mRNA_H-paniculata_contig11775.1134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11775.1134.1
Unique NamemRNA_H-paniculata_contig11775.1134.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: D8LPT9_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI)

HSP 1 Score: 439 bits (1128), Expect = 1.900e-141
Identity = 212/251 (84.46%), Postives = 231/251 (92.03%), Query Frame = 1
Query:   28 VKQPDARSGNKMLSPEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKRNDEQAEV 780
            V+Q  A  G KMLSPEDCTSLIEAFTE+QI NHV+SLDTG+H+SQ+RIQAAA AVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGT+A+KLAK+G+GGY +H EFAADVQLVFDNAMKYNG ESEVYPVA +MKK+F KDWA A+KRME EE  RKERGETCNLCGY AKTFEPMTYYCNGAQCNGKRI RGRYFYHA+ S QWHWCSSCYNDLK+G+IIA+AETAVRKADLKRK+NDEQAEV
Sbjct:  369 VQQARATPG-KMLSPEDCTSLIEAFTEDQILNHVKSLDTGMHVSQERIQAAAGAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDWALALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHATGSNQWHWCSSCYNDLKDGEIIALAETAVRKADLKRKKNDEQAEV 618          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 1.810e-140
Identity = 216/264 (81.82%), Postives = 241/264 (91.29%), Query Frame = 1
Query:    1 QMVVTGMPGVKQPDARSG-NKMLSPEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFE----IITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKRNDEQAE 777
            QMVVTG PG++QPDAR+   KMLSPEDCTSLIEAFTEEQI NHV+SLDTG+H+SQ+RIQAAA AVLTKLR+S FGWVFNDPVDPV+LNLPDYFE    IITHPMDLGT+A+KLAK+G+GGY +H EFAADV+LVFDNAMKYNG ESEVYPVA++MKK+F KDWA A+KR+E EE  RKERGETCNLCGY AKTFEPMTYYCNGAQCNGKRI RGRYFYHA+ S QWHWCSSCYNDLK+G+IIA+AETAVRKADLKRK+NDEQAE
Sbjct: 1266 QMVVTGTPGIQQPDARATPGKMLSPEDCTSLIEAFTEEQILNHVKSLDTGMHVSQERIQAAAGAVLTKLRNSTFGWVFNDPVDPVYLNLPDYFEASRRIITHPMDLGTVARKLAKEGAGGYLEHEEFAADVRLVFDNAMKYNGPESEVYPVADRMKKEFNKDWAAALKRLEAEENARKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHATGSNQWHWCSSCYNDLKDGEIIALAETAVRKADLKRKKNDEQAE 1529          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A448Z166_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z166_9STRA)

HSP 1 Score: 218 bits (554), Expect = 5.750e-61
Identity = 110/236 (46.61%), Postives = 149/236 (63.14%), Query Frame = 1
Query:   70 PEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKRNDEQAE 777
            P++  +LI  F+ EQIE H+ SL+ GL L   +++A+   VL  L+  Q GWVFN PVDPV L LPDYFE+I  PMDLGTI KKL    +G Y   ++F   VQ+ FDNAM YN   S VY +AN+MK  F +D+   MK++  EE  ++  GE C+LCG     FEP  +YCNG  C  KRI R  Y+Y    + Q+HWC  C+ DLK+G ++ +A+ ++RK  L +K+NDE  E
