prot_H-paniculata_contig4520.11364.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4520.11364.1
Unique Name	prot_H-paniculata_contig4520.11364.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	230

Homology

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BLAST of mRNA_H-paniculata_contig4520.11364.1 vs. uniprot
Match: A0A6H5JRQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ9_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 2.650e-34
Identity = 109/235 (46.38%), Postives = 149/235 (63.40%), Query Frame = 0

Query:    2 QDALPVQVLSLKARLKGALESIGCEGQTAGR------ALERVTREHISLGEGLGAVEKELVMARKEAARSAVDSLRLVQEKRARAEARRVRHFEQLGEAKRAAAVARAEAKAERENRAEAMTECRNTKELLEAARSSCSVTEEVSKTLRRDMETLKASGEVEKLRKALTETETLLDQERARFDAAKREGAEELQLCERKRELEVFAANEAAAVLERVAKLQLERLPEHQQQLLQA 230
            + +LPVQVL+LKARL G L   G +G  +G       AL  V REH +L E LG +E+EL+ AR++  + A   L+  Q+KRARAEARRVRHFEQLGEA+RAAAVA+AEA+A R   A+  TE ++ +++LE ARS+ S  ++ +   +++    +A G   KL +     ++ L +       A R   +  +LCERKRELEV AA   A   ER A+ Q++RLPEHQQQLLQA
Sbjct:  181 EPSLPVQVLTLKARLDGLLLG-GHDGVDSGHQKTVTEALTSVKREHAALRECLGDIERELLTARRKVEQDAASRLQAAQQKRARAEARRVRHFEQLGEARRAAAVAKAEAEALRARLADGATELQHMRDMLETARSAASAAQDRADQCQKEAAVAEA-GFCSKLSRT---HDSRLCKSALLRSLAFRLPLDGAKLCERKRELEVDAATRVAEARERAAEEQMKRLPEHQQQLLQA 410

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BLAST of mRNA_H-paniculata_contig4520.11364.1 vs. uniprot
Match: D8LEG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG2_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 3.810e-34
Identity = 107/233 (45.92%), Postives = 137/233 (58.80%), Query Frame = 0

Query:    4 ALPVQVLSLKARLKGALESIGCEGQTAGR------ALERVTREHISLGEGLGAVEKELVMARKEAARSAVDSLRLVQEKRARAEARRVRHFEQLGEAKRAAAVARAEAKAERENRAEAMTECRNTKELLEAARSSCSVTEEVSKTLRRDMETLKASGEVEKLRKALTETETLLDQERARFDAAKREGAEELQLCERKRELEVFAANEAAAVLERVAKLQLERLPEHQQQLLQA 230
            +LPVQVL+LKARL G L + G +G  +G       AL  VTREH +L E LG VE+EL+ AR++  + A   L+  Q+KRARAEARRVRHFEQLGEA++ A VA+ EA+A R   A+  TE R+ +++LE ARS+ S  ++                                     R D  ++E A   +LCERKRELEV AA  AA   ER A+ QL+RLPEHQQQLLQA
Sbjct:   37 SLPVQVLTLKARLDGLLRA-GHDGVDSGHHLTVTEALTSVTREHAALRECLGDVERELLTARRKVEQDAASRLQAAQQKRARAEARRVRHFEQLGEARKTAVVAKTEAEALRARVADGATELRHARDMLETARSAASAAQD-------------------------------------RADQCQKE-ATVAELCERKRELEVDAATRAAEARERAAEEQLKRLPEHQQQLLQA 230

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4520.11364.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4520.11364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JRQ9_9PHAE	2.650e-34	46.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LEG2_ECTSI	3.810e-34	45.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..118
None	No IPR available	COILS	Coil	Coil	coord: 156..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4520	contig	H-paniculata_contig4520:504..3267 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4520.11364.1	mRNA_H-paniculata_contig4520.11364.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4520 504..3267 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4520.11364.1 ID=prot_H-paniculata_contig4520.11364.1|Name=mRNA_H-paniculata_contig4520.11364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
TQDALPVQVLSLKARLKGALESIGCEGQTAGRALERVTREHISLGEGLGA
VEKELVMARKEAARSAVDSLRLVQEKRARAEARRVRHFEQLGEAKRAAAV
ARAEAKAERENRAEAMTECRNTKELLEAARSSCSVTEEVSKTLRRDMETL
KASGEVEKLRKALTETETLLDQERARFDAAKREGAEELQLCERKRELEVF
AANEAAAVLERVAKLQLERLPEHQQQLLQA