prot_H-paniculata_contig45.11322.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45.11322.1
Unique Nameprot_H-paniculata_contig45.11322.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length738
Homology
BLAST of mRNA_H-paniculata_contig45.11322.1 vs. uniprot
Match: D8LQ68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ68_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 9.660e-27
Identity = 241/773 (31.18%), Postives = 316/773 (40.88%), Query Frame = 0
Query:    1 MADLFARATRQLEDSA---EEGGGRGLPVAASGGAAAGRNAALYAS--PRSEKARPVGVNIGTQTTWSFSGHEGVRFVSTPLRTPLHTLVEAGRGISPPTEHLVGW----GLRCPPARRSELPLIGGDFEREAEMDTHSLRDNESFCTPQRFQQLRRRAPEDSSGVTVETNEASRGEISGIASERSNFFNSPGLSPI-VDAR---PRLGREKVQVHNFRDSPGHCGSDTRYGSSKQTRSGGRGRMRQEMSQGLSPILSERSEHAPSGGEEARASSGVGSAASRVENIGVVKETAACAATGQEVMRATAGRGERPLRTDDDWDCSSGSRKGKQDSDGSESGQQWTPAAA----RRQACSSAFAESSPDVSGLSIIPASTTLETMALLEDTTRSFS-SFCAGSSFPGDLFADARLRDSSIFHSLRRQEVASSSQAPNLK---GGKWLIAPSP---PQDRSGQRRPRS--APTLLPEREVGTSTRQERRM------RDTSQGPGPAVDAVPPAVVGAWLAAALEGFYSHNAEAGGGACRNTQRAQKIGNGSNQSEQEAVPRFLGPVDLDPALERSPLTDVRRRRENQAALLREARTMGIRDEDVQFEYARAIATPARAYPVGRGDSPXXXXXXXXXXVDGDISKMSNXXXXIFYQRQRLIHRAVTAAARHGGIMQLPARGNSSCMGTARAAKFNFGEETEEERENYVNGG---WRRHSDPPS-WVTPPPPTGVAEGGVAGARRTGAIVDARTTMGTSP-YLRRHTSEYWRERLGMT 736
            MAD+FARA+ +L+      EE     LP+    GA    +AA  A+  P+ E+   VGV+ G QT+WSFS  + +RFVS P   PL T +  GR      E         GL   PA + E    G       ++    + D    CTP++ +      P        + N A   E +   SE S+FF+SP LSPI   AR   P    + V V +                                  GLS ILSE    A  GGE+ R   G      R  + G   E  A +ATG        G G        DW   S S   +++S    +G    P A     R       F +S  DV+  S++ AS+TL T+A L+DT    S S   G SF G+LFAD+RLR SS  +   R +  ++ Q    +   GG     P P    Q  S QR+ RS  APTL  E         +R +      ++ S G G     VPP VVGAWLA A+EG YSHN ++GGG        ++IG      ++            D +L R P    R       A+L                 AR+      A+  G  DS XXXXXXXXXX          XXXX                + HGG+M       S  + + R      G++  E  E  V  G   WRRHSDP S W  P   +G  +     A    A     +  GTS  Y+RRHTS YWR+RLGMT
Sbjct:  707 MADVFARASAELDGDGGGVEEEDRSCLPIEC--GAVVSADAATVAADPPKGERVS-VGVDAGCQTSWSFSARDEIRFVSIPANPPLSTRMADGRSCRRGAEEGAAAAGTAGLASRPAGKPERAAPGAAVCVPGDVP---VADPGPCCTPRQSRLPLCHTPSRRPRRKSDENLA---EGAAPKSETSSFFDSPNLSPIPAVARAGLPHSASQNVVVPSXXXXXXXXXXXXXXXXXXXXXXX----XXXXQDHGLSTILSEGEGSASPGGEKTRQGFG------RQAHDGPAAERRASSATGG------VGAG--------DWARGSESSSSRRESPFLAAGVPRVPRAGTAVDRSSGSGPLFMDSFADVTRSSVLRASSTLNTIAPLDDTGPPLSYSSRIGVSFAGELFADSRLRASSGSYRAPRYDACATPQREGEQTRAGGSCGALPLPRAQQQQVSSQRQRRSWSAPTLFSEWSKKHGAEADRVVAPGGPQKENSLGLG----GVPPDVVGAWLALAIEGIYSHN-DSGGGVTD-----KRIGESGGSQDRR-----------DCSLGRDPGPAARPSSGGGQAVL-----------------ARSCTQVGGAFASGPEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-HGGVM-------SPLLSSVR------GQDHREHGEQEVAPGGESWRRHSDPLSTWKVPAAGSGAVDATETSAAAGTASGWPDSGSGTSAAYMRRHTSGYWRDRLGMT 1394          
BLAST of mRNA_H-paniculata_contig45.11322.1 vs. uniprot
Match: A0A6H5L0S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S8_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 4.000e-23
Identity = 231/770 (30.00%), Postives = 306/770 (39.74%), Query Frame = 0