Sbjct:  622 PQEDHTLINCFSVEQIETHIASLNKGLQLPPAKLKASCLDVLKNLQSHQHGWVFNSPVDPVELGLPDYFEVIKQPMDLGTIRKKLE---NGCYHSLDDFHNHVQITFDNAMLYNPEGSVVYNMANEMKTKFIQDFENLMKQLNAEEDAKRRNGEACSLCGCEKLLFEPPVFYCNGHNCPSKRIRRNSYYY-VGGNNQYHWCHQCFGDLKDGQLLELADASIRKEQLIKKKNDETHE 853          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A6S8EDF0_9STRA (Histone acetyltransferase n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EDF0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.000e-60
Identity = 108/246 (43.90%), Postives = 163/246 (66.26%), Query Frame = 1
Query:   40 DARSGNKMLSPEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKRNDEQAE 777
            +A+  N   + E  TSL+ +FT  QI+ H++SL TG  +S  +I+   + +L KL + +  W+F  PVDP+ LNLPDYFEII +PMDLG+I K+L    + GY   ++F+AD++L FDNA+ YNG ES+V  VA +MK  F++ + + +  ++ EE++RK  G+ C LCG     FEP +YYCNG+ CNG+RI R  Y+Y   ++ Q+HWC  CYN+LKE + +   +T + K +L++K+NDE  E
Sbjct:  373 EAKKKNTQATLEQNTSLLNSFTPAQIQAHLQSLKTGFRMSTSKIRHKCSPLLKKLTEHENSWIFMQPVDPIELNLPDYFEIIKNPMDLGSIKKRLE---ANGYKTISQFSADIKLTFDNAILYNGDESDVSKVAKEMKSMFERLYEELIASIDAEEEQRKSSGDVCILCGCEKLLFEPTSYYCNGS-CNGQRIRRNSYYYTGGRN-QYHWCQPCYNELKENEPLEFPDTTLWKKELQKKKNDEMHE 613          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A6U3SN67_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SN67_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.050e-59
Identity = 110/258 (42.64%), Postives = 156/258 (60.47%), Query Frame = 1
Query:   22 PGVKQPDARSGNKMLS------PEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKRNDEQAE 777
            P    P A S  K+L+      P++  +LI  FT EQIE H++SL+ GL L+  ++++    VL  L+    GWVFN PVDPV LNLPDYFE+I  PMDLGT+ KKL    +G Y +  E   D+ L FDNAM YN   S V  +A ++K  F ++W+  M ++  EE+ +++ G+ C+LCG     FEP  +YCNG  C  KRI R  YF+    + Q+HWC  CY+DLKE   I +A+  ++K+ L +K+N+E  E
Sbjct:  230 PSTSAPAAHSNGKVLAVPDGPKPQEDHTLINCFTLEQIETHIKSLNQGLQLAIPKLKSKCGEVLKVLQSHAHGWVFNSPVDPVELNLPDYFEVIEKPMDLGTVKKKL---DNGVYRNLKEVEGDINLTFDNAMLYNPDGSVVSNMAKELKDRFTQEWSVLMTQLHAEEEEKRKNGDACSLCGCEKLLFEPPVFYCNGLSCRSKRIRRNSYFF-VGGNNQYHWCQPCYDDLKEHKPIQMADITLKKSSLDKKKNNEVPE 483          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A7S2VVC1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVC1_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.810e-58
Identity = 115/254 (45.28%), Postives = 157/254 (61.81%), Query Frame = 1
Query:   22 PGVKQPDARSGNKMLSPEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKR--KRNDEQAE 777
            P V  P    G K  S ED T LI  FT EQIE H++SL+  + +S   ++     +L+ ++  QFGWVFN PVDPV LNLPDYFE+I  PMDLGTI K++    +G + D + F AD  L FDNA+ YN   S VY +A  +KK F K++ + M+ +  E  R+ + GE C+LCG   K FEP  +YCNGA C  KRI R  YFY A  + Q+HWC  C+ +LKE D I + +  ++K++L R  ++ND+Q E
