prot_H-paniculata_contig4513.11354.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4513.11354.1
Unique Nameprot_H-paniculata_contig4513.11354.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 4.960e-112
Identity = 161/170 (94.71%), Postives = 168/170 (98.82%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170
            MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPE+ETRSSKELLLNPVTICRNE E+CLIETSVNSVRVSIAVKQADEIETILC +F+SFLMQRAEQFVVMRRKPAEG+DISFLVTH+HLEK+WKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ
Sbjct:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFVQ 170          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 283 bits (725), Expect = 7.160e-96
Identity = 133/168 (79.17%), Postives = 154/168 (91.67%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTLRPYL  IR TLDA+LCLRNFPSQTVERHNKPE+E +SSKELLLNP+TICRNE ERCL+E+S+NSVRVSI VKQADEIE+ILC++F+ FLMQR+EQF+VMRRK A GYDISFL+TH HLE MWKHKL+DF+I+FMEDIDKEISGMKIAINAR RI+A +++ QF
Sbjct:    1 MANTLRPYLTTIRHTLDASLCLRNFPSQTVERHNKPEVEVQSSKELLLNPITICRNEQERCLVESSINSVRVSIGVKQADEIESILCRKFTRFLMQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQF 168          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 270 bits (689), Expect = 2.120e-90
Identity = 125/168 (74.40%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPE+E R SKEL+L P+ ICRNE+E+C IE S+NS RVSI +KQADEIE+ILC +FS FLMQRAEQF+++RRKP EGYD+SFL+TH+HLE ++KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    1 MANTLAPYLNAIRATLDGALCLQNFPSQVVERHNKPEVEVRMSKELILTPIVICRNENEKCCIEPSINSARVSICIKQADEIESILCHKFSRFLMQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.850e-90
Identity = 129/168 (76.79%), Postives = 146/168 (86.90%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPE+E   S+ELLLNPV ICRNE+ERC IE S+NS RVSI +KQADEIETILC +FS FLMQRAEQF++MRRKP EGY ISFL+ HTHLE ++KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:   50 MANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 269 bits (688), Expect = 3.010e-90
Identity = 129/168 (76.79%), Postives = 148/168 (88.10%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYL AIR +LDAALCLRNFPSQ VERHNKPE+E R SKELLLNP+ I RNE+E+CLIE S+NS RVSI +KQADEIETILC +F+ FLMQRAEQF++MRR P EGY +SFL+THTHLE ++KHKLIDFIIQFMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    1 MANTLAPYLTAIRNSLDAALCLRNFPSQVVERHNKPEVELRLSKELLLNPILIARNENEKCLIEPSINSTRVSICIKQADEIETILCHKFTRFLMQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: W4GJL2_9STRA (Actin-related protein 2/3 complex subunit 4 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJL2_9STRA)

HSP 1 Score: 269 bits (687), Expect = 4.420e-90
Identity = 129/168 (76.79%), Postives = 147/168 (87.50%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MANTL PYLNAIR TLDAALCL+NFPSQ VERHNKPEIE   S+ELLLNPV ICRNE+E+C IE S+NS RVSI++KQADEIETILC +FS FLMQRAEQF++MRRK  EGY ISFL+ HTHLE ++KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:    1 MANTLAPYLNAIRSTLDAALCLQNFPSQVVERHNKPEIEVGLSRELLLNPVVICRNENEKCCIEPSINSTRVSISIKQADEIETILCHKFSRFLMQRAEQFIIMRRKAIEGYSISFLIIHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 266 bits (681), Expect = 3.390e-89
Identity = 129/167 (77.25%), Postives = 146/167 (87.43%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYL AIR +LD+ALCLRNFPSQ VERHNKPE+E R SKELLLNP+ ICRNE E+CLIE SVNS RVSI +KQADEIETILC +F+ FLMQRA+QF++MRR P EGYD+SFLV HTHLE M+KHKLIDFII FMEDIDKEIS MKI++NARGRI+A +FM QF
Sbjct:    1 ANTLAPYLTAIRHSLDSALCLRNFPSQVVERHNKPEVELRLSKELLLNPILICRNETEKCLIEPSVNSTRVSICIKQADEIETILCHKFNRFLMQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A3R6WI01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WI01_9STRA)

