mRNA_H-paniculata_contig4510.11350.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4510.11350.1
Unique NamemRNA_H-paniculata_contig4510.11350.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4510.11350.1 vs. uniprot
Match: D7FIJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ8_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.370e-7
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 2 
Query:  125 KIVNFGYHHSKIMLLKYRTGLRVVVITANLTPNCRQGKSQMVWYQDFSRKKP 280
            K ++ G HHSK++LLKY+TG+RVV++T N+ P+   G+ Q  WYQDF  K P
Sbjct:  267 KTIHIGLHHSKMILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPP 318
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BLAST of mRNA_H-paniculata_contig4510.11350.1 vs. uniprot
Match: A0A5J4TRY7_9EUKA (Putative Tyrosyl-DNA phosphodiesterase 1 n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4TRY7_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 1.080e-5
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 2 
Query:  131 VNFGYHHSKIMLLKYRTGLRVVVITANLTPNCRQGKSQMVWYQDF 265
            V +G  HSKIMLLKY TGLRVVV +ANL  +  + K+Q +W QDF
Sbjct:  103 VQYGTFHSKIMLLKYPTGLRVVVTSANLVHSDWESKTQAIWCQDF 147
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BLAST of mRNA_H-paniculata_contig4510.11350.1 vs. uniprot
Match: F0W1W9_9STRA (TyrosylDNA phosphodiesterase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1W9_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.300e-5
Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 2 
Query:   41 SVTMSELIAGDFTSTLLSTFLFD----------ALFLF---------KIVN-----------FGYHHSKIMLLKYRTGLRVVVITANLTPNCRQGKSQMVWYQDFSRK 274
            S+ +++L+ G+FTS LLS +++D          ++FLF         K  N           FG HHSK+M++ Y   +RV + TAN  P     K+Q +W+QDF  K
Sbjct:   76 SIALTDLLDGEFTSCLLSNYMYDVPWLMQQYFVSIFLFWQSIKHQCQKYTNIKTIAPYLPIPFGTHHSKMMIIWYAEKVRVAIFTANFLPIDWNNKTQGIWFQDFGLK 183
[Close]
BLAST of mRNA_H-paniculata_contig4510.11350.1 vs. uniprot
Match: A0A5J4WI50_9EUKA (Putative tyrosyl-DNA phosphodiesterase 1 n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WI50_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 3.970e-5
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 2 
Query:  131 VNFGYHHSKIMLLKYRTGLRVVVITANLTPNCRQGKSQMVWYQDF 265
            V +G  HSKIMLLKY TGLRVVV +ANL  +  + K+Q +W QDF
Sbjct:  103 VQYGTFHSKIMLLKYPTGLRVVVTSANLVHSDWESKTQAIWCQDF 147