Sbjct:  363 PQVLMPLVTQGAK--SVEDQT-LINTFTIEQIERHIQSLNQSIVMSPSALKTRCLEILSNIQKHQFGWVFNQPVDPVELNLPDYFEVIKRPMDLGTIKKRVE---NGCFHDIDTFKADCHLTFDNALNYNSKGSPVYNMALDVKKAFDKEYEKVMRELNAEHNRKCDNGEACSLCGMEKKLFEPAVFYCNGANCPSKRIRRNSYFYVAGNN-QYHWCHQCFQELKE-DGINLPDLQIKKSELARNKRKNDDQPE 608          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A6U9Z8T9_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9Z8T9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 9.330e-58
Identity = 108/237 (45.57%), Postives = 147/237 (62.03%), Query Frame = 1
Query:   70 PEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIA-IAETAVRKADLKRKRNDEQAE 777
            P++  +LI  F+ EQIE H+ SL+ GL L   +++A+   VL  L+  Q GWVFN PVDP+ L LPDYFE+I  PMDLGTI KKL    +G Y   ++F   V + FDNAM YN   S VY +AN+MK  F +D+   MK++  EE  ++  GE C+LCG     FEP  +YCNG  C  KRI R  Y+Y    + Q+HWC  C+ DLKEG +I  + + +++K  L +K+NDE  E
Sbjct:  406 PQEDHTLINCFSVEQIETHIASLNKGLQLPPAKLKASCLEVLKVLQGHQHGWVFNSPVDPIELGLPDYFEVIKQPMDLGTIRKKLE---NGCYHSLDDFHNHVHITFDNAMLYNPEGSVVYNMANEMKTKFIQDFENLMKQLNAEEDSKRRNGEACSLCGCEKLLFEPPVFYCNGLSCPAKRIRRNSYYY-VGGNNQYHWCHICFADLKEGQLIELVGDVSIKKEQLIKKKNDETHE 638          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A7S4AKT6_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKT6_9STRA)

HSP 1 Score: 208 bits (530), Expect = 9.350e-58
Identity = 108/237 (45.57%), Postives = 147/237 (62.03%), Query Frame = 1
Query:   70 PEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIA-IAETAVRKADLKRKRNDEQAE 777
            P++  +LI  F+ EQIE H+ SL+ GL L   +++A+   VL  L+  Q GWVFN PVDP+ L LPDYFE+I  PMDLGTI KKL    +G Y   ++F   V + FDNAM YN   S VY +AN+MK  F +D+   MK++  EE  ++  GE C+LCG     FEP  +YCNG  C  KRI R  Y+Y    + Q+HWC  C+ DLKEG +I  + + +++K  L +K+NDE  E
Sbjct:  433 PQEDHTLINCFSVEQIETHIASLNKGLQLPPAKLKASCLEVLKVLQGHQHGWVFNSPVDPIELGLPDYFEVIKQPMDLGTIRKKLE---NGCYHSLDDFHNHVHITFDNAMLYNPEGSVVYNMANEMKTKFIQDFENLMKQLNAEEDSKRRNGEACSLCGCEKLLFEPPVFYCNGLSCPAKRIRRNSYYY-VGGNNQYHWCHICFADLKEGQLIELVGDVSIKKEQLIKKKNDETHE 665          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A6S8EE49_9STRA (Histone acetyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EE49_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.050e-57
Identity = 102/229 (44.54%), Postives = 151/229 (65.94%), Query Frame = 1
Query:   73 EDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKR 759
            E  TSL+ +FT  QI+ H++SL TG  +S  +I+   + +L KL + +  W+F  PVDP+ LNLPDYFEII +PMDLG+I K+L    +  Y   ++F+AD +L FDNA+ YNG ES+V  VA +MK  F++ +   +  ++ EE++RK  G+ C LCG     FEP +YYCNG+ CNG+RI R  Y+Y   ++ Q+HWC  CYNDLKE + +   +T + K +L++K+
