prot_H-paniculata_contig451.11348.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig451.11348.1
Unique Nameprot_H-paniculata_contig451.11348.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length386
Homology
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Match: D8LPN2_ECTSI (Cir_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN2_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 2.940e-102
Identity = 233/409 (56.97%), Postives = 271/409 (66.26%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIAQERVVETLRKKRLMTEQEKGDKQPEAQPKSKXXXXXXXXXXXXXXRRRKGDDKNGRE------LGGTGQGWGGTLQHVNLFEDAEREAGKRLGQNADHQREKREQELREQQRSGLAPTALGEGSAELKDSDAQPWYGLVK---SASVRSEVARAVKLGREVVGEEAEAVLKRDEGRKGRADPMGSLFQACTHDGTHKTAENIPASGARGAMGSPGVSSSGGAKEAGAFKLDGTSPGRGDKRHKKKXXXXXXXXXXXXXXXXX-----------RSHRD--GKVHGDRPKG--SGVSNEESDTSRQQALEEMRRKRLAREGGERSREIRLLAEREMAGQPLPDERRMAYHNQYNAPAARQNRPR 385
            MSGRLIILPKKSWH GKRENIEKVLRDERLA EEAAA RERAREI QE +VETL KKR  +E  +G+                        RRR+G DK   +      LGG GQGWG TLQHVNLF DAEREAGK LGQN+DHQREK+EQEL+ QQRSGLAPTALGEGSAELKD ++QPWY  ++   +A V    AR V+LGREV G+EAE  +KRD+GRKG+ADPMGSLF++    G      ++P    RG    P  +++     AG    + TS     K     XXXXXXXXXXXXXXXXX           RS RD   + H D   G   G ++E +D  R+Q L+++R +RLAREGGER R+IRLLAEREMAGQ LPDER  AY+NQYNAPAARQNR R
Sbjct:    1 MSGRLIILPKKSWHPGKRENIEKVLRDERLAAEEAAAARERAREITQEGIVETLTKKRSASETIEGE--------------ANAASGTPASRRRRGQDKRRSQDRDEEALGGKGQGWGATLQHVNLFSDAEREAGKILGQNSDHQREKKEQELQRQQRSGLAPTALGEGSAELKDKESQPWYTQLQPQSTACVSKVAARTVRLGREVTGQEAEEAIKRDQGRKGQADPMGSLFRS----GAQPMRGSLPLE-RRGTSYQPEAATANLPGAAGLCVDEATSHSNRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRTRSDRDRFARRHSDSAAGLSGGRADEATDAQREQKLKDLRSRRLAREGGERERQIRLLAEREMAGQSLPDERTRAYNNQYNAPAARQNRIR 390          
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Match: A0A836CIP7_9STRA (Cir_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.320e-30
Identity = 100/237 (42.19%), Postives = 123/237 (51.90%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIAQERVVETLRKKRLMTEQEKGDKQPEAQPKSKXXXXXXXXXXXXXXRRRKGDDKNGRELGGTGQGWGGTLQHVNLFEDAEREAGKRLGQNADHQREKREQELREQQRSGLAPTALG-EGSAELKDSDAQPWYGLVKSASVR---SEVARAVKLGREVVGEEAEAVLKRDEGRKGRADPMGSLFQACTHDGTH 233
            MSGRLIILPKKSWHV +R+N+E+V RDERLA E      E+A+   QE  VETL++KR    Q         QP +K              R      K G   GG  QGWG   QHVNLF + E     R G N +H REK +QEL  Q+R G AP ALG + + EL+     PWY    SA+     +  A  V  GRE+ GE A+  L RD+ RK   DPM +L +  T    H
Sbjct:    1 MSGRLIILPKKSWHVWRRDNLERVKRDERLAAEAQEEADEKAQRADQEIRVETLKRKREQQHQ---------QPSAKVGDGRGRKSQKSTAR------KGGDAGGGVDQGWGTGAQHVNLFPEPEA----RSGGNVEHLREKEQQELLRQRREGAAPVALGGDAAGELQ---LAPWYSKPASAAAAQASTAAATVVVRGRELEGEAAKRALGRDDRRKALLDPMAALIRPVTTAAEH 215          
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Match: A0A4D9D443_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D443_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.050e-7
Identity = 68/180 (37.78%), Postives = 93/180 (51.67%), Query Frame = 0
Query:    2 SGRLIILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIAQERVVETLR-KKRLMTEQEKGDKQP-EAQPKSKXXXXXXXXXXXXXXRRRKGDDKNGRELGGTGQGW--GGTLQ-HVNLFEDAEREAGKRLGQNADHQREKREQELREQQRSGLAPTALGEGSAELKDSDAQPWY 176
            SGRLIILPKK+WHV  ++N E+VLRDERL  EE A   E+ R++A++  +E LR +KR   E E  D    EA   S+              R   G D  G  +     G+  G   Q HV+LF        K+ G N D+ RE+  QELR+++  G+AP     G  ++K   A+ WY
Sbjct:   22 SGRLIILPKKTWHVWNQDNRERVLRDERLHREEEAKQAEKQRDVARQDRLEMLRARKRQRDEGEDADVSHFEATSASEMGGGGVGALALGASR---GLDNEGLCIPAAKSGYVEGANHQGHVHLFGQVAEHLAKQAG-NKDYVRERAAQELRKKRAEGVAPW----GFDDVKP--ARQWY 191          
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Match: A0A2R5LJQ0_9ACAR (Putative leukocyte receptor cluster member 1 (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LJQ0_9ACAR)

HSP 1 Score: 59.3 bits (142), Expect = 2.940e-6
Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 0
Query:    7 ILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIAQERVVETLRKKRLMTEQEKGDKQPEAQPKSKXXXXXXXXXXXXXXRRRKGDDKNGRELGGTGQGWGGTLQHVNLFEDAEREAGKRLGQNADHQREKREQELREQQRSGLAPTALGEGSAELKDSDAQPWY 176
            ILPKKSWHV  + NIE+V RDE LA EE    + R +    E  +  LR++  +    +G    +   +                     +D++ R+            +HVN F+D E       G+NADH+REK+E++   +++ GL  T LG+GS+E   S +  WY
Sbjct:    4 ILPKKSWHVRTKRNIERVRRDEALAAEEEKEQQRRVQLAESEARINLLREQAKLRSGGQGHSAVDGAKRESLSQ----------------EDEDERKQ----------KEHVNFFDDVESAQRSLHGKNADHEREKKEEQETYEKKIGLL-TYLGQGSSEASGSSS--WY 144          
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Match: UPI0001CBB9E5 (leukocyte receptor cluster member 1 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB9E5)

HSP 1 Score: 57.4 bits (137), Expect = 1.140e-5
Identity = 72/224 (32.14%), Postives = 98/224 (43.75%), Query Frame = 0
Query:    7 ILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIA---QERVVETLRKKRLMTEQEKGDKQPEAQPKSKXXXXXXXXXXXXXXRRRKGDDK----NGRELGGTGQGWGGTLQHVNLFEDAEREAGKRLGQNADHQREKREQELREQQRSGLAPTALGEGSAELKDSDAQPWYGLVKSASVRSEVARAVKLGREVVGEEAEAVLKRDEGRKGRADPMGSL 223
            ILPKKSWHV  ++NIE+V RDE  A   AA  +E+ R IA   QE     LR+K                                  R+R G D+    +G +           L+H N F + E E  K +G N +H+ EKR+++ + ++  GL  T LG+ SAE KD  A+PWY   KS S R +             EE E     D  RK   DP+  +
Sbjct:    3 ILPKKSWHVLSKDNIERVRRDEEKA---AAEEKEKQRRIALAEQEARTAHLREK---------------------------------ARKRHGRDEPTMVDGADSSIVATTEATELRHPNFFSEIE-EGKKTVGVNKEHEEEKRKEKEKYEKSIGLL-TYLGQSSAEAKD--AEPWY--FKSPSKRKKC------------EEGEDDSTVDRKRKDTLDPLKDM 172          
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Match: A0A7S3XLM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLM5_HETAK)

HSP 1 Score: 52.4 bits (124), Expect = 7.690e-5
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MSGRLIILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIAQE 48
            MSGRLIIL  KSWHV  ++NIEKV +DERLA EE    +E+ R + QE
Sbjct:    1 MSGRLIILRHKSWHVWNQDNIEKVKKDERLAAEEEEKNKEKQRLVDQE 48          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig451.11348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LPN2_ECTSI2.940e-10256.97Cir_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CIP7_9STRA1.320e-3042.19Cir_N domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9D443_9STRA1.050e-737.78Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2R5LJQ0_9ACAR2.940e-631.18Putative leukocyte receptor cluster member 1 (Frag... [more]
UPI0001CBB9E51.140e-532.14leukocyte receptor cluster member 1 homolog n=1 Ta... [more]
A0A7S3XLM5_HETAK7.690e-560.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..48
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainSMARTSM01083Cir_N_3coord: 12..48
e-value: 5.7E-5
score: 32.5
IPR019339CBF1-interacting co-repressor CIR, N-terminal domainPFAMPF10197Cir_Ncoord: 12..48
e-value: 2.4E-8
score: 34.0
IPR039875Leukocyte receptor cluster member 1-likePANTHERPTHR22093LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1coord: 4..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig451contigH-paniculata_contig451:16901..18468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig451.11348.1mRNA_H-paniculata_contig451.11348.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig451 16293..20726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig451.11348.1 ID=prot_H-paniculata_contig451.11348.1|Name=mRNA_H-paniculata_contig451.11348.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MSGRLIILPKKSWHVGKRENIEKVLRDERLAEEEAAATRERAREIAQERV
VETLRKKRLMTEQEKGDKQPEAQPKSKKGDEQPEAQPKSKKRRRKGDDKN
GRELGGTGQGWGGTLQHVNLFEDAEREAGKRLGQNADHQREKREQELREQ
QRSGLAPTALGEGSAELKDSDAQPWYGLVKSASVRSEVARAVKLGREVVG
EEAEAVLKRDEGRKGRADPMGSLFQACTHDGTHKTAENIPASGARGAMGS
PGVSSSGGAKEAGAFKLDGTSPGRGDKRHKKKRKKEKHKEKSKKEDRRKR
SHRDGKVHGDRPKGSGVSNEESDTSRQQALEEMRRKRLAREGGERSREIR
LLAEREMAGQPLPDERRMAYHNQYNAPAARQNRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019339CIR_N_dom
IPR039875LENG1-like