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4510.11350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIJ8_ECTSI1.370e-751.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5J4TRY7_9EUKA1.080e-560.00Putative Tyrosyl-DNA phosphodiesterase 1 n=1 Tax=S... [more]
F0W1W9_9STRA2.300e-533.33TyrosylDNA phosphodiesterase putative n=1 Tax=Albu... [more]
A0A5J4WI50_9EUKA3.970e-560.00Putative tyrosyl-DNA phosphodiesterase 1 n=1 Tax=S... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4510contigH-paniculata_contig4510:1866..13429 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score63.5
Seed ortholog evalue1.1e-07
Seed eggNOG ortholog2880.D7FIJ8
Preferred nameTDBP1
KEGG koko:K10862
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3'-tyrosyl-DNA phosphodiesterase activity
EggNOG OGsKOG2031@1,KOG2031@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons4
Model size756
Cds size504
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4510.11350.1prot_H-paniculata_contig4510.11350.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4510 1915..13226 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930354.4410324-UTR-H-paniculata_contig4510:1865..19141622930354.4410324-UTR-H-paniculata_contig4510:1865..1914Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4510 1866..1914 +
1691481254.714032-UTR-H-paniculata_contig4510:1865..19141691481254.714032-UTR-H-paniculata_contig4510:1865..1914Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4510 1866..1914 +
1622930354.531656-UTR-H-paniculata_contig4510:13226..134291622930354.531656-UTR-H-paniculata_contig4510:13226..13429Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4510 13227..13429 +
1691481254.7684314-UTR-H-paniculata_contig4510:13226..134291691481254.7684314-UTR-H-paniculata_contig4510:13226..13429Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4510 13227..13429 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930354.4645832-CDS-H-paniculata_contig4510:1914..19921622930354.4645832-CDS-H-paniculata_contig4510:1914..1992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 1915..1992 +
1691481254.7294729-CDS-H-paniculata_contig4510:1914..19921691481254.7294729-CDS-H-paniculata_contig4510:1914..1992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 1915..1992 +
1622930354.483575-CDS-H-paniculata_contig4510:3980..41811622930354.483575-CDS-H-paniculata_contig4510:3980..4181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 3981..4181 +
1691481254.7379348-CDS-H-paniculata_contig4510:3980..41811691481254.7379348-CDS-H-paniculata_contig4510:3980..4181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 3981..4181 +