Sbjct:  392 EQNTSLLNSFTPAQIQAHLQSLKTGYRMSTSKIRHKCSPLLKKLTEHENSWIFMQPVDPIELNLPDYFEIIKNPMDLGSIKKRLE---ANNYKTISQFSADTKLTFDNAIIYNGDESDVSKVAKEMKSMFERLYEAMIASIDAEEEQRKSSGDVCILCGCEKLLFEPTSYYCNGS-CNGQRIRRNSYYYMGGRN-QYHWCQPCYNDLKENEPLEFPDTTLWKKELQKKK 615          
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Match: A0A1E7FGE5_9STRA (Histone acetyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGE5_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.210e-57
Identity = 105/236 (44.49%), Postives = 145/236 (61.44%), Query Frame = 1
Query:   70 PEDCTSLIEAFTEEQIENHVRSLDTGLHLSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMKKDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQCNGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKRKRNDEQAE 777
            P++  +LI  F+ EQIE H++SL+ GL L   +++     VL  L+  Q GWVFN PVDP+ L LPDYFE+I  PMDLGTI KKL    +G Y   + F   V   FDNAM YN   S VY +AN+MK  FK+D+   MK++  +E  ++  GE C+LCG     FEP  +YCNG  C  KRI R  Y+Y    + Q+HWC  C+ +LK+  ++ +A+ ++RK  L +K+NDE  E
Sbjct:  146 PQEDHTLINCFSVEQIETHIKSLNKGLQLPPLKLKVKCLEVLKVLQGHQHGWVFNSPVDPIELGLPDYFEVIKIPMDLGTIRKKLE---NGCYHSLDSFHTHVHTTFDNAMLYNPEGSVVYNMANEMKTKFKQDFEILMKQLNADEDVKRRNGEACSLCGCEKLLFEPPVFYCNGLSCPSKRIRRNSYYY-VGGNNQYHWCHQCFQELKDNQLLELADVSIRKEQLTKKKNDETHE 377          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11775.1134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPT9_ECTSI1.900e-14184.46Histone acetyltransferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5KPY4_9PHAE1.810e-14081.82Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
A0A448Z166_9STRA5.750e-6146.61Histone acetyltransferase n=1 Tax=Pseudo-nitzschia... [more]
A0A6S8EDF0_9STRA1.000e-6043.90Histone acetyltransferase n=2 Tax=Aureoumbra lagun... [more]
A0A6U3SN67_9STRA5.050e-5942.64Histone acetyltransferase (Fragment) n=1 Tax=Skele... [more]
A0A7S2VVC1_9STRA2.810e-5845.28Histone acetyltransferase (Fragment) n=1 Tax=Tripa... [more]
A0A6U9Z8T9_9STRA9.330e-5845.57Histone acetyltransferase n=1 Tax=Pseudo-nitzschia... [more]
A0A7S4AKT6_9STRA9.350e-5845.57Histone acetyltransferase n=1 Tax=Pseudo-nitzschia... [more]
A0A6S8EE49_9STRA1.050e-5744.54Histone acetyltransferase n=1 Tax=Aureoumbra lagun... [more]
A0A1E7FGE5_9STRA1.210e-5744.49Histone acetyltransferase n=1 Tax=Fragilariopsis c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11775contigH-paniculata_contig11775:3622..7898 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score442.6
Seed ortholog evalue1.3e-121
Seed eggNOG ortholog2880.D8LPT9