Query:    1 MADLFARATRQLEDSA---EEGGGRGLPVAASGGAAAGRNAALYASPRSEKARPVGVNIGTQTTWSFSGHEGVRFVSTPLRTPLHTLVEAGRGISPPTEHLVG----WGLRCPPARRSELPLIGGDFEREAEMDTHSLRDNESFCTPQRFQQLRRRAPEDSSGVTVETNEASRGEISGIASERSNFFNSPGLSPIVDAR----PRLGREKVQVHNFRDSPGHCGSDTRYGSSKQTRSGGRGRMRQEMSQGLSPILSERSEHAPSGGEEARASSGVGSAASRVENIGVVKETAACAATGQEVMRATAGRGERPLRTDDDWDCSSGSRKGKQDSDGSESGQQWTPAAA----RRQACSSAFAESSPDVSGLSIIPASTTLETMALLEDTTRSFS-SFCAGSSFPGDLFADARLRDSSIFHSLRRQEVASSSQ--APNLKGGKWLIA---PSPPQDRSGQRRPRS--APTLLPEREVGTSTRQERRMRDTSQGPGPA-------VDAVPPAVVGAWLAAALEGFYSHNAEAGGGACRNTQRAQKIG-NGSNQSEQE-AVPRFLGPVDLDPALERSPLTDVRRRRENQAALLREARTMGIRDEDVQFEYARAIATPARAYPVGRGDSPXXXXXXXXXXVDGDISKMSNXXXXIFYQRQRLIHRAVTAAARHGGIMQLPARGNSSCMGTARAAKFNFGEETEEERENYVNGGWRRHSDP-PSWVTPPPPTGVAEGGVAGARRTGAIVDARTTMGT-SPYLRRHTSEYWRERLGMT 736
            MAD+FARA+ +L+      EE     LP+    GA     A   A P   +   VGV+ G QT+WSFS  + +RFVS P + PL T +  GR      E  V      GL   PA + E    G       +       D    CTP++ +      P  S    ++++E    E +G  S  S+FF+SP LSPI        P    + V V     S G  G                         GLS ILSE    A  GGE+ R          R  + G V E  A +ATG       AG G R           S S   +++S    +G    P A     R       F +S  DV+  S++ AS+TL T+A L+DT    S S   G SF G+LFAD+RLR SS      R +  +  Q     ++ G+   A   P   Q  S QR+ RS  APTL  E      T  +R +      PG A       +  VPP VVGAWLA A+EG YSHN ++GGG        ++IG +G +Q  +  ++ R  GP  +                                +   Q   ARA +    A+  G  DSPXXXXXXXXXX          XXXX                                        +     E +E+ +      WRRHSDP  SW  P   +G        A    A   + ++ G  + Y+RRHTS YWR+RLGMT
Sbjct:  683 MADVFARASAELDGDGGGVEEEDRSCLPIEC--GAIVSAGAVTVADPPKGERGSVGVDAGCQTSWSFSARDEIRFVSIPAKPPLSTRMADGRSCRRGAEEGVAAVGTGGLASRPAGKPERAAPGAAVCVPGD-------DPGPCCTPRQSRLPLCHTP--SRRPRLKSDEY-LAEGAGPKSGTSSFFDSPNLSPIPAVAHAGLPHSACQNVVV----PSGGWRGXXXXXXXXXXXXXXXXXXXXXXQVHGLSTILSEGEGSASPGGEKTR------QGFDRQAHDGPVAERRASSATGG----VGAGDGAR----------GSESSSSRRESPFLAAGVPPVPRAGTAVDRSSGSGPLFMDSFADVTRSSVLRASSTLNTIAPLDDTGPPLSYSSRIGVSFAGELFADSRLRASSGSSRAPRYDACTPPQRAGEQIRAGENCCALPLPHAQQQVSSQRQRRSWSAPTLFSEWSKKHDTEADRVV-----APGGAQKENLLGLGGVPPDVVGAWLALAIEGIYSHN-DSGGGVTD-----ERIGGSGGSQGRRSCSLGRDPGPAAMPS------------------------------NGGSQAVLARAGSQVGGAFASGPEDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXVRGQHHREHDEQEDAPGGESWRRHSDPLSSWKVPATGSGAVNATETSAAAGTASGWSDSSSGMPAAYMRRHTSGYWRDRLGMT 1364          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45.11322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ68_ECTSI9.660e-2731.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0S8_9PHAE4.000e-2330.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45contigH-paniculata_contig45:42147..44803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45.11322.1mRNA_H-paniculata_contig45.11322.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45 41147..44853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45.11322.1 ID=prot_H-paniculata_contig45.11322.1|Name=mRNA_H-paniculata_contig45.11322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=738bp
MADLFARATRQLEDSAEEGGGRGLPVAASGGAAAGRNAALYASPRSEKAR
PVGVNIGTQTTWSFSGHEGVRFVSTPLRTPLHTLVEAGRGISPPTEHLVG
WGLRCPPARRSELPLIGGDFEREAEMDTHSLRDNESFCTPQRFQQLRRRA
PEDSSGVTVETNEASRGEISGIASERSNFFNSPGLSPIVDARPRLGREKV
QVHNFRDSPGHCGSDTRYGSSKQTRSGGRGRMRQEMSQGLSPILSERSEH
APSGGEEARASSGVGSAASRVENIGVVKETAACAATGQEVMRATAGRGER
PLRTDDDWDCSSGSRKGKQDSDGSESGQQWTPAAARRQACSSAFAESSPD
VSGLSIIPASTTLETMALLEDTTRSFSSFCAGSSFPGDLFADARLRDSSI
FHSLRRQEVASSSQAPNLKGGKWLIAPSPPQDRSGQRRPRSAPTLLPERE
VGTSTRQERRMRDTSQGPGPAVDAVPPAVVGAWLAAALEGFYSHNAEAGG
GACRNTQRAQKIGNGSNQSEQEAVPRFLGPVDLDPALERSPLTDVRRRRE
NQAALLREARTMGIRDEDVQFEYARAIATPARAYPVGRGDSPPPPPPPPD
GVVDGDISKMSNEEEEIFYQRQRLIHRAVTAAARHGGIMQLPARGNSSCM
GTARAAKFNFGEETEEERENYVNGGWRRHSDPPSWVTPPPPTGVAEGGVA
GARRTGAIVDARTTMGTSPYLRRHTSEYWRERLGMTQ*
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