1622930354.4998884-CDS-H-paniculata_contig4510:6877..70191622930354.4998884-CDS-H-paniculata_contig4510:6877..7019Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 6878..7019 +
1691481254.7489145-CDS-H-paniculata_contig4510:6877..70191691481254.7489145-CDS-H-paniculata_contig4510:6877..7019Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 6878..7019 +
1622930354.5181334-CDS-H-paniculata_contig4510:13143..132261622930354.5181334-CDS-H-paniculata_contig4510:13143..13226Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 13144..13226 +
1691481254.7594059-CDS-H-paniculata_contig4510:13143..132261691481254.7594059-CDS-H-paniculata_contig4510:13143..13226Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4510 13144..13226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4510.11350.1

>prot_H-paniculata_contig4510.11350.1 ID=prot_H-paniculata_contig4510.11350.1|Name=mRNA_H-paniculata_contig4510.11350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MSELIAGDFTSTLLSTFLFDALFLFKIVNFGYHHSKIMLLKYRTGLRVVV
ITANLTPNCRQGKSQMVWYQDFSRKKPYEDDKREERDKFNGYAETEQEEA
DAAETAKPIEEAQAAGAAAKELADSAAIAKNKKHKKDSKEVDMAERDDGI
LLGLQTIPRGSPRRRGG*
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mRNA from alignment at H-paniculata_contig4510:1866..13429+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4510.11350.1 ID=mRNA_H-paniculata_contig4510.11350.1|Name=mRNA_H-paniculata_contig4510.11350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11564bp|location=Sequence derived from alignment at H-paniculata_contig4510:1866..13429+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCTCGTGCACACACTCGGGGACCCGACCCCGCCTCGGCAAGCGTCACCA
TGTCGGAGCTTATCGCGGGCGACTTCACGTCAACGCTGCTGAGCACGTTC
CTCTTCGATGCGCTGTTTCTGTTTAAGGTGTGTCCCCGACTTGCAAACAT
GCCGCTAGTGCTGTGCCACGGCATGAAGGCGGGCAAGTGAGTGGAGAGTT
TGCCGTGTGTAGGGTTGTAGAAAGTAGGCAAGCAGGAAGGAGGGGTAGAT
GGCGTTGTAATGCCGCGTGGTTCACCCTCTCTCTTCGCTGCCAAGGAATT
TTTCACTTAACCGACGAGATCGTTTTTGCGGTACACGCAGCCGGAATTAG
AACCCGTTCGCGGATCGGATCCACTCGGATCCACTCGGTTCGGATCTATT
CGGTTCGGCCTGGTGATTTGAAGAAATGTGTATATTATACATGTATGTAT
ATACAAGCCCTTCCCGGGCGGCGCCGGCCCTCATGGCTTTTCCTCGCAAA
CCGGAGACGTTAGGACGTGTCAAGGTTTGCATGCAGGTCAGCTGAAGAAC
CCATTTTTGAAACGTTGGGTGTTTTCCTACTTTTTTTCCATTTTTCTTGT
CTATTCTTCTATATTGTTTTCTCGAAGGTTTTTGAAAGTTCGAAATAAGA
AATGTGTAGTTTTGTCCTATAGCAATTCCGATTATTCCAATAGTGTCGTT
TGGAGCGGCCCTGAACCAATGGTTCGTGCAGTGTAGCATATTATGTATAC
AATGCAATTTGATGCCTCTATACTAGAGCAGCCGCAGTGCCCCCCCCTAA