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1778@2759
EC2.3.1.48
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Exons6
Model size783
Cds size780
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928886.028532-CDS-H-paniculata_contig11775:3621..37291622928886.028532-CDS-H-paniculata_contig11775:3621..3729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 3622..3729 -
1691480657.0038526-CDS-H-paniculata_contig11775:3621..37291691480657.0038526-CDS-H-paniculata_contig11775:3621..3729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 3622..3729 -
1622928886.0422819-CDS-H-paniculata_contig11775:4313..45081622928886.0422819-CDS-H-paniculata_contig11775:4313..4508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 4314..4508 -
1691480657.0163896-CDS-H-paniculata_contig11775:4313..45081691480657.0163896-CDS-H-paniculata_contig11775:4313..4508Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 4314..4508 -
1622928886.052353-CDS-H-paniculata_contig11775:5238..53011622928886.052353-CDS-H-paniculata_contig11775:5238..5301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 5239..5301 -
1691480657.0275471-CDS-H-paniculata_contig11775:5238..53011691480657.0275471-CDS-H-paniculata_contig11775:5238..5301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 5239..5301 -
1622928886.0672352-CDS-H-paniculata_contig11775:5727..58651622928886.0672352-CDS-H-paniculata_contig11775:5727..5865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 5728..5865 -
1691480657.0349905-CDS-H-paniculata_contig11775:5727..58651691480657.0349905-CDS-H-paniculata_contig11775:5727..5865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 5728..5865 -
1622928886.0783458-CDS-H-paniculata_contig11775:6459..65641622928886.0783458-CDS-H-paniculata_contig11775:6459..6564Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 6460..6564 -
1691480657.0429354-CDS-H-paniculata_contig11775:6459..65641691480657.0429354-CDS-H-paniculata_contig11775:6459..6564Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 6460..6564 -
1622928886.0881674-CDS-H-paniculata_contig11775:7724..78951622928886.0881674-CDS-H-paniculata_contig11775:7724..7895Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 7725..7895 -
1691480657.051211-CDS-H-paniculata_contig11775:7724..78951691480657.051211-CDS-H-paniculata_contig11775:7724..7895Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11775 7725..7895 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928886.09827-UTR-H-paniculata_contig11775:7895..78981622928886.09827-UTR-H-paniculata_contig11775:7895..7898Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11775 7896..7898 -
