mRNA_H-paniculata_contig45007.11327.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig45007.11327.1
Unique NamemRNA_H-paniculata_contig45007.11327.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A7S3H3P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3P7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.560e-25
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 
Query:   37 PSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            P+T  W+LGFY  FH++LN +AE+TRFGDRLFY+EWW+ R I EYWR WN+PVH+W
Sbjct:    1 PNTYVWLLGFYFFFHLWLNFLAEITRFGDRLFYKEWWNARTIDEYWRTWNMPVHHW 56
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A7S2CUJ8_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CUJ8_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.220e-24
Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            +L++ +P T  W+LGFY+IFH+FLNLMAE+ RFGDR+FY++WW+     +YWRLWNLPVH W
Sbjct:   50 LLKLTVPVTYIWLLGFYLIFHLFLNLMAEILRFGDRIFYKDWWNATTFDQYWRLWNLPVHYW 111
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A2K3E7S4_CHLRE (Diacylglycerol O-acyltransferase n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7S4_CHLRE)

HSP 1 Score: 101 bits (252), Expect = 5.990e-24
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            VL++ALPST  W+LGFY +FH++LN++AE+TRFGDR FY++WW+   + EYW+LWN+PVH W
Sbjct:  156 VLKLALPSTYAWLLGFYCLFHLWLNVLAELTRFGDREFYKDWWNAATVGEYWKLWNMPVHKW 217
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: W7TT63_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT63_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.610e-24
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHN 201
            +LR+A+PST  W++ FYV FH  LNL AE+TRFGDRLF+++WW+C   + YWR WNLPVH 
Sbjct:   16 LLRLAIPSTFVWLITFYVYFHCTLNLFAEITRFGDRLFFKDWWNCTSFSRYWRTWNLPVHQ 76
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A835VPN8_CHLIN (Diacylglycerol O-acyltransferase n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VPN8_CHLIN)

HSP 1 Score: 101 bits (252), Expect = 1.530e-23
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            VL++ALPST  W+LGFY +FH++LN++AE+TRFGDR FY++WW+   + EYW+LWN+PVH W
Sbjct:  661 VLKLALPSTYAWLLGFYCLFHLWLNVLAELTRFGDREFYKDWWNAATVGEYWKLWNMPVHKW 722
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A835WJ54_9CHLO (Diacylglycerol O-acyltransferase n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WJ54_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 1.530e-23
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            VL++ALPST  W+LGFY +FH++LN++AE+TRFGDR FY++WW+   + EYW+LWN+PVH W
Sbjct:  682 VLKLALPSTYAWLLGFYCLFHLWLNVLAELTRFGDREFYKDWWNAATVGEYWKLWNMPVHKW 743
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: I2CPZ8_NANGC (Diacylglycerol O-acyltransferase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPZ8_NANGC)

HSP 1 Score: 95.9 bits (237), Expect = 2.180e-23
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHN 201
            +LR+A+PST  W++ FYV FH  LNL AE+TRFGDRLF+++WW+C   + YWR WNLPVH 
Sbjct:   16 LLRLAIPSTFVWLITFYVYFHCTLNLFAEITRFGDRLFFKDWWNCTSFSRYWRTWNLPVHQ 76
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: D8LSK0_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK0_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.140e-23
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            +L +A+P+T  W+LGFY  FH+ LNL+AEV RFGDRLFYR+WW+   I  YWRLWNLPVH W
Sbjct:  228 LLTLAVPNTYVWLLGFYAFFHLTLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYW 289
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A150GZF5_GONPE (Diacylglycerol O-acyltransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZF5_GONPE)

HSP 1 Score: 99.0 bits (245), Expect = 1.350e-22
Identity = 37/62 (59.68%), Postives = 53/62 (85.48%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            VL++ALPST  W+LGFY +FH++LN++AE+T+FGDR FY++WW+   + EYW+LWN+PVH W
Sbjct:  654 VLKLALPSTYAWLLGFYGLFHLWLNVLAELTQFGDREFYKDWWNAGTVGEYWKLWNMPVHKW 715
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BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Match: A0A835Y0J1_9CHLO (Diacylglycerol O-acyltransferase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0J1_9CHLO)

HSP 1 Score: 99.0 bits (245), Expect = 1.350e-22
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 1 
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNW 204
            VL++ALPST  W+LGF+ +FH +LN++AE+TRFGDR FY++WW+   + +YW+LWN+PVH W
Sbjct:  595 VLKLALPSTYAWLLGFFCLFHAWLNILAELTRFGDREFYKDWWNAATVGDYWKLWNMPVHKW 656
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45007.11327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3H3P7_9STRA1.560e-2566.07Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2CUJ8_9STRA3.220e-2461.29Diacylglycerol O-acyltransferase n=1 Tax=Dictyocha... [more]
A0A2K3E7S4_CHLRE5.990e-2461.29Diacylglycerol O-acyltransferase n=1 Tax=Chlamydom... [more]
W7TT63_9STRA9.610e-2460.66Diacylglycerol O-acyltransferase n=1 Tax=Nannochlo... [more]
A0A835VPN8_CHLIN1.530e-2361.29Diacylglycerol O-acyltransferase n=1 Tax=Chlamydom... [more]
A0A835WJ54_9CHLO1.530e-2361.29Diacylglycerol O-acyltransferase n=1 Tax=Chlamydom... [more]
I2CPZ8_NANGC2.180e-2360.66Diacylglycerol O-acyltransferase (Fragment) n=1 Ta... [more]
D8LSK0_ECTSI4.140e-2364.52Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpu... [more]
A0A150GZF5_GONPE1.350e-2259.68Diacylglycerol O-acyltransferase n=1 Tax=Gonium pe... [more]
A0A835Y0J1_9CHLO1.350e-2258.06Diacylglycerol O-acyltransferase n=1 Tax=Edaphochl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45007contigH-paniculata_contig45007:1..615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.1
Seed ortholog evalue3.5e-18
Seed eggNOG ortholog35128.Thaps261279
Preferred nameDGAT1
KEGG rclassRC00004,RC00041
KEGG koko:K00635,ko:K11155
KEGG ReactionR02251,R02366,R02367,R08381
KEGG Pathwayko00561,ko00830,ko01100,ko04975,map00561,map00830,map01100,map04975
KEGG ModuleM00089
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0001101,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002790,GO:0003006,GO:0003674,GO:0003824,GO:0003846,GO:0004144,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005886,GO:0005975,GO:0006091,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006662,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006970,GO:0006996,GO:0007154,GO:0007267,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008374,GO:0008610,GO:0008611,GO:0009058,GO:0009117,GO:0009150,GO:0009259,GO:0009266,GO:0009306,GO:0009409,GO:0009507,GO:0009526,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009891,GO:0009893,GO:0009914,GO:0009941,GO:0009987,GO:0010029,GO:0010030,GO:0010033,GO:0010154,GO:0010565,GO:0010817,GO:0010866,GO:0010867,GO:0010876,GO:0010883,GO:0010888,GO:0010941,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018904,GO:0019216,GO:0019217,GO:0019222,GO:0019432,GO:0019637,GO:0019693,GO:0019747,GO:0019915,GO:0019992,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030072,GO:0030073,GO:0030141,GO:0030656,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031406,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032368,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033036,GO:0033293,GO:0033865,GO:0033875,GO:0033993,GO:0034032,GO:0034284,GO:0034377,GO:0034379,GO:0034389,GO:0034641,GO:0034698,GO:0035336,GO:0035337,GO:0035383,GO:0035579,GO:0036094,GO:0036155,GO:0036230,GO:0042119,GO:0042175,GO:0042221,GO:0042581,GO:0042592,GO:0042886,GO:0042981,GO:0043062,GO:0043067,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043299,GO:0043312,GO:0043603,GO:0043900,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044752,GO:0045017,GO:0045055,GO:0045184,GO:0045321,GO:0045477,GO:0045595,GO:0045834,GO:0045923,GO:0045995,GO:0046320,GO:0046321,GO:0046339,GO:0046460,GO:0046463,GO:0046483,GO:0046485,GO:0046486,GO:0046504,GO:0046879,GO:0046889,GO:0046890,GO:0046903,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048580,GO:0048582,GO:0048608,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050801,GO:0050865,GO:0050867,GO:0050896,GO:0051049,GO:0051094,GO:0051179,GO:0051186,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0055081,GO:0055086,GO:0055088,GO:0055089,GO:0060259,GO:0060284,GO:0061458,GO:0062012,GO:0062013,GO:0065003,GO:0065005,GO:0065007,GO:0065008,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071825,GO:0071827,GO:0071840,GO:0071944,GO:0072521,GO:0080090,GO:0090207,GO:0090208,GO:0097006,GO:0097305,GO:0097384,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:0099503,GO:0140042,GO:1900140,GO:1901135,GO:1901360,GO:1901503,GO:1901564,GO:1901568,GO:1901576,GO:1901700,GO:1901738,GO:1902224,GO:1903998,GO:1904478,GO:1904729,GO:1904748,GO:1905879,GO:1905952,GO:1905953,GO:2000026,GO:2000241,GO:2000489,GO:2000491
EggNOG free text desc.Belongs to the membrane-bound acyltransferase family
EggNOG OGs2XD8R@2836,COG5056@1,KOG0380@2759
EC2.3.1.20,2.3.1.75,2.3.1.76
COG Functional cat.I
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size204
Cds size204
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930351.4688284-CDS-H-paniculata_contig45007:0..991622930351.4688284-CDS-H-paniculata_contig45007:0..99Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45007 1..99 -
1691481253.3613014-CDS-H-paniculata_contig45007:0..991691481253.3613014-CDS-H-paniculata_contig45007:0..99Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45007 1..99 -
1622930351.4817138-CDS-H-paniculata_contig45007:510..6151622930351.4817138-CDS-H-paniculata_contig45007:510..615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45007 511..615 -
1691481253.3761542-CDS-H-paniculata_contig45007:510..6151691481253.3761542-CDS-H-paniculata_contig45007:510..615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig45007 511..615 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45007.11327.1prot_H-paniculata_contig45007.11327.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig45007 1..615 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig45007.11327.1