CGACTGTTTTGTCTTTTCAAACACGGAACCTACAGTTTCTGATGTTTAAA
CTGCGGCCCGTATTTCCGACCAGCGTTATGTTTCGCCGCTTCTGCAGTGC
TCATTTTAGCGTTTGATATAAAGAGATCATCGGGTGTCTCAAAGCATAGA
CATGCTGTAAATATTCTCTAGAAAACGAAAGCCACCCCTCGGTTGAGTCA
GTCGTGCGAGTGTTTTTGACAAGGGTTTGTTATTTTCACCATATTGATCA
ATCGTAGAGACGGCAAGTTGAGTTTTATTTGTATGAGATGGAAAAAAATA
TATATATCGTAAATTTGCGAAGAGCATGTTATTGAGGTTACTCGGGTTCT
TGAGGTTTCTGGACCCCGATCCCCTCCGCAACATCCAGCTGGTATTCCAT
CGCTCTGGCAGTTGTCAGACGTGGACGCCTCATCAGAATCAGAAGTGATC
ATTGATTCACCACTACTGTTTCCTTTTCTGTGATTGGCTCGAGAGTTTTG
GATGAACTCGTATTTGCGCAAAACAATTTTCACGTACGTTTCAGATATGT
TTTTAATATGCCGCCCTTTACTATATTTCTACCCCCCCCCCCCTGGTTTG
TTTCGTGTGTATGTCATAATCCAGGCTAGAGACGACGAAGATGAACGACC
ACATGTCCCTGTTACACCCCCGAGCACAATTTCACATCCCAACGATACGC
ATGGGTACATGTGGCGGCATGTCGGCACGACTAGTCATCTGTAGCATGTC
CTTATTATCATCCCTTGCTTTTTTATGTAAAACGTTTACAGCATATTAAC
CCCTGCCTGTAGCCGTTAAGTAATGATGACTGAAATGAATAGCAAGGTGC
AAATGCTCTGCCATCACGAGTCAAACGTGGAGTTTTCAGGGCAATTTGAT
GTTTGATTTGAATATATATGGCTTGATTCATGTCACGAACTTGTGTGCCC
TCTAGTGTACCTGTGCCTTAAAGCTGGCCACCGACTGTATAGAAGGTTTA
GTATCCCCCTCCTCATGCCTAGGTACTTAAGGCAGGTGAAACGTTTTTGA
GCCACATTTGGCAACGTAGGAATGAGCGGTTGGGCATCGGAAATCGATTT
TAAAAGGGACAACGTTCCGTCGTCCCGAAGTCGCGTGATGAATGGTGGAA
AAACTATATGCAAAACATGAGTAACCCCCCCCCCCCCCCTCCTCCCCCAT
GCCTCCGTCTTCTCGAGGACGCGTGGTCAACGTTCTACCAATCATAGCAT
GCAAAATTATGAGCATGCCAATCCCCCCGCCCCCTACCACCCCATGGCTT
TTGTATGTAATGCAGATCGTCAACTTCGGCTACCACCACTCAAAGATCAT
GTTGCTCAAGTACCGCACCGGGCTGAGGGTCGTGGTCATAACGGCCAACC
TCACCCCTAACTGTCGGCAAGGGAAGTCGCAAATGGTATGGTACCAAGAC
TTCTCCAGGAAAAAGCCGTACGAAGATGATAAGAGAGAGGAACGCGATAA
GTTCAACGGCTATGCGGTATGTTGATGGGGAGGAACGGGGTGGGGTGGGG
TACGGGGGGGGGCGCTTCAATTTAAGATATTCACACGTATCAGCAAAACT
AGATCAATAAGGAAAAACTTATGTTTCGTCCATCCGCATTTTAAAGCATG
GACAAGAGCAAGAACCCTCCACGATGGCCATCCGCTATTTTATTCACTGT
GTGCACACCTGTGAGATGTTCGTTATACAAGCGTACAACTGTGTAGGTGA
TGGCTGTGCTCTGTTTATGATGTCTTAACAAAACGAAACAAGAGGTATTG
CTCAAGGAACTTATACTGTTGAGTGATAACGATGATGTTGATGATGGTTG
ATTTCACGAACAAACCAACCAAATTATCGAGGGGGTTGGGTGTACAAGTA
CTCGTGAAAACGCATGCTGCTGTCTCTTGACCGTTAACCTCGAGTCCCTT
TAATGCTGGGACGGAGGATATCGGGTTCTCACCACCCAAGCTGGGTTTTA
TAACGGGGATAGTAACCATTAGTCATATTCCTTTCGTTGTTACCCCAACC
GGAGTCTGCCTTGGGGTTTTGGGTATCTCGGGTTACCAAAAGTTGCACAT
GCTGCATGCGTGCGACTGGACCCCCAGCACCGCACGGAACTTTAATATCA
TGTCCATGTATAAATGACGTTGCGCCGCACATAGCGAACGCATCGCTTTG
TGTGTGATGCACTTGGGGTATAATCTGCTGTTGTATATCCCTGATGGAGT
ATGACCATAAGTGTTTCTACGCCAAGGTATTACAACTACCAATTCAGCAG
AGATCCTGCAGAGTGTGACCTTTTCTACCGAGGGCAACAAACTCCCAAGA
TATATCCCGCATGACCTCCCCTATACCCCTAAGTTCGTTCTCCTTAGGAC
GCGTGGTCAATGGTCTAACATCGGCGAAATACTAAACATGAGTACGCCCA