1691480657.0682805-UTR-H-paniculata_contig11775:7895..78981691480657.0682805-UTR-H-paniculata_contig11775:7895..7898Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11775 7896..7898 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11775.1134.1prot_H-paniculata_contig11775.1134.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11775 3622..7895 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11775.1134.1

>prot_H-paniculata_contig11775.1134.1 ID=prot_H-paniculata_contig11775.1134.1|Name=mRNA_H-paniculata_contig11775.1134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp
MVVTGMPGVKQPDARSGNKMLSPEDCTSLIEAFTEEQIENHVRSLDTGLH
LSQDRIQAAATAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDL
GTIAKKLAKDGSGGYTDHNEFAADVQLVFDNAMKYNGSESEVYPVANKMK
KDFKKDWAQAMKRMEDEEQRRKERGETCNLCGYMAKTFEPMTYYCNGAQC
NGKRIARGRYFYHASQSTQWHWCSSCYNDLKEGDIIAIAETAVRKADLKR
KRNDEQAEV*
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mRNA from alignment at H-paniculata_contig11775:3622..7898-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11775.1134.1 ID=mRNA_H-paniculata_contig11775.1134.1|Name=mRNA_H-paniculata_contig11775.1134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4277bp|location=Sequence derived from alignment at H-paniculata_contig11775:3622..7898- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATGGTTGTGACTGGGATGCCAGGGGTGAAGCAACCCGATGCTCGATC AGGCAACAAGATGCTCTCGCCAGAAGATTGTACGTCTTTGATCGAGGCGT TTACGGAGGAGCAGATCGAGAATCATGTCAGGTCGCTCGATACCGGCTTG CACCTCAGTCAGGATCGCATTCAGGTTAGTTTAGAGATTAGGTTGTGTTT GCTTAGGAGGTAATCGACTGCTCGAGACAACAACATTGCGTTTTCGTTTG ACGCGCAAATGAATTGTCAACAACTGTATACGCTACTGTAGCAGTAGCAA GCACTCTAGAAAAAACACAGAGCGCTTATGTACGTCGGCGGGTTTTGTGC CTCATTTTATGTTGTGTCTGGATACGTTTATTGCCCACACGGACTGTTAG AAAGGTCCATGTACCACGCCTCTAACGCCGTTTCAACCAACTCTTGGCGT GCTCTCTGTTAAGTGGTGTCATCGGCCTTCCCCCCCCCCCCCCCCCCCCC CCCACGTGACCGGCAGGCACAAGGCCTGACAAACCCAGAACCAATCGTGA ACCGATTCTTGGGTTGTCCACTAGTAAAAGTGTTGTGCGTAACGTCCAAG TAGGAAGTCCCAAGGATTTTCGTTCCTCCCTTCCATTTATTCAGTTTGTC GATGAGTAAACTAGGAACTTGAAGACCCCCCCCCCCCTCGGATGAATACG ACAATATGAAGGGTATATTGGCGTAAATCGTCAAAAATATATGTATTCGC CCAAAGGTAAAGCATGAGCACATTTAGTTCATAAATATTTATGTACTTCT CCACGACCATCTATCTATTTACAATTGCTTCGAATCATATGTAGTAGAAT GAGTAAGTCGTAATAGTGAAACATTTTCTCATTTATGCTGGAACATTCTG AAGCTTGGGCGAACCGTTTTTTTTGTTTTTTTTTCCAGTTTCGTCGCGAG TGTTGAATTTGTTCTTATGCGTGCGTGGAGGTGTACTCGTGTTGTATTCC AATAGTCGTCAAACCATTGACCATGTATCATCGGGAGGACGGAGTTGTAT CGTGTTATCAGCTATCAGAGCCATCGCCGATGGCCAATTGCTCTTTTTTA CCTTCCTAAATGTAGCTCAAAAGTCCGTCTCTGAGAGTGTAATAGTATGT TGAACAGTTACATATATATATATATATATATATATAATAAAATGAGAAGA ATATATTGACGCGAACTGAACAACCGTTTTCCTGGAAACTTGCTGCTCTC CTTGGACTCGTACTGTGCTTGCTACGTACTGTCATGTATGTTCGGGGGGG GGGGGGGATTGGTATACACGTGTGCTGGTTGCAGGCGGCGGCCACTGCTG TGCTGACAAAGCTTCGCGACTCCCAATTTGGTTGGGTTTTCAACGATCCT GTGGACCCTGTGCACCTCAATCTGCCGGATTATTTTGAGGTAACTTGGAA AAAAAAATGAAAAGTGAAGCATTTTATGAGATCGCAATCTTGTTGTTGTC TCAATCGTTTTTTTTCTTCTCCCATCTGATTTATAATCGCAAGAGTGGTT GGTTTTGTTGTGTCATGTTGTACTCTTAATCTAATCTCTCTCTCTCTCTC TCTATCTATCTATCTACCTATATAATATATATTCGATAAAACGCAAAACA AACGCAGCAAAAATTCACATCAGGTTCGTTCAGCATTCGTTGCAAGCTGA CTTTGTAGTGTTATTTTCAGTCTCGAGATGTTCAAATCTCTCAACACTTT TTTACCCGCTTTTTTTATCTGTCTTGATTGACTGCACCTGTTCTTCCAGA GCTTATATATAAGTGTACCTTATTCAGACCATCTTGATAAATGTCAATAA ACAGCAGCGATTTGTTGAAGCAGCAAAGGTTCAGTTTCAATTCCTCCCCG CAGTCCCAAAAAAGAAGGAAGTTTTTCAATTGGTTTGGTATGGTCCCCCA ACCCAGCGAAATCCAGCCTAACCCATGATAACTGAAGTCATGACCCCTTC CTCGCTTCCCCTGTTTCCTGATCTTGTGGACAGATCATCACGCATCCGAT GGATTTGGGTACGATAGCGAAAAAGCTGGCTAAGGACGGTTCTGGGGGTT ACACCGACCACAACGAATTCGCCGCGGATGTGCAGCTGGTTTTCGACAAT GCGATGAAGTACAATGGATCTGTGAGTGTCTTTTGGGGGGTAAGGGGGGG TAGAAACATTGCAAAGCTCAGCATTTTCAAGCTACTTGAATGCTTATTTC GTCTTCATCCAGAAACTGACCAAACAATTGGGGAGACTTTTTTTTTTTTT ACCCTCGAAAAGCTGAGGCAAAAATTGGAAGACGAATGATTTGATGTATG TATGCCCTTGACTTACTTGCAAATTTTCATGAACTTTGGCAACAATAAAA TTGCTTTTTATGAAGGTGTGAGGCATGAGGGGGTTCAATGCTCGGTATTA ACTCGACGGTTTTTGGAAGATCGTTCTCGTCACGTGGTATCCTCGTTTTG TCTTGAGTCAAGTTCCAAAAAATCAGCGGGGGCTTTGATCGACCTTTGAT CTGCGCGTGCGTTGCATGATGGATTCTGATTCAATTTTATTGTACAGGAG AGCGAGGTGTACCCAGTTGCGAATAAAATGAAGAAGGACTTCAAGAAGGA TTGGGCGCAGGTAAGAAAACTTCAAGAAAGCATAGGAAATGGGTCAGTTT AATCGGAGAGTGAAGAGTACAAATACTCTTGTTGGGAATAAAAAGAAACA TGAAATAGTAAACACTAATTTTAATCCGTCCATAACACGAACGAACAAAA ACAGATCGAAATCAGCGTTGTTTCCAGATATTAGACGAAGTATAAATGAA ACCATTATTTCATCACAAGTGTTTTTTTCTTCTTTTTTTTTCCCGTGGTT TCATTGGTTGGTTCATCTCTACATTTTTTTTTTTACTTACGTGGCTTTTG AGATGCGAGCTACAAGAAACACTAGTAAAACCAATTCCGTTCAAAAGTTA GGCCCCTTCCCCTGCACACACAGACACTCGCACACTTGTCATGGGTACCC CTCTTGCCTCTTCCCTCCCCTCCCCTCCCTCTCGTTTGTTCTAATAATTG CAGGGTTCTTGACGTCACACAATGTCACACATTTTACCTCAGTTATTGTG TGACGTTTTGTGACGTCAAGAGCCTTGAGTTTTTGCGATGGGAAAATATG AAGTGTTTGATTTTGTTGATTTTGTATGGGCTAAATAATGATCCGAATAT GAGTTACAATATACTGTACCGTACTGTAATATAATAAAATCCTATCTTTC CTCTCCTGCCAGGTCCCCCCATCCTGTTAACGACTATTTTTATTCGTTGT GTTATTTACTACTGTGATGTTGAACTATTGATATATCTAGGCGATGAAGA GGATGGAGGACGAGGAGCAACGACGCAAGGAGCGCGGTGAGACATGCAAC CTTTGCGGGTATATGGCGAAGACTTTTGAGCCCATGACGTACTACTGCAA CGGCGCGCAGTGCAACGGGAAGAGGATTGCGCGCGGGCGATACTTTTACC ACGCCTCTCAGTCGACACAGTGGCATTGGTGCTCGGTAAGTATTAGATGG CACGGTACACGCGGTGGTGCTCATATGTGTGTGTAGTTGTGTTCGAATTT