prot_H-paniculata_contig450.11325.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig450.11325.1
Unique Nameprot_H-paniculata_contig450.11325.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length618
Homology
BLAST of mRNA_H-paniculata_contig450.11325.1 vs. uniprot
Match: A0A6H5KE74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE74_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 1.020e-147
Identity = 323/661 (48.87%), Postives = 394/661 (59.61%), Query Frame = 0
Query:   23 RVVARQRAATRAQLVANLRNAAQGLATLQAKVVGEESRXXXXXXXXXQGPSSSISSPS-LSGNAHVPLLGGDTPEAIEVCSALEQCLFHRIRTKDFRGVMPFWAYLERLERLPIATAAGA--RPGPRERRLSSVRNTVGAVASCRRVSTAVGKARSWVRQCLVCKCLEACVGAVLAETRLVQVFYEPTALARCEEGSTILLRLCAALEAFDIAVDADQSALDSAPRWPILEREEEWDRRMDED--------------QARPAT-----VTAA------------SQQPLYNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVATATSEIDKLSQGESWAQLDGVISSFSSKVDQAVQSLDGTLSELFGDKDIFGDNNSNGDSKNYNEGGRNLHRSVPASQTPLYTANSSGXXXXXSIGNADRRQAGGVRDDAGWVEIRGDTLNATSSPSLTDARYR-------------HHLHSSAQGHSTAS---------FPGGDAGLGRQG-RKGKGRVFGVPLDQLVLDPERCNKGLLDPALGVPDAVANLMEALSEPTCYNTPGIFLEESSESELFRVVKSLEKTNQVPIAAIGG--------PAWLISKITGGAXXXXXXXXXXXXKAGGVSPHALASALLFFLHRLPEPLLTFRRREAFLSCE 618
            R +  QRAATRA+LV NLRNAAQ LA LQAK    + +          G    +S    +      PL+GGDT EA+ +C A+EQCLFHRIR KDF GV+PFWA+LER+ERLP+    G   RPGPRERRL+SVRNTVGAVAS   VST +G+AR+W+RQCLVCKCLE+CV A+L E RLV+VFYEPTALARC EGS ILLRLCAALEAFD+A+D DQSALD+ PRWPILE EEEWDR                    AR A+      T A            ++ P   +        XXXXXXXXXXXXX        W A+A SEID+L+ G    QLD V+++ SSKVD+AVQSLD T++++FGD D   DN+ N                                        A    +GG RD  GWVE+RG T  + S+    +   R              HL  S+    TA+         +PG     GR+G  KG+GRVFGVPL+ LVL+PERC +G LDPALGVPDAV +L+EALSE  C N+PG+FL E+ E+EL +VVKSL+K N +P    GG        PAWL+S++TGG              A GVSPHA+A+AL++FLHRLPEPLLTFRRREAFL+CE
Sbjct:   48 RTLVLQRAATRAKLVKNLRNAAQALAALQAK----QQQEGVAPPQQAGGAMGMVSETGGIPPRQQPPLIGGDTAEAVALCVAIEQCLFHRIRVKDF-GVIPFWAFLERVERLPLTMGEGGAGRPGPRERRLASVRNTVGAVASLSNVSTPLGRARAWIRQCLVCKCLESCVAALLEEDRLVKVFYEPTALARCREGSIILLRLCAALEAFDVAIDTDQSALDTPPRWPILEEEEEWDRLAXXXXXXXXXXXXXXXGTHARTASRSFDETTVAGGAMGRSXXXXTARGPPAEHGSVSWFQEXXXXXXXXXXXXXGRRSDVGGWAASALSEIDQLANGNWNEQLDDVLATVSSKVDKAVQSLDETINDIFGDNDDV-DNDDN---------------------------------------KAKANSSGGTRD--GWVELRGGTAKSASALLHPEEAARDXXXXXXXXXTGDEHLAPSSWRKMTAAGGPRAGAGGYPGAFVMGGRRGGAKGRGRVFGVPLEDLVLNPERCRRGTLDPALGVPDAVLSLIEALSEEGCRNSPGLFLREADETELVKVVKSLDKANTLPGRRGGGRSGDSSSSPAWLVSRLTGGGEGTAEEEKSGGKGALGVSPHAVANALVYFLHRLPEPLLTFRRREAFLACE 661          
BLAST of mRNA_H-paniculata_contig450.11325.1 vs. uniprot
Match: D8LHU4_ECTSI (Rap2 interacting protein x isoform 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU4_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 3.860e-141
Identity = 325/691 (47.03%), Postives = 393/691 (56.87%), Query Frame = 0