TGCCCCGTTTTTTTTTGCCCACGTTCAATTTAAATACACGACCCACTTAA
CTAACCAAATGTTTTGTTGAAAGTGGCTGATACCGCACTGGATTATGACT
GACGATAATAACAGTAAGGCTGGTGGAACTGCACTGCATCCCACGACTGA
CTTTATTGCACTGTACTGTACGACCGAAATCGTTGACGACGATAGCCCTA
TAAAACTGTGCTGTATTGTACCACCTAAATCGTTGACGATGATAGCACTA
TAAAACTGCGCAGTACTGGATAGATAGATGAATGTAATAGTGGCCTAGAC
ACAGTGTAGTGTGCTACGCATATCGATGAATGTACTGAAGTGCTGACCAC
ACCAATTTGCATACCTTTTCAACATCTCTCAACTATTTAATAGACCACCA
ACACGTGAAAACATGAAAAAAGAATGACTCAACAAGGAGTCAACAAGGCC
CCAAACACCTTACAAGTCTACGCCTTATAACCCAACAGAAAACTCGGACA
GGTAAAATATGCATGTATTGTCCAAGATTTGAATGACCTTGAGGCTGAAA
ACAAGACTGCGAAGTGAGCTTGCGACGCTACGCTGAAGAGCCAGATGTTG
ACGGTTGCGGCGGTTTTTACGTTTCTTTTTTAACATTAGCAAATTTTACA
GTTCCACGCCACAAGAGCCAACCGCGACGACCGCACCGCGACGACCGCGG
AGGGGAGTGGGAGAGGGGAGGAGTAAGATAACGTGGCTTTCATGTGAACG
CAGGAGACAGAAATAAAGCACCCCATTCACCCATTGCAAGCCTTCTTGAC
AACCCAGATCATGTGCCATACTTGGTAGCTTTATAAATCTCATAGGATAA
CTCAATCATGCCCCTGTTGAGGTTGTGCAGCTGCCCTTAAATCTGGGTTG
TGTACAGTCATCAGCAAAATAAGATTGCACCCGGACAAATTTCACAACAT
GAAAATGTGTTTTCATGCTAAGGTGGTCGAAAATCGTTCTGATAGGAACA
ACAGCTCCGTTCTCCCTCATCCTCCCAAAAACGAGCGCTCAAATGTCTAA
CAGCATCGGCATGAAAAACATTAGTACGCTCCCCCACACACCACCTCTAA
ACATGAACCAACCTCTTTTGATAGCCAGCTGCTCCAAAATCCTGGCATTC
GGAAATCATCGAACGGGGGAGGTGTATACTGGGCGGCTTACATGTGCATA
TTTAGGTCATGTTTCGGCTGCCCTGAAACAATACTCGTCGTCTTTCTGGA
ACAGTTTTTCAATTCTATACTTGAGTAATTAGTTAACAAATCTGACCGGG
CAATGTGCTTGCCTTGATTTTTTTGTCATACTCGAATCGCGTTTTCAATA
GCGCGAAATACATGTAGCAGACGGGTGGTATTAATAGAGTCGTTCTTCGA
TAGGGTAAGGGGGGGGGTCAATTGTGGAACATGATACTATTCCAATAATG
GCTACATACTCCACACACGCTTGACCGGGTTTTTCCTTCTGTGCGTATGT
GAGTGTGTGTGTGTGTGAGTGCGCCTCACAGGGTTTATTGTACATCATCC
GCAGAGCAGCGAACCGCTTTATGCTCGCTTTTGCGAAGACTCGTCTTCAA
TCTCCGAAGAAAAGCGTAGCAATTCTAAAGCTAGACTTGTAACGTAGCAG
CCCCAGAGGACTCAACACTACCCCTGTATCTACAAGGATAATCGGGAGCA
CTCATGCCCTATCGTAGGCCGAGACACTAATGCTAACTATATATATTTCC
TCGTCCTGGCAGGAAACGGAGCAGGAAGAGGCAGATGCAGCCGAGACGGC
GAAGCCGATCGAAGAAGCGCAGGCGGCGGGAGCGGCGGCGAAGGAGCTAG
CAGATTCCGCGGCTATTGCAAAGAACAAGAAACACAAGAAGGACAGCAAG
GAGGGTAAGACCAAGAAGAAGAGAGGAGAAGGGTAGGGGGGAGGTGGTGG
TGGTCGAGACAAGGAGGGCCCAGAGGCCGAAAAGGAACGGATTCGGAAGG
AGATGGAAGAGGTTGCAGAGAAGGTCGACATATCTAACGATTTTGAGGCG
AGTTTAGTCGTTAGTTTCTTATTTTTCAAGGTTTTAAGATTTGTATTACT
TTATTACTCTGTTACTGTTTCTAAATGGGACTATGTCGACGATACTTGAA
GGCTAACTGGCCATTGTTTATATTAGTACTAGCATTAGCATTAGTATTAT
TAATGTGGAGAGCACGTTCCTGAAGTTCCTGGAGTTTCCTGAACCCCGAC
CCCTACACAACGATCAATGGTATTTTATCCCTTTCTCGGAACAGCTTTCT
AGCTGTGTCCGACCCTGGATGGCCGATCAAGTTACGACAGAACAAAAGTC
AAGTGCTTGCTCTGCACTACATCCCAAGACTTAGAACCGACCCGCATAGA
GCAGGCGGTGTCCCCTCTAGAACCAGTCTCTCCCGGGAGCATCGTGTTCT
