mRNA_H-paniculata_contig4508.11340.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: D8LLE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE8_ECTSI) HSP 1 Score: 256 bits (653), Expect = 8.180e-78 Identity = 135/200 (67.50%), Postives = 155/200 (77.50%), Query Frame = 2
Query: 236 IVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSYTTTIYACAVLGHALAMPLVGLLQFT--LCLRGCAVFGCLLVSLATLASSLATSVGGLAALNTVFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDRATGLYSEEIAGRVPGMYLILGSCYLVLGMLGSRMLSPPP 829
I+GG+LLHL LGTLYSWGC+QPYVTSY+RL P+VT T+ ++A A LGH+L P VGLLQ L LRG AV G LV+L TLASS+ATSV LA+LN V GVG+AFAYTCPLV GY MPDRKG VSG +VAGFGAGAAVF+ VAT VNP N PD ATG Y EE+AGRVP MY+ILGSCYL LG+ GS M++ PP
Sbjct: 9 IIGGVLLHLALGTLYSWGCVQPYVTSYIRLHDPTVTIQDTSIVFAFAGLGHSLTSPFVGLLQDKKRLGLRGTAVVGASLVALTTLASSMATSVFELASLNAVLGVGVAFAYTCPLVSGYALMPDRKGTVSGFVVAGFGAGAAVFDAVATAVVNPSNTPPDPATGYYGEEVAGRVPSMYMILGSCYLTLGLFGSWMIANPP 208
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: A0A6H5KJW3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW3_9PHAE) HSP 1 Score: 151 bits (381), Expect = 2.360e-42 Identity = 88/139 (63.31%), Postives = 101/139 (72.66%), Query Frame = 2
Query: 323 LFHPSVTTSYTTTIYACAVLGHALAMPLVGLLQFT--LCLRGCAVFGCLLVSLATLASSLATSVGGLAALNTVFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDRATGLYSE 733
L +P+VT T+ ++A A LGH+L P VG LQ L L+G AV G LV+LATLASS+ATSV LA+LN V GVG+AFAYTCPLV GY MPDRKG VSG +VAGFGAGAAVF+ VAT VNP N PD ATG Y E
Sbjct: 6 LHNPTVTIQDTSIVFAFAGLGHSLTSPFVGFLQDKKRLGLQGTAVVGASLVALATLASSMATSVFELASLNAVLGVGVAFAYTCPLVSGYALMPDRKGTVSGFVVAGFGAGAAVFDAVATAVVNPSNTPPDPATGYYGE 144
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: A0A7M7NKU4_STRPU (MFS domain-containing protein n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NKU4_STRPU) HSP 1 Score: 150 bits (380), Expect = 1.010e-38 Identity = 85/215 (39.53%), Postives = 130/215 (60.47%), Query Frame = 2
Query: 221 RATTAIVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSY--TTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASSLATSVGGLAALNT---VFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASP------DRATGLYSEE-IAGRVPGMYLILGSCYLVLGMLGSRMLSPPP 829
R A+ GG+L+HLTLGT+YS+G + PY+TSY+R + T SY ++ ++A + G +M L G ++ L R + GCLLVS + S+L+ V L T +FG+G+ AY PLVC W+P++KG+V+G++VAGFG GA +FN + TG++NP N SP D Y ++ I +VP +++ G YLV+ ++G +L PP
Sbjct: 8 RGWLAVTGGVLVHLTLGTIYSYGNMAPYMTSYIRKYSTPATLSYQESSFVFALMLFGQGTSMVLGGYIESRLGPRITTLIGCLLVSAGMMLSALSIKVSFFLLLLTYGLIFGLGVGIAYVPPLVCAMKWLPEKKGLVNGLVVAGFGGGAFIFNQIQTGYLNPHNLSPNVTDPQDHTAKFYDQDSILDKVPTSFVLQGGIYLVIQIVGVLLLKDPP 222
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: A0A7S4DKP8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKP8_HETAK) HSP 1 Score: 147 bits (371), Expect = 2.450e-37 Identity = 92/203 (45.32%), Postives = 119/203 (58.62%), Query Frame = 2
Query: 236 IVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSYTTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASSLATSVGGLAALNTV-FGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDR--ATG--LYSEEIAGRVPGMYLILGSCYLVLGMLGSRMLSPPP 829
++GG + L LGTLY WG + Y+TSYLR +P +T S T +Y + AL M G+++ L A G ++S + SSLA S+ AL V FG+G+A AY CPL CG+ WMP KG+VSG IV+GFG GA VFN VAT NPE+A+ A G Y ++ RVP M LG CY VL +LGS +L PP