>prot_H-paniculata_contig45007.11327.1 ID=prot_H-paniculata_contig45007.11327.1|Name=mRNA_H-paniculata_contig45007.11327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MPNLFYVLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWD
CRDIAEYWRLWNLPVHNW
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mRNA from alignment at H-paniculata_contig45007:1..615-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig45007.11327.1 ID=mRNA_H-paniculata_contig45007.11327.1|Name=mRNA_H-paniculata_contig45007.11327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=615bp|location=Sequence derived from alignment at H-paniculata_contig45007:1..615- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAATCTGTTCTACGTGCTGAGGGTGGCACTGCCCAGCACGGGGAC
TTGGGTGCTTGGTTTCTACGTCATTTTCCACGTTTTTCTCAACCTCATGG
CTGAGGTATAGTATAATCTGTCTATACACGAGTAATATCTTGTTGCCTTT
TCCGGAAGCTGCATCCGAGTCTGCACATAATCGGAAACAAGGTAATTTAC
TACCTGAGCTATTCCCTAATGCACTGACGTGATGATGATGATGGTGATGA
TGATGATGGTGATGATGATGATGATGATGCTGTTGGTGGGTGACGTTGTT
GTTAGTGGTGGTGGTAGTCTGGGGGGCGAATAAGTTATATGAGCTATTGA
CCTGCCTACAGGTAGCACAGGGTCTGAGGCCACTAGCCCACTGGCCTACG
AGTGGGTGTATATATATGTATACTCTGATATTCTTATATTACGCCCCATC
ACCCATACGTTATCGACGGGACTCTGTTCAATCGTGTTATCGTACGCTCG
TTCTTTTCTTCTCAAGGTCACAAGGTTCGGGGACCGTTTATTCTACCGAG
AGTGGTGGGACTGCAGAGATATCGCTGAATATTGGCGCCTCTGGAACCTC
CCAGTTCACAATTGG
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Coding sequence (CDS) from alignment at H-paniculata_contig45007:1..615-

>mRNA_H-paniculata_contig45007.11327.1 ID=mRNA_H-paniculata_contig45007.11327.1|Name=mRNA_H-paniculata_contig45007.11327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at H-paniculata_contig45007:1..615- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAATCTGTTCTACGTGCTGAGGGTGGCACTGCCCAGCACGGGGAC
TTGGGTGCTTGGTTTCTACGTCATTTTCCACGTTTTTCTCAACCTCATGG
CTGAGATGCCCAATCTGTTCTACGTGCTGAGGGTGGCACTGCCCAGCACG
GGGACTTGGGTGCTTGGTTTCTACGTCATTTTCCACGTTTTTCTCAACCT
CATGGCTGAGGTCACAAGGTTCGGGGACCGTTTATTCTACCGAGAGTGGT
GGGACTGCAGAGATATCGCTGAATATTGGCGCCTCTGGAACCTCCCAGTT
CACAATTGGGTCACAAGGTTCGGGGACCGTTTATTCTACCGAGAGTGGTG
GGACTGCAGAGATATCGCTGAATATTGGCGCCTCTGGAACCTCCCAGTTC
ACAATTGG
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