CACTTGACGCCAGGTTTCCTTCTTGGGAACAAGCACGCGAGCACACGCGT
ACAGCTGTGTATCTACGTAGAAATCTATCGTAGTTCTAACGAAGGAGCCC
ACGGACGCGGCTACAACAGCTATCTCTGTCTGGCCTTGACATTATAGACA
TGAGAGCGGCACGGACGAACCTCAAGGAGGGACATAGCATGCCTTCTATG
TGCTCGTTACGGGCTCTCACTTTTCCGCCGCCGCTACTGCAATACCACCA
CCAATATCACGTTCGCTTTTCAGCGGGACTCGGGCGCACCGGTCCCACTG
TGTTTACGGAACAGCGACCTGCGCATGATTGCGGACGATTGGCAATATTT
GTAACTAATAGTCCCAGCGATTGGCGGGAACTCGCGCCAAGGCGGCATCG
TAGGCGATTCAATTGCGTGAAAACATCTGGGGAGATAATTGGGGTAGAAG
GGTTGCATGCAACGTCGTACCAGACGTAGCTGTTGGCGTGCGACGTACTG
GAAACTTTGAGGCCGCCTAATTCGCGAGATATATCGAACAGTCGATCATG
AGTTACTCGCTATTTGCAGAGCCCTCCACGGAAGCCCCTGCTATTTTATC
CGCTACCTTGCCTAGAAGACTGTAACGACATGCTCTCGTCATCACGATCA
ATACACCCAGACCCGTTAGACCCTCGGGTACGTCGAGTGACGAGTTGCCG
TTCAAGTCTCGAAGTGAGTAAACCAATGGTGGGCTGACTGTCTTATAGCG
GGTAGGGCGGTATATCAAGCCTGCAGAAACGCTCATTGTTGTTTCCTTGT
CATGGGTACAAGTATTCACCGAAAAACACCTCACTGCGACGTTACCAGTA
CCCCAAGAATAAAACACTGGGGGAACTCGACAGCTGGAGCACGTCAAGAT
TCGTGCAGACAAATACGAATAATTGGTGTATTCGCCACGAAAATTTACAA
GTATTCGCATGAGTTTCAGAGTAAGCGGACACATAGAGTAGAGGTACGAT
CCATATCCATTCGATTAACGAGTATTATTAGTAGTTGTGAATGATCCGGG
GCACATAGACTACACGAGTTCATTCTGAAACTCAGGCGAATAGTTCTAAT
TTTCGTGGCGAATACGCCAATCATTTGTATTTGTCCGGGGATGAATATGT
TCCAGTACCTGTGCCTTTCGAACAGGGAATAGTATAAACGGCGTAGTAGC
GTCTGTCCTTGGCGCACAAATTATAACTGTCGGAGAAACTGTGCGCACAG
GCAGCGCATAGCCTTACGGATAGTGGCAGGCCCAGTGCAACTTTGGGTTT
GAAATTCACCCCTTTATCTTTAGAAAGCAAGCTGAGGGGGAGTGCATGCG
TGTTGGAGCAAATAACCACGGATACTCAAAACGATTCTTGAGCTTGCCCA
ACGGTTGTTTGGCAAGCACATGTTACAGACCCAAAGTATGTACGTATGCA
AAGGTACCTGGCAATTTACGTGGCACTTAGCGCAGGATATAACTCGCCGC
AAAGTAGCTATCTTTGCGGATCATACGTGCCATATGTGCTTTTGCCTGAT
ACCTCACTCCATCGCCAGTTGGTGTCTGCGGCACGGGGCACAACCACCGC
CTTGCATTCATCCGCCAGCATGAAATAAAGTTTTTGTGATGTACGAAAAT
GTACCATATCCCAGTCAAAACAAAATGATGAACAGGTCAGGTGGGTGCTG
ATGCCGATTTTCCGTGTTTCTCGAAGTATTTCACCTGAAAAAAAATGAGA
TCCTCCGCTCTGCAGCAATTCACCCTGTACGGGTACAGGGTCAGTCAATT
TGCAATCTGCTGACGGATCGCTTGCAATTCGCGGATATATTTGTTTTACC
CATGACACTCGGCGAGATCACATTGCCCGTTGAAACCGTCGTCTTGTCCC
ACTTAGGTCCAGATAAGGTGTTACCGGACAATAGTATCAGTATCACGGGG
GCTTTTTAGCGACCTTAGACTGGGACAAACAGACGATATCTTTTGGTGAT
AGCAAAATCACCATTCCTGCCGTTCATCGAAAATCGGTGAATCAGGCATC
TAACATGCACAAGTCATCCGCGTCCTGTTCAGTGATAGCACAATGTCCAA
ACACCGCGTTCGTACCAGTGTACCTGCCAAGAAAATGCGACATTCCTGCA
CGACACAAGATAGTGGTGCACGTCACGACAGACGTTGCCCCGGATCAGAT
AGTACCTGCATGTATTGAACCACTGATAGCAAAATAACAACAGTTTCACC
ACAACCCGAGCCATATATACATTTGGGGGACATGAAGTAGTTGCTCGAAC
GGTTAGCAATTGGGAGCCAAGCAACAAACACAGTGCCGCCGTAATCCAAC
TTGCCAACCCGTTTAACAGGGGCATTACAGTCCCGGTCAACACTGTTCTA
