%), Postives = 226/330 (68.48%), Query Frame = 3
Query: 99 TAPSDMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNP---EKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAV--AETQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVTTSST 1073
T +D S F +P AG W+ +S+H ADH AAG A+QLLNRQ+A V+ PLR ++ G+ A LPG + PS R++L R+ P LP+++LK+ L+E+LK AY+ FT F E + D ILR++ L+ TR E N LKELL + REY+ A+R+K A+ A DV R +EL AYFT CNLQP+HL+LAL+ AMASAFK KNFI AASFA+RLLELPD++SE++AD R+KAQKVLQKS+Q RNE+T+DYDERNPF +DC LKP+Y+G+P KC YC Y KG +C+ CG+S VG +T+GLVT S+T
Sbjct: 168 TRNADGSIFTVPNAGNPPTLSWIADSAHCADHFAAGSADTAVQLLNRQVAAVSVAPLRAGATSLFLGSSAFLPGFSLAPSNRSYLVRDTGKAAPGAAAAKPLPSLTLKVTALLEQLKLAYRAFTNAQFTECQDSLDSILRSILLISVSTRTETNDLKELLDVSREYLIALRVKNAMGDASAADVGRGLELAAYFTHCNLQPSHLMLALKTAMASAFKNKNFINAASFARRLLELPDMNSEKNADSRSKAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLVTQSAT 497
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Match: A0A7S1FWB5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWB5_9STRA) HSP 1 Score: 320 bits (819), Expect = 1.270e-100 Identity = 170/317 (53.63%), Postives = 220/317 (69.40%), Query Frame = 3
Query: 111 DMSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEPLRGHFLAVHTGTQAALPGLNAMPSMRTWLQRNASDKNPEKNTLPAISLKLPTLVERLKAAYKTFTVGNFGESRQEFDFILRAVPLVVGETRAEGNQLKELLSICREYVTAIRIKAAVAETQDVVRNMELLAYFTCCNLQPAHLLLALRLAMASAFKGKNFITAASFAQRLLELPDLSSERHADLRAKAQKVLQKSQQMARNEHTLDYDERNPFEVDCLALKPIYRGSPSCKCPYCGCTYQPTAKGSVCVTCGLSKVGEETLGLVT 1061
D S AMP AG++ +WV NSSHAADHAAAG + AMQLL+RQ+A+ ++ PL+ + + G Q ++P S+ + RN + P K +LP LK+ L LK +++ F G F ++ F I++ +PL V + R EG ++KE+L ICREY+TA+RIK A+ ET+D VR+ EL AYFT CNLQP+HLLLALR AM ++FK KNFI AASFA+RLLELPD++S R+A LR KA KVLQKS+QMARNE+ L+YD PF VDC +L P+Y KC YCG TY KGSVC+TC LSKVGE+TLGLVT
Sbjct: 220 DNSGCAMPKAGQTASAVWVSNSSHAADHAAAGSMETAMQLLHRQVAIAHYVPLKSYMVGAFLGAQVSIPFTGGSCSLPLF--RNDASGFPGKESLPLKGLKMRLLELSLKESFRAFQGGKFTDAMNGFMEIIQKIPLTVTDGRNEGMEVKEMLEICREYITALRIKIAIGETEDPVRSTELSAYFTHCNLQPSHLLLALRSAMVTSFKHKNFIVAASFARRLLELPDVNSARNAQLRVKATKVLQKSEQMARNENELNYDAGAPFVVDCASLVPLYPSDAIVKCSYCGSTYGKEWKGSVCLTCQLSKVGEQTLGLVT 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4521.11367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4521.11367.1 >prot_H-paniculata_contig4521.11367.1 ID=prot_H-paniculata_contig4521.11367.1|Name=mRNA_H-paniculata_contig4521.11367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp MSDFAMPPAGRSLPTMWVDNSSHAADHAAAGDFQGAMQLLNRQIAVVNFEback to top mRNA from alignment at H-paniculata_contig4521:8747..14267- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4521.11367.1 ID=mRNA_H-paniculata_contig4521.11367.1|Name=mRNA_H-paniculata_contig4521.11367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5521bp|location=Sequence derived from alignment at H-paniculata_contig4521:8747..14267- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4521:8747..14267- >mRNA_H-paniculata_contig4521.11367.1 ID=mRNA_H-paniculata_contig4521.11367.1|Name=mRNA_H-paniculata_contig4521.11367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig4521:8747..14267- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |