prot_H-paniculata_contig4514.11356.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4514.11356.1
Unique Nameprot_H-paniculata_contig4514.11356.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length345
Homology
BLAST of mRNA_H-paniculata_contig4514.11356.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.130e-6
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:   13 MVDVRT-KTCSHEGCAKEPSYGSAGTRKAEFCARHAKDGM 51
            MVD+   + C+HE C K P+YG  GTRKAEFCA HA DGM
Sbjct:    8 MVDIHNIRRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGM 47          
BLAST of mRNA_H-paniculata_contig4514.11356.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.020e-5
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   13 MVDVRTKTCSHEGCAKEPSYGSAGTRKAEFCARHAKDGM 51
            M+ VR KTC H GC    ++G  G++KAEFC+RHA+DGM
Sbjct:    1 MIHVRAKTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGM 39          
BLAST of mRNA_H-paniculata_contig4514.11356.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.080e-5
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0
Query:   13 MVDVRTKTCSHEGCAKEPSYGSAGTRKAEFCARHAKDGM 51
            MVDV  + C H GC K PS+G  G++K EFCA+HA  GM
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39          
BLAST of mRNA_H-paniculata_contig4514.11356.1 vs. uniprot
Match: A0A6H5JW94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW94_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 5.150e-5
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0
Query:   13 MVDVRTKTCSHEGCAKEPSYGSAGTRKAEFCARHAKDGM 51
            M +V  K C H GC K+PS+G+AG+++AEFC  HAK  M
Sbjct:    1 MFNVVDKRCGHPGCTKKPSFGTAGSKRAEFCCPHAKQDM 39          
BLAST of mRNA_H-paniculata_contig4514.11356.1 vs. uniprot
Match: D8LNJ8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ8_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 5.800e-5
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   13 MVDVRTKTCSHEGCAKEPSYGSAGTRKAEFCARHAKDGM 51
            M+DV +K C+H GC K PSYG   ++KAEFCA HA+ GM
Sbjct:    1 MIDVVSKRCAHSGCNKWPSYGMPPSKKAEFCANHARPGM 39          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4514.11356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5LBM3_9PHAE1.130e-662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCH9_ECTSI1.020e-556.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB1_ECTSI1.080e-556.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JW94_9PHAE5.150e-553.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNJ8_ECTSI5.800e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4514contigH-paniculata_contig4514:12431..13465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4514.11356.1mRNA_H-paniculata_contig4514.11356.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4514 1581..13465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4514.11356.1 ID=prot_H-paniculata_contig4514.11356.1|Name=mRNA_H-paniculata_contig4514.11356.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp
MVCRFLVVEETVMVDVRTKTCSHEGCAKEPSYGSAGTRKAEFCARHAKDG
MVNVWSKTCSHEGCSSRPSYGSAGTRQAEFCARHAADGMVAVRNKTCFHE
GCSTRPSYGSAGTRKAEFCAGHAEPGMVNVQNKTCSHEGCTKESSYGSVG
TRKAEFCARHVKDGMVNVRTKTCSHEGCSSRPYYGSAGTRQVEFCARHAA
DGMIVMRNKTCSYGGCSTRPSYGSAGTRKAEFCARHAADGMVAMRGKTCS
HEGCSTRPSYGSAGTKKAEFCARHAEAGMVNVQNKMCSHEGCAKESSYGS
AGTRKAEFCARHAKGGMVNVRSKTCSHEGCSIRPSYGSAGTRKAE
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