Query:    1 MSWISSIIPSGAGQERRNNGISRVVARQRAATRAQLVANLRNAAQGLATLQAKVVGEESRXXXXXXXXXQGPSSSISSPS-LSGNAHVPLLGGDTPEAIEVCSALEQCLFHRIRTKDFRGVMPFWAYLERLERLPIATAAGA--RPGPRERRLSSVRNTVGAVASCRRVSTAVGKARSWVRQCLVCKCLEACVGAVLAETRLVQVFYEPTALARCEEGSTILLRLCAALEAFDIAVDADQSALDSAPRWPILE-----------------------------REEEWDRRMDED------QARPATVTAASQQPLYNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVATATSEIDKLSQGESWAQLDGVISSFSSKVDQAVQSLDGTLSELFGDKDIFGDNNSNGDSKNYNEGGRNLHRSVPASQTPLYTANSSGXXXXXSIGNADRRQAGGVRDDAGWVEIRGDTLNATSS------------------PSLTDARYRHHLHSSAQGHSTASFPGGDAG-------LG--RQGRKGKGRVFGVPLDQLVLDPERCNKGLLDPALGVPDAVANLMEALSEPTCYNTPGIFLEESSESELFRVVKSLEKTNQVPIAAIGG--------PAWLISKITGGAXXXXXXXXXXXXKAGGVSPHALASALLFFLHRLPEPLLTFRRREAFLSCE 618
            MSW+SSII SG  Q+ R++G  +V ARQRAATRA+LV NLRNAAQ LA LQAK    + +          G    +S    +      PL+GGDT EA+ +C A+EQCLFHRIR KDF GV+PFWA+LER+ERLP+    G   R GPRERRL+SVRNTVGAVAS   VST +G+AR+W+RQCLVCKCLE+CV A+L E RLV+VFYEPTALARC EGS ILLRLCAALEAFD+A+D DQSAL++ PRWPILE                             R        DE         R A    A   P  + S        XXXXXXXXXX          W A+A SEID+L+ G    QLD V+++ SSKVD+AVQSLD T+ ++FGD                                            XX          GG RD  GWVE+RG T  + S+                            HL SS+    TA+ P   AG       +G  R G KG+GRVFGVPL+ LVL+PERC +G LDPALGVPDAV +L+EALSE  C N+PG+FL E+ E+EL +VVKSL+K N +P    GG        PAWL+S++TGG              A GVSP A+A+AL++FLHRLPEPLLTFRRREAFL+CE
Sbjct:    1 MSWLSSII-SGP-QDSRDSG-KQVEARQRAATRARLVKNLRNAAQALAALQAK----QQQEGVAPPQQAGGAMGMVSETGGIPRRQQPPLIGGDTAEAVALCVAIEQCLFHRIRVKDF-GVIPFWAFLERVERLPLTIGGGGAGRQGPRERRLASVRNTVGAVASLSHVSTPLGRARAWIRQCLVCKCLESCVAALLEEDRLVKVFYEPTALARCREGSIILLRLCAALEAFDVAIDTDQSALNTPPRWPILEEXXXXXXXXXXXXXXXXXXXXXXXXXSGTRARTAPGSFDETAVAGGAMGRSAAAGTARVPPAEHGSVSWFQEQRXXXXXXXXXXAGRRSDMGG-WAASALSEIDQLANGNWNEQLDDVLATVSSKVDKAVQSLDETIQDIFGDDXXX----------------------------------------XXXXXXXXXXXXGGTRD--GWVELRGGTAKSASALLHPEEAXXXXXXXXXXXXXXXXXXXXEHLASSSGRKMTAAGPRAGAGGYPGAFVMGGRRGGAKGRGRVFGVPLEDLVLNPERCRRGTLDPALGVPDAVLSLIEALSEEGCRNSPGLFLREADETELVKVVKSLDKANTLPGRRGGGSSGSSASSPAWLVSRLTGGGEGTAEEEKSGGRGALGVSPQAVATALVYFLHRLPEPLLTFRRREAFLACE 640          
BLAST of mRNA_H-paniculata_contig450.11325.1 vs. uniprot
Match: A0A836CLX4_9STRA (TLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.040e-16
Identity = 55/140 (39.29%), Postives = 74/140 (52.86%), Query Frame = 0
Query:  478 VFGVPLDQLVLDPERCNKGLLDPALGVPDAVANLMEALSEPTCYNTPGIFLEESSESELFRVVKSLEKTNQVPIAAIGGPAWLISKITGGAXXXXXXXXXXXXKAGGVSPHALASALLFFLHRLPEPLLTFRRREAFLSC 617
            VFGV L++L   P R    +LD A  +PDA+A+L+ ALS P   + PG+F   ++  E+  V K+L   N VP+ A G                             VS HALA+ALL FLHR+P+PLLT++ R AFL C
Sbjct:  302 VFGVDLEELFCSPRRSAGAMLDAAAELPDALASLLAALSHPLVLSEPGLFQVAAAPGEVLTVTKALNAGNAVPVDAGGSSL--------------------------VSAHALAAALLLFLHRMPQPLLTYQSRRAFLVC 415          
BLAST of mRNA_H-paniculata_contig450.11325.1 vs. uniprot
