prot_H-paniculata_contig45.11318.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig45.11318.1
Unique Nameprot_H-paniculata_contig45.11318.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length308
Homology
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 1.290e-94
Identity = 163/286 (56.99%), Postives = 187/286 (65.38%), Query Frame = 0
Query:   22 VICTGTRVIFLGEPSTSYVRNYLERQQEQKTPFNHDFAGFTDQNGNAEIYGAPPLPPPGFNERTVRVHLGDGKTCYKRARSALLRWQMHDGSSWARI-VQRRKSSWSLNSQIQMATVAKAMAGLAWCINPCQVLYERKDRTVTFLAPPESDRRQPLRNYSKANVPLVDRGTTTDTAHGIPLGRLWAGGSPRSAPLWASFGNRGRCRGIQSAVAYATKQGHLIQGEERMRVVWFRGRGDDGSVWFEVYSVSRGAGIVGGVVFPFVRSMQRRFFHEQAETMRCIVRSS 306
            VI +GT   F  EPS S VR YLERQ  +++P NH FAGF+D                GF ERTVR HLG GK  Y R R ALLRWQMH+GSSWARI + +R    +L  Q  + T+AKA AGL WCINPCQVLYER D  + F+APP +D  + L +     V        T    G   G LWAG  P SAP WASF    + +G QSAVAYATK GHLIQGEERMRV+ F G G D SVWFEVYSVSRGAG+VGG+VFPFV+SMQRRFF EQAETM+ +V SS
Sbjct:   17 VISSGTTFTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRAHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPAL--QRNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPV------ENTKRVMGGGGGALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS 294          
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: A0A835Z0Y9_9STRA (DUF1990 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.690e-21
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = 0
Query:  134 MATVAKAMAGLAWCINPCQVLYERKDRTVTFLAPPESDRRQPLRNYSKANVPLVDRGTTTDTAHGIPLGRLWAGGSPRSAPLWASF--GNRGRCRGIQSAVAYATKQGHLIQGEERMRVVWFRGRGDDGSVWFEVYSVSRGAGIVGGVVFPFVRSMQRRFFHEQAETM 299
            + T++ A+ G+ WC+NPC   Y   D   T                      +V+RG+    + G       A  + +   +   F    RGR RG+Q+A+AY T +GH  +GEER+RVVW       G VWFEV+S+SRG G  G  +FP +R  QRRFF +Q + M
Sbjct:   49 LCTISAALGGIMWCMNPCLTQYAVTDTPYTC---------------------VVNRGSKATDSSG-------ANSNLQCQQVRKRFPDAQRGRPRGMQTAIAYCTVRGHWFEGEERVRVVWEHD--SHGHVWFEVWSLSRGHGWWGAAIFPLMRRTQRRFFEDQVDAM 186          
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: R1E3Q5_EMIHU (DUF1990 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E3Q5_EMIHU)

HSP 1 Score: 92.4 bits (228), Expect = 1.860e-18
Identity = 75/252 (29.76%), Postives = 107/252 (42.46%), Query Frame = 0
Query:   59 AGFTDQNGNAEIY--GAPPLPPPGFNERTV--RVHLGDGKTCYKRARSALLRWQMHDGSSWARIVQRRKSSWSLNSQIQMATVAKAMAGLAWCINPCQVLYERKDRTVTFLAPPESDRRQPLRNYSKANVPLVDRGTTTDTAHGIPLGRLWAGGSPRSAPLWASFGNRGRCRGIQSAVAYATKQGHLIQGEERMRVVWFRGRGDDGSVWFEVYSVSRGAGIVGGVVFPFVRSMQRRFFHEQAETMRCIVRSS 306
            A   D+  N +I+   AP    P  + R +  RV LG G+ C++RAR  LL W+MH+GS+W+ ++       SL   + +A +      L W  NPC+ +  R  R                                                               RC     +V Y+T  GHL++GEE+M VVW R   +   V FEV S SRGAG +G ++FP + S QRRFF EQ    RC+ R++
Sbjct:   33 ASIADRAINHDIHLARAPASGTPARSLRVIAMRVPLGHGRACWRRARRRLLSWEMHEGSTWSAVLVEDPPGRSL---VTLAALPSPRLPLLWVSNPCRAVRRRVGRR--------------------------------------------------------------RC-----SVGYSTLSGHLLEGEEKMDVVWSR---ETDEVAFEVVSHSRGAGPLGKLLFPALSSTQRRFFREQC---RCMQRAA 208          
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: A0A7S2HS29_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HS29_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 1.400e-14
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = 0
Query:  223 GRCRGIQSAVAYATKQGHLIQGEERMRVVWFRGRGDDGSVWFEVYSVSRGAGIVGGVVFPFVRSMQRRFFHEQAETMR 300
            G+C    +AVAYAT +GHLI G E MRV + R    DG+V F+V+SVS GAG VG  +FP +   QRRFFHEQ   MR
Sbjct:  130 GQCVRRSTAVAYATTEGHLIAGVEHMRVTFSR----DGTVAFQVHSVSHGAGFVGRALFPLLAPAQRRFFHEQCRCMR 203          
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: L1JWA7_GUITC (DUF1990 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JWA7_GUITC)

HSP 1 Score: 63.9 bits (154), Expect = 3.300e-9
Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 0
Query:  238 QGHLIQGEERMRVVW--FRGRGDD-----GSVWFEVYSVSRGAGIVGGVVFPFVRSMQRRFFHEQAETMRCIV 303
            QGHLI+GEER+ V+W  +    D      G V+F + SVS G+G+VG ++FPF+R MQ RFF  Q ++M+  V
Sbjct:   40 QGHLIRGEERLAVLWDGYEPSKDPSSSELGRVYFAIRSVSAGSGLVGSLLFPFMRPMQDRFFASQLDSMQTSV 112          
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: A0A7S4NRR5_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NRR5_GUITH)

HSP 1 Score: 63.5 bits (153), Expect = 2.140e-8
Identity = 51/161 (31.68%), Postives = 66/161 (40.99%), Query Frame = 0
Query:  134 MATVAKAMAGLAWCINPCQVLYERKDRTVTFLAPPESDRRQPLRNYSKANVPLVDRGTTTDTAHG--IPLGRLWAGGSPRSAPLWASFGNRGRCRGIQSAVAYATKQGHLIQGEERMRVVW--FRGRGDD-----GSVWFEVYSVSRGAGIVGGVVFPFVR 285
            + T AK   GL W  NPC+ +YE  D                        VPL  R    D       P  RL                         S VAY+T QGHLI+GEER+ V+W  +    D      G V+F + SVS G+G+VG ++FPF+R
Sbjct:   81 VVTYAKCYGGLMWVRNPCRQVYEDVD------------------------VPLKHRARDADCFFNQLSPSARL-------------------------SQVAYSTLQGHLIRGEERLAVLWDGYEPