prot_H-paniculata_contig4509.11344.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4509.11344.1
Unique Nameprot_H-paniculata_contig4509.11344.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A6H5K0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D3_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 7.340e-25
Identity = 63/113 (55.75%), Postives = 77/113 (68.14%), Query Frame = 0
Query:    4 ECADRCARRQQPELVLIYSLWVGGAWFVTPTALNYQRRMSDRDLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARVGA 116
            E A RCA          Y L + G   V    +  +  M DR+L +W SD+LHDV+GFSESSTAQF+VALAR+ +K+G+GAA+LL  L D+DVP  NATSRAFA ELMARVGA
Sbjct:   42 ESAGRCA---------CYLLQLSGYSGVQHNTIFEKSSMGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPA-NATSRAFAAELMARVGA 144          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: D8LHZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.620e-22
Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query:   42 MSDRDLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARVGA 116
            M DR+L +W SD+LHDV+GFSESSTAQF++ALAR+ +K+G+GAA+LL  L D+DVP  NATSRAFA ELM RVGA
Sbjct:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVLALARRASKSGKGAAALLAGLSDLDVPA-NATSRAFAAELMTRVGA 74          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A835YTF2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.340e-14
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 0
Query:   42 MSDRDLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARVG 115
            MSDR++ RW SD+LHD+LG+S+++TAQFI ALA++       A +L+E+L D DVP +++T R+FA+EL+ +VG
Sbjct:    1 MSDREVNRWVSDKLHDILGYSDNTTAQFITALAKR----ATSADALVEQLADNDVPVNDST-RSFARELLMKVG 69          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A2V0NYA0_9CHLO (RNA helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYA0_9CHLO)

HSP 1 Score: 60.5 bits (145), Expect = 4.240e-8
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   43 SDRDLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARVGAETSGAG 122
            SDR+L  W SDRLHDV GFS+ +TA FI+A ARK AK G   A+L   L    +P D     AFA EL++R+   +SGAG
Sbjct:    3 SDRELRAWVSDRLHDVAGFSDRTTADFILATARK-AKAGP--AALARALSAAGLP-DTPPVAAFAAELLSRL-PSSSGAG 77          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A2P6MWU7_9EUKA (DEAH (Asp-Glu-Ala-His) box polypeptide 16-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MWU7_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 9.380e-7
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query:   46 DLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARV 114
            DL+ W SDRL D+LG SE +   F+VALARK +   Q    LLE L   D+P   AT + FA EL+ R+
Sbjct:   95 DLSYWVSDRLQDILGASERTLVDFVVALARKSSSKNQ----LLESLSSNDIPITPATHK-FADELLQRL 158          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A0D2KYR4_9CHLO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KYR4_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 2.140e-6
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   43 SDRDLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEK-LGDVDVPTDNATSRAFAKELMARV 114
            SDR+L  W SDRLH+++GFS+ +TA FI+A A+K+    +G+A  L + L    +P DNA   AF  EL++R+
Sbjct:    3 SDRELRSWVSDRLHELVGFSDRTTADFILAQAKKV----KGSAPALGRHLSAAGLP-DNAAVAAFCGELLSRL 70          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A2R5G1Z9_9STRA (ATP-dependent RNA helicase DHX8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1Z9_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 8.200e-6
Identity = 26/66 (39.39%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   49 RWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARV 114
            +W SD+LH+++GFSESS   +++AL     K+ +  + ++ +L + D P D  T R FA+E+M+RV
Sbjct:   10 QWTSDKLHELVGFSESSAVDYVIALG----KSAKSESDVVSRLHEYDFPRDERT-RQFAREVMSRV 70          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A183DHK1_9BILA (Uncharacterized protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183DHK1_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 1.850e-5
Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0
Query:   50 WASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARV 114
            W SD+LH +LG S+ +T Q+I+ALARK     +    LL++    +   D    R FA ELMA+V
Sbjct:    5 WVSDQLHTLLGCSDHTTVQYILALARKSVDADE----LLDRFRSTEAMKDTPEVRRFASELMAQV 65          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A197JRC9_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JRC9_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 2.570e-5
Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = 0
Query:   42 MSDRDLTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMAR 113
            M  +DL RW SD    VLG S+++T  F++A A+    T +  A LL+  G +D+PT++ T ++FA+EL  R
Sbjct:    1 MDPQDLKRWVSDASIKVLGMSDNTTRDFLIACAQ----TAKSPADLLKSFGAMDIPTNSRT-QSFAQELFQR 67          
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Match: A0A1D2MZH7_ORCCI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MZH7_ORCCI)

HSP 1 Score: 52.0 bits (123), Expect = 3.650e-5
Identity = 27/68 (39.71%), Postives = 44/68 (64.71%), Query Frame = 0
Query:   47 LTRWASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDNATSRAFAKELMARV 114
            + RW SD+LHD+LG S+ + A+F VALA+K + + +G  S ++  G ++V +   +   FA+EL  RV
Sbjct:    4 IERWVSDKLHDILGMSDRTMAEFFVALAKK-SSSAEGLISKIKDTGTIEVDSSVVS---FARELFERV 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4509.11344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K0D3_9PHAE7.340e-2555.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ7_ECTSI1.620e-2269.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTF2_9STRA9.340e-1451.35P-loop containing nucleoside triphosphate hydrolas... [more]
A0A2V0NYA0_9CHLO4.240e-851.25RNA helicase n=1 Tax=Raphidocelis subcapitata TaxI... [more]
A0A2P6MWU7_9EUKA9.380e-747.83DEAH (Asp-Glu-Ala-His) box polypeptide 16-like n=1... [more]
A0A0D2KYR4_9CHLO2.140e-645.21Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A2R5G1Z9_9STRA8.200e-639.39ATP-dependent RNA helicase DHX8 n=1 Tax=Hondaea fe... [more]
A0A183DHK1_9BILA1.850e-541.54Uncharacterized protein n=1 Tax=Gongylonema pulchr... [more]
A0A197JRC9_9FUNG2.570e-540.28Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A1D2MZH7_ORCCI3.650e-539.71Putative pre-mRNA-splicing factor ATP-dependent RN... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 17..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4509contigH-paniculata_contig4509:1927..13607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4509.11344.1mRNA_H-paniculata_contig4509.11344.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4509 1927..13607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4509.11344.1 ID=prot_H-paniculata_contig4509.11344.1|Name=mRNA_H-paniculata_contig4509.11344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MRQECADRCARRQQPELVLIYSLWVGGAWFVTPTALNYQRRMSDRDLTRW
ASDRLHDVLGFSESSTAQFIVALARKMAKTGQGAASLLEKLGDVDVPTDN
ATSRAFAKELMARVGAETSGAGSKQRG
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