Match: A0A7S1C9A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9A5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.720e-8
Identity = 45/141 (31.91%), Postives = 66/141 (46.81%), Query Frame = 0
Query:  477 RVFGVPLDQLVLDPERCNKGLLDPALGVPDAVANLMEALSEPTCYNTPGIFLEESSESELFRVVKSLEKTNQVPIAAIGGPAWLISKITGGAXXXXXXXXXXXXKAGGVSPHALASALLFFLHRLPEPLLTFRRREAFLSC 617
            RVFGV L  L +DPE     +LDP L VP+  +  +E L      NTPG+F    S++ +  + ++   T+ V +  +G  A                             HA+A+ L+ FL  LP+PLLT+ R  AF+SC
Sbjct:   69 RVFGVALASLAVDPEHSTLAVLDPRLAVPELPSQCIELLEAAA--NTPGLFTTRVSDATVASLREAFSATHTVHMV-VGVAA---------------------------DAHAVAALLMSFLAYLPDPLLTYERHVAFMSC 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig450.11325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KE74_9PHAE1.020e-14748.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU4_ECTSI3.860e-14147.03Rap2 interacting protein x isoform 3 n=1 Tax=Ectoc... [more]
A0A836CLX4_9STRA5.040e-1639.29TLD-domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S1C9A5_9STRA8.720e-831.91Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004012RUN domainSMARTSM00593893paper3coord: 173..236
e-value: 7.8E-6
score: 35.4
IPR004012RUN domainPFAMPF02759RUNcoord: 100..234
e-value: 7.8E-12
score: 45.3
IPR004012RUN domainPROSITEPS50826RUNcoord: 91..238
score: 21.399
NoneNo IPR availableGENE3D1.20.58.900coord: 25..242
e-value: 6.6E-26
score: 93.0
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 481..618
score: 11.033
IPR037213RUN domain superfamilySUPERFAMILY140741RUN domain-likecoord: 89..241
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 475..617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig450contigH-paniculata_contig450:80..17981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig450.11325.1mRNA_H-paniculata_contig450.11325.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig450 80..18040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig450.11325.1 ID=prot_H-paniculata_contig450.11325.1|Name=mRNA_H-paniculata_contig450.11325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=618bp
MSWISSIIPSGAGQERRNNGISRVVARQRAATRAQLVANLRNAAQGLATL
QAKVVGEESRRRGGAAGGGQGPSSSISSPSLSGNAHVPLLGGDTPEAIEV
CSALEQCLFHRIRTKDFRGVMPFWAYLERLERLPIATAAGARPGPRERRL
SSVRNTVGAVASCRRVSTAVGKARSWVRQCLVCKCLEACVGAVLAETRLV
QVFYEPTALARCEEGSTILLRLCAALEAFDIAVDADQSALDSAPRWPILE
REEEWDRRMDEDQARPATVTAASQQPLYNNSNATATGGGRGEGQEERGRG
GVGGEGGGGWVATATSEIDKLSQGESWAQLDGVISSFSSKVDQAVQSLDG
TLSELFGDKDIFGDNNSNGDSKNYNEGGRNLHRSVPASQTPLYTANSSGG
GGGGSIGNADRRQAGGVRDDAGWVEIRGDTLNATSSPSLTDARYRHHLHS
SAQGHSTASFPGGDAGLGRQGRKGKGRVFGVPLDQLVLDPERCNKGLLDP
ALGVPDAVANLMEALSEPTCYNTPGIFLEESSESELFRVVKSLEKTNQVP
IAAIGGPAWLISKITGGAASGAAAAAAGGGKAGGVSPHALASALLFFLHR
LPEPLLTFRRREAFLSCE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004012Run_dom
IPR000198RhoGAP_dom
IPR037213Run_dom_sf
IPR008936Rho_GTPase_activation_prot