CTTCGCATGTGTTTTTGTCATGATTCAATCTTGTTTGGTTTTTGTTTTCT TTCCACATCCCGTTACTATTATGATTCAATGTAAGTTAATGTTATTGGTG TTCCGAATTTTGGGCCTAAACACACTACATATGAAAAAGAAGGTCTTTCC TCGTGATCGCGGGTCTCAGCGGGCGGGTCTCAGCGACTGGGTCGAAGTGG TTGGGAAAAAATATTCGGCGATGGTGGTCGGGGTGGTCGTGGCGGTTATG GTGCCGTTACCGTTGTCATTGTCATTGTTGATGTCGATGTTTTGTGCGTT TTGATTGCCTCATGAAATTCTGGTTGATTTGAAAGGCGCCCGAAATGCCA CACGAAGTCTGGTGTTTTGAATATAATGGACATGCAAGCCGCCCACACGC CGACCCTGCCGCAACTAAAGTCAACGATACTTTACAATGTCGCTGCTGCG CTCGCTCGCGTGGTCCCTGGGGCCGATGCTGCTGGTATTGCTGCCTTGCC ATATTCATTACTGCTGCAGAGCTGTTATAACGACCTGAAAGAAGGAGACA TCATCGCCATCGCGGAAACGGCGGTGCGAAAGGCTGATCTCAAACGGAAG AGAAATGATGAGCAAGCGGAGGTATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig11775:3622..7898-

>mRNA_H-paniculata_contig11775.1134.1 ID=mRNA_H-paniculata_contig11775.1134.1|Name=mRNA_H-paniculata_contig11775.1134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig11775:3622..7898- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGTGACTGGGATGCCAGGGGTGAAGCAACCCGATGCTCGATCAGG
CAACAAGATGCTCTCGCCAGAAGATTGTACGTCTTTGATCGAGGCGTTTA
CGGAGGAGCAGATCGAGAATCATGTCAGGTCGCTCGATACCGGCTTGCAC
CTCAGTCAGGATCGCATTCAGATGGTTGTGACTGGGATGCCAGGGGTGAA
GCAACCCGATGCTCGATCAGGCAACAAGATGCTCTCGCCAGAAGATTGTA
CGTCTTTGATCGAGGCGTTTACGGAGGAGCAGATCGAGAATCATGTCAGG
TCGCTCGATACCGGCTTGCACCTCAGTCAGGATCGCATTCAGGCGGCGGC
CACTGCTGTGCTGACAAAGCTTCGCGACTCCCAATTTGGTTGGGTTTTCA
ACGATCCTGTGGACCCTGTGCACCTCAATCTGCCGGATTATTTTGAGGCG
GCGGCCACTGCTGTGCTGACAAAGCTTCGCGACTCCCAATTTGGTTGGGT
TTTCAACGATCCTGTGGACCCTGTGCACCTCAATCTGCCGGATTATTTTG
AGATCATCACGCATCCGATGGATTTGGGTACGATAGCGAAAAAGCTGGCT
AAGGACGGTTCTGGGGGTTACACCGACCACAACGAATTCGCCGCGGATGT
GCAGCTGGTTTTCGACAATGCGATGAAGTACAATGGATCTATCATCACGC
ATCCGATGGATTTGGGTACGATAGCGAAAAAGCTGGCTAAGGACGGTTCT
GGGGGTTACACCGACCACAACGAATTCGCCGCGGATGTGCAGCTGGTTTT
CGACAATGCGATGAAGTACAATGGATCTGAGAGCGAGGTGTACCCAGTTG
CGAATAAAATGAAGAAGGACTTCAAGAAGGATTGGGCGCAGGAGAGCGAG
GTGTACCCAGTTGCGAATAAAATGAAGAAGGACTTCAAGAAGGATTGGGC
GCAGGCGATGAAGAGGATGGAGGACGAGGAGCAACGACGCAAGGAGCGCG
GTGAGACATGCAACCTTTGCGGGTATATGGCGAAGACTTTTGAGCCCATG
ACGTACTACTGCAACGGCGCGCAGTGCAACGGGAAGAGGATTGCGCGCGG
GCGATACTTTTACCACGCCTCTCAGTCGACACAGTGGCATTGGTGCTCGG
CGATGAAGAGGATGGAGGACGAGGAGCAACGACGCAAGGAGCGCGGTGAG
ACATGCAACCTTTGCGGGTATATGGCGAAGACTTTTGAGCCCATGACGTA
CTACTGCAACGGCGCGCAGTGCAACGGGAAGAGGATTGCGCGCGGGCGAT
ACTTTTACCACGCCTCTCAGTCGACACAGTGGCATTGGTGCTCGAGCTGT
TATAACGACCTGAAAGAAGGAGACATCATCGCCATCGCGGAAACGGCGGT
GCGAAAGGCTGATCTCAAACGGAAGAGAAATGATGAGCAAGCGGAGGTAT
GAAGCTGTTATAACGACCTGAAAGAAGGAGACATCATCGCCATCGCGGAA
ACGGCGGTGCGAAAGGCTGATCTCAAACGGAAGAGAAATGATGAGCAAGC
GGAGGTATGA
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