GGCCACATTACACCCGTAACCGTCGCTCCTCCGTCAGTCATCAGTATAGT
AGCAACTACCCCAGGGGATAGGACTGCTGTACATGACGAATTAGCCGGTG
TGCTCAAGACCATATTTGTCATCACCGCGTGTGACAAGGAACAATGCCCT
AGTCCATGGGGTTCACCTGTAACTCTCATAATTCGGAGTGACGGCCGGCT
GCGTTTCTGTGTCGATTATCACGCGACCGTAATTAAGCATCTTGTCCGTG
AAACTTTGCCCATACAAGATATCGCGGCACACATCGATGCTGAAGGGGGT
GCACACTTTTTCTCCGTGTTCAATTTGGAAGCCGCCTATCACCAGAGTCC
TGTAGAGGAACGAGATATCGAAAAAACGACCTTTGTAACGGATAAAGGCA
AGTACATTTCAAGTGCATGCCGCTTGGCGTTGTGATTGCACCATGGTTGT
TCCAAAGAATCGTAGCATTGACGTTTGCCAATTTCGCAGCGGCCTGGTCT
TATATCTCGACGATTTAATCGCGTTTTTAGCTACGTGGAAATCCCATCTA
CAGTTGCTGGAGGACATTTTCAAGGCACTCCAAGTAGCTGGTTTGAATTT
AAAGCCATCTAACGCCCTATTTGGACTCACGTCAAACACCTTCCGACCGC
TCCTTACCGGTTCTATTTCTCGTCTGATCTACGTCAGCTCGACTGAGGTA
TTCACATCCATAGATCTGAAAAAGTTACGCCAAGCTCAAGCCATTGAATT
CGAGCTGTACCTGAAATATCTGGCAGATAATAAGGCTCCATTACCGCACA
ATGAAACAGTACCATCCATGTCGTACTATTTTGAGCAAGACGGACTCCTG
TTCAGATCATACTTACCCGGGCATTTGAGGAAACGGAGCACATTCCGTAG
CCAATTAGTCGTGCCACAAGCTCTTGTAGGGGCAGTTTCACACGCATTCC
ATGACGACACATCAGGAAGGCACCTAACGTATAAGCCCACCTTTGATCAA
ATCCGTTACCGTTTAATGGTGGCCAACACTGCATCGCGATGTGAAAACAT
TGTGCAATAATTGCCGGGCATATCAACGCCGGAAAACCACCCACAACCGT
CCGAAATTACCGGTGGGTCATGTACCAGTAAAAACGCTATTCGAGCGAAT
TTACATAGACCTAGTGGAGTGCAAATCATTCTCTCTTTCCGCAACTGGGA
CTTGGTGAAAGCATATGGTCTCATTCATCGACCATCTCACTCGCTTTGCT
CTATTTTTTCCAGTGCCGGAAAAACCAGCAAAGACCATCGCAGCGACAAT
CAATGAACGTGTCATTGGCGTTTTCGGGCCTCCAGAAATTCTGTAGTCAG
ACCAGAGGCGGGAATTTAAGAACCAAGTCGTGTACCAGCTGAAGAACGTG
TTTGACTACAAGAAGACGCGCACGACCGGTTACCGTCGGCGGGGTAACTC
TGGTTTGGAACGGATTCACTCGACGATGCATGCAATGTTATCCATATATA
GCAACATAGCTCAGGACAATTGGGCATCCCTGCTGCCGTTTTTCCAGCGA
GCCCATAGCACGTCATTCAGTGACACCATGCACGAAATACCATACTTTCT
TATGTTCGGACGACAAGCTTGTTTACCGGTAGATATCATGCACGGTATCC
CGCACATTGGCCATAGAGCTAACATGAACGAGTTCTGTCAGCACACCCGT
GGAAACTTACAACTCACATTCGCCTTAGCTCGTCGTAATTTAGGTGAATG
CGCAGAGAAACAGGCTGAAGCTAACCGTAGCTTGCCAGACTTTACTATTT
TCCAAGCAGGGCTACAAGTGTTCGTGCACCAGCCTTATCAAGACTCCGAT
GGGCCGAATCCAAAATTTCTTCACCCGTGGCGTGAGCAGTATACCGTTTC
TTCTCAGCTGTGACCAGCGGTGATACAAGAAGTTTCGGTTCACTTCGCCC
ATATCAAGCCATATCGCCCACGCAATAATCCACTGGCAACTGATTTGGCC
AAGTTGGGAGATATGTACTCAAGTAGGCCAATTCCATCACCCGCTCTGGA
TCGCCCAGAACTGACTCAACCCCGTGTCGCGTCACACAAACTTGACAATA
CTGTGGAGCACCAGATTCAAAAGGAGATTGTTATATCAGTTACAAGTTTT
TTTCGGCTTGTTTTGGTCGGCTGCTTAACCTCAACATGGGTACGTTGGAG
TCATTATATGAGCGAGATAGTAACGAGTGGGTTGGCTCATGAATGAGGCT
CGCGGTGGGTGAATGGGGTATTTTATTTCTGTCGTGCGTTTGTTCATGTA
AAAGCCATTTCGTGTTTACGTACAGTACAGACACGAGTAATACGGTAACA
CTCCCTTGCGAAGATTGTTACAGCCCGTGTTGTTCTTGGTCAAAGAGCTG
CGAAAATTCGTTATGATCGACGTCATGATGGGGTAAAAAAATTGTGTGAC
GTGAGCAAACTCCTGTCGATCTACCGAGCAACATACCCAAATATCCGTTA
AGTCCATTGGAAAGTCAATCCACCCGATGGGCACGCGTGGATGGACGTGG
ATAAGTTGTAGGAGGATAACAGAGAAGTAAACAATTTTTCATGCACGGCT
CGTTCAGCGTAGTGTGTGTTCCAAGTTCTCATAATGAGTCCCAGGCTACA
GCTAGCACTCCGAAATACGTCTCTCGTTTGTTTAGTTTCTTTATAGTAAT
CTAGCAACTTGATTATTCTGAGCATACATACTTTTTGTGTTACGGCCATT
TGTCATGTTTTTTACATTTCTCAATTTGATATTTTTGCTACGTTTGTACT
CTACTTTAAAGTACCGCTCTGTTACTCTATCACGACTCCCCTGTTCAGTT
TGTTCATTTTGTGGATAATGACCTAATAACCAAGTAATCCAGCAGGTTGA
AGATATTGAGCATACGTGCGTTTTGTTTAACGACTATTTGTCATGTTTTC
TACAGTACAGTAAGTTGTGCATATCATTTGCTTGTACTTTCGACTTGCTA
CTTACTCTATTAATATGATACAATTTCAAACCTCATTCTTATACTGTAGA
CGCCATCCTCCTGATGAAGCTGTCCTTGGCAATTGATGCCTGTGTTGCTA
TGTTGTAGTTGGTGGTAAATTTCTTGCTCCTGCATGATGTGCAATAACCC
CCCCCGCCCCCCCCCCCCACGAGCACAGTAGACATGGCTGAGCGAGATGA
CGGAATCCTTCTGGGCCTTCAAACGATCCCTCGGGGAAGTCCCCGACGAC
GGGGAGGATGACCCCGCCATCAAGCCCAAGCCCAGCATCTCGCAAGCCTT
CGTGACCAAGAGGCGTGCGGAAATGCTGGTAGCTGAGCGCACGCAGGAGA
AGATCCGGCGAGAGCAGCAGGCCGAGAAGCGGGAGGAAGCCAGGGCGCTC
AAGCTGGACGAGAAGAAGAATAATCAGCGCTTTGGGGAGGTCGAACACGC
CCTCAGGGAAGAGA
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Coding sequence (CDS) from alignment at H-paniculata_contig4510:1866..13429+

>mRNA_H-paniculata_contig4510.11350.1 ID=mRNA_H-paniculata_contig4510.11350.1|Name=mRNA_H-paniculata_contig4510.11350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig4510:1866..13429+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGAGCTTATCGCGGGCGACTTCACGTCAACGCTGCTGAGCACGTT
CCTCTTCGATGCGCTGTTTCTGTTTAAGATGTCGGAGCTTATCGCGGGCG
ACTTCACGTCAACGCTGCTGAGCACGTTCCTCTTCGATGCGCTGTTTCTG
TTTAAGATCGTCAACTTCGGCTACCACCACTCAAAGATCATGTTGCTCAA
GTACCGCACCGGGCTGAGGGTCGTGGTCATAACGGCCAACCTCACCCCTA
ACTGTCGGCAAGGGAAGTCGCAAATGGTATGGTACCAAGACTTCTCCAGG
AAAAAGCCGTACGAAGATGATAAGAGAGAGGAACGCGATAAGTTCAACGG
CTATGCGATCGTCAACTTCGGCTACCACCACTCAAAGATCATGTTGCTCA
AGTACCGCACCGGGCTGAGGGTCGTGGTCATAACGGCCAACCTCACCCCT
AACTGTCGGCAAGGGAAGTCGCAAATGGTATGGTACCAAGACTTCTCCAG
GAAAAAGCCGTACGAAGATGATAAGAGAGAGGAACGCGATAAGTTCAACG
GCTATGCGGAAACGGAGCAGGAAGAGGCAGATGCAGCCGAGACGGCGAAG
CCGATCGAAGAAGCGCAGGCGGCGGGAGCGGCGGCGAAGGAGCTAGCAGA
TTCCGCGGCTATTGCAAAGAACAAGAAACACAAGAAGGACAGCAAGGAGG
GAAACGGAGCAGGAAGAGGCAGATGCAGCCGAGACGGCGAAGCCGATCGA
AGAAGCGCAGGCGGCGGGAGCGGCGGCGAAGGAGCTAGCAGATTCCGCGG
CTATTGCAAAGAACAAGAAACACAAGAAGGACAGCAAGGAGGTAGACATG
GCTGAGCGAGATGACGGAATCCTTCTGGGCCTTCAAACGATCCCTCGGGG
AAGTCCCCGACGACGGGGAGGATGATAGACATGGCTGAGCGAGATGACGG
AATCCTTCTGGGCCTTCAAACGATCCCTCGGGGAAGTCCCCGACGACGGG
GAGGATGA
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