HSP 1 Score: 269 bits (688), Expect = 9.590e-89
Identity = 128/167 (76.65%), Postives = 145/167 (86.83%), Query Frame = 0
Query:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            ANTL PYLNAIR TLD ALCL+NFPSQ VERHNKPE+E   S+ELLLNPV ICRNE+ERC IE S+NS RVSI +KQADEIETILC +FS FLMQRAEQF++MRRKP EGY ISFL+ HTHLE ++KHKL+DFIIQFMEDIDKEIS MKI +NARGR++A +FM QF
Sbjct:  104 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 270          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A7S2BQQ1_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQQ1_9STRA)

HSP 1 Score: 266 bits (679), Expect = 9.930e-89
Identity = 125/168 (74.40%), Postives = 147/168 (87.50%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
            MA TLRPYLN IR TLDAALCLRNFPSQ VERHNKPEIE + +KELLLNP+TICR + ERCLIE SVNSVR+SI +KQADEIE +LC +F+ FLMQRA+QF++MRRK  EGY ISFLVTH HLEKMWK+KLIDFII FMEDID+EIS MK+A+NAR R++A++F+ +F
Sbjct:   11 MAATLRPYLNCIRSTLDAALCLRNFPSQIVERHNKPEIEIKGNKELLLNPITICRTKTERCLIEPSVNSVRISIQIKQADEIEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKNKLIDFIISFMEDIDREISAMKLAVNARARVVAKEFLKEF 178          
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 263 bits (672), Expect = 8.520e-88
Identity = 123/169 (72.78%), Postives = 147/169 (86.98%), Query Frame = 0
Query:    1 MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNPVTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQFVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQFV 169
            MA+TL+PYL  +R TL+A LCLRNFPSQTVERHNKPE+E R SKELLLNP+TICR + ERCLIE SVNSVR+SI +KQADE+E +LC +F+ FLMQRA+QF++MRRK  EGY ISFLVTH HLEKMWK KLIDF+IQFMEDIDKEIS MK+A+N+R R +AQ+F+ +FV
Sbjct:    1 MASTLKPYLACVRTTLNAGLCLRNFPSQTVERHNKPEVEVRGSKELLLNPLTICRTDKERCLIEPSVNSVRISIQIKQADELEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREFV 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4513.11354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ4_ECTSI4.960e-11294.71Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A836CIE5_9STRA7.160e-9679.17Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A067C4Y9_SAPPC2.120e-9074.40Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
A0A024TP77_9STRA2.850e-9076.79Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4BNX3_PYTIN3.010e-9076.79Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
W4GJL2_9STRA4.420e-9076.79Actin-related protein 2/3 complex subunit 4 n=5 Ta... [more]
K3WN29_GLOUD3.390e-8977.25Actin-related protein 2/3 complex subunit 4 n=27 T... [more]
A0A3R6WI01_9STRA9.590e-8976.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2BQQ1_9STRA9.930e-8974.40Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A7S2CG59_9STRA8.520e-8872.78Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PIRSFPIRSF039100ARPC4coord: 1..170
e-value: 4.5E-84
score: 278.2
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 1..165
e-value: 3.5E-80
score: 267.5
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 1..169
IPR034666Arp2/3 complex subunit 2/4GENE3D3.30.1460.20coord: 1..168
e-value: 5.0E-81
score: 272.1
IPR034666Arp2/3 complex subunit 2/4SUPERFAMILY69645Arp2/3 complex subunitscoord: 3..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4513contigH-paniculata_contig4513:4444..6848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4513.11354.1mRNA_H-paniculata_contig4513.11354.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4513 4378..7067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4513.11354.1 ID=prot_H-paniculata_contig4513.11354.1|Name=mRNA_H-paniculata_contig4513.11354.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
MANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEIETRSSKELLLNP
VTICRNEHERCLIETSVNSVRVSIAVKQADEIETILCKRFSSFLMQRAEQ
FVVMRRKPAEGYDISFLVTHTHLEKMWKHKLIDFIIQFMEDIDKEISGMK
IAINARGRIIAQQFMLQFVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008384ARPC4
IPR034666ARPC2/4