Sbjct: 17 LIGGFAIQLVLGTLYCWGNLTTYITSYLRQLNPELTYSDTLLVYVSIIGTQALTMWAGGIVEEKLGPGLTAFLGGSILSGGIIFSSLARSLWAFIALYGVCFGLGLALAYPCPLSCGFQWMPRHKGLVSGFIVSGFGGGAFVFNQVATRLANPEDATASEVGADGRLYYGPDVTDRVPAMLRALGGCYFVLVLLGSLVLRDPP 219
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: UPI001BB27D8D (oxalate:formate antiporter-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB27D8D) HSP 1 Score: 145 bits (365), Expect = 1.450e-36 Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 2
Query: 221 RATTAIVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSY--TTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASSLATSVGGLAALNT---VFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASP------DRATGLYSEE-IAGRVPGMYLILGSCYLVLGMLGSRMLSPPP 829
R A+ GG+L+HLT+GT+YS+G + PY+TSY+R + T SY ++ I+A + G +M + G ++ L R + GCLLVS+ + S+L+ V L T +FG+G+ AY PLVC W+P++KG+V+G++VAGFG GA +FN + TG++NP N P D Y ++ I +VP Y++ G YL + ++G +L PP
Sbjct: 8 RGWLAVTGGVLVHLTIGTIYSYGNMAPYMTSYIRKYSYPSTLSYQESSFIFALMLFGQGSSMFIGGYIEAKLGPRITTLIGCLLVSMGMMLSALSIRVSFFLLLLTYGLIFGLGVGIAYVPPLVCAMKWLPEKKGLVNGLVVAGFGGGAFIFNQIQTGYLNPHNLDPNVTDSQDHTAKYYDQDSILDKVPMSYVLQGGIYLAIQIVGVILLKDPP 222
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: W7TFT9_9STRA (Major facilitator superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFT9_9STRA) HSP 1 Score: 144 bits (363), Expect = 9.010e-36 Identity = 90/207 (43.48%), Postives = 123/207 (59.42%), Query Frame = 2
Query: 233 AIVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSYTTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFG-CLLVSLATLASSLATSVGGLAAL-NTVFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDRATGLYSEE-------IAGRVPGMYLILGSCYLVLGMLGSRMLSPP 826
AI+GG LLHL +GTLY++G + Y+TSYLR++ P+VT + T IYAC + G AL M L G ++ + R A G C LV A L SS+ TS+ + +FG G YT PLVCGY W P+RKG+VSGVI++GFG A VFN + + VNP N PD +Y + + VPG+ + LG Y +L + G+ +L P
Sbjct: 14 AILGGFLLHLVMGTLYTFGSLTVYLTSYLRVYDPTVTYNNTIVIYACTIAGQALLMFLGGKIELRVGPRAAAAIGSCCLVG-APLLSSMVTSLWAMTCTYGLLFGFGGGLTYTVPLVCGYRWEPERKGLVSGVILSGFGLSALVFNQIQSVLVNPHNLKPDV---VYKNKRYFGPGPVTDAVPGLLVKLGLLYSLLCVTGTLLLQDP 216
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: A0A0G4GAZ5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GAZ5_VITBC) HSP 1 Score: 142 bits (357), Expect = 1.230e-35 Identity = 86/219 (39.27%), Postives = 123/219 (56.16%), Query Frame = 2
Query: 221 RATTAIVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPS---VTTSYTTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASSLATSVGGLAALNTVF--GVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDRATGLYSEEIAG-----------RVPGMYLILGSCYLVLGMLGSRMLSPPP 829
+A + GG+L+H+TLGTLY+WG + YV S++R+ V T +++ G + MP G ++ + R +FGC+++S+ LA S L F G+GI AYT PLVC WMP++KG++SG+I AGFGAGA VFN V T +VNPE+ PD A Y+E G RVP ++ +L SCYLV+ ++G L PP
Sbjct: 10 QAWLVLAGGVLVHVTLGTLYTWGNLNAYVASHMRMEAEGLGWVRMKDTGWVFSALFSGQGIGMPFGGAIEKRIGPRWATLFGCVVMSIGVSLGQLAISSYPAFVLTYGFINGLGIGLAYTSPLVCALKWMPNKKGLISGIITAGFGAGALVFNPVQTMFVNPEDVRPDAAP--YAETNPGELYFSDKALLNRVPNLFTLLASCYLVVQLIGCAFLENPP 226
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: R7TFJ4_CAPTE (MFS domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TFJ4_CAPTE) HSP 1 Score: 142 bits (357), Expect = 1.990e-35 Identity = 83/217 (38.25%), Postives = 128/217 (58.99%), Query Frame = 2
Query: 224 ATTAIVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSYTTTIY--ACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASSLATSVG---GLAALNTVFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDR------ATGLYSEEIAG----RVPGMYLILGSCYLVLGMLGSRMLSPPP 829
A + I+GG+L+HLTLGT+Y++G + PY TSY+R + +YT++I+ A A G LAM G+L + R + G SL + + L V + +FG+GI AY PL W+P+RKG+V+G+++AGFG G+ +FN V T ++NP+N +PD+ T +S+E AG RVP +LILG+CY ++ +G ++ PPP
Sbjct: 23 AASVILGGVLVHLTLGTIYTFGNMNPYFTSYIRAYSSPRDLTYTSSIWVSAFAGAGQGLAMFAGGILASRIGPRWAVLLGSWTTSLGVVLTYLTIKVSLQLSVITYGAMFGLGIGIAYAPPLAVAMQWLPERKGLVNGIVLAGFGGGSFIFNQVQTAYINPDNLAPDQPGSPGSTTKYFSKEKAGDLLDRVPKTFLILGTCYALMQFIGVLLIRPPP 239
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: A0A7S4DPI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DPI3_9EUKA) HSP 1 Score: 141 bits (356), Expect = 2.090e-35 Identity = 77/197 (39.09%), Postives = 115/197 (58.38%), Query Frame = 2
Query: 239 VGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSYTTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASSLATSVGGLAALNT-VFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASPDRATGLYSEEIAGRVPGMYLILGSCYLVLGMLGSRMLSPP 826
+ G ++HL LGT+Y WG + PY+TSYLR++ PSVT S T ++ A++MPL G+++ L R A+ G ++ L S AT+ L + +FG G+ AY P+ CGY W+P RKG+VSG++VAGFG G A FN+V NP PD + ++A RVP M+ LG Y ++ +G+ ++ P
Sbjct: 47 LAGFMMHLCLGTMYCWGSLTPYITSYLRIYDPSVTYSDTIIVFMLTPAAMAISMPLGGIIEKRLGGRTTALLGSWIMCSGELLSVFATTTFQLVITHCFIFGFGMGVAYMNPIACGYRWLPKRKGLVSGIVVAGFGLGGAFFNLVGAMICNPNQEQPDP---YFEADVANRVPTMFATLGGMYFLMTTVGALLIRDP 240
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Match: A0A524EYH4_9ARCH (MFS transporter n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A524EYH4_9ARCH) HSP 1 Score: 140 bits (354), Expect = 2.590e-35 Identity = 75/205 (36.59%), Postives = 116/205 (56.59%), Query Frame = 2
Query: 236 IVGGILLHLTLGTLYSWGCIQPYVTSYLRLFHPSVTTSYTTTIYACAVLGHALAMPLVGLLQFTLCLRGCAVFGCLLVSLATLASS-LATSVGGLAALNTVFGVGIAFAYTCPLVCGYGWMPDRKGVVSGVIVAGFGAGAAVFNVVATGWVNPENASP------DRATGLYSEEIAGRVPGMYLILGSCYLVLGMLGSRMLSPPP 829
++G +L+ L LGT+YSWG + PY TSYL+ F+ ++ +T I+A + A+ M G LQ + G +L+SL + + + T G + +FG+GI F Y CP+ C W PD+KG+++G+ VAGFGAGA +FN++ ++NP N P D + I RVP ++L++G YLV+ GS +L PP
Sbjct: 13 VIGAVLIQLALGTIYSWGVLTPYFTSYLQAFNANIRYEHTQYIFAVGLFAFAVTMIFSGKLQQKYGPMLIGLVGAVLMSLGVILTIFMKTFAGAFISYGVLFGIGIGFGYVCPIACAAKWFPDKKGLINGIAVAGFGAGAFIFNLIIKAFINPSNLQPTFFNLIDEKLYFNNPAIIARVPWVFLLIGLIYLVMTAGGSLLLQNPP 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4508.11340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4508.11340.1 >prot_H-paniculata_contig4508.11340.1 ID=prot_H-paniculata_contig4508.11340.1|Name=mRNA_H-paniculata_contig4508.11340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp MVLGVMRSTRVATRRATTAIVGGILLHLTLGTLYSWGCIQPYVTSYLRLFback to top mRNA from alignment at H-paniculata_contig4508:4138..15622- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4508.11340.1 ID=mRNA_H-paniculata_contig4508.11340.1|Name=mRNA_H-paniculata_contig4508.11340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11485bp|location=Sequence derived from alignment at H-paniculata_contig4508:4138..15622- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4508:4138..15622- >mRNA_H-paniculata_contig4508.11340.1 ID=mRNA_H-paniculata_contig4508.11340.1|Name=mRNA_H-paniculata_contig4508.11340.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig4508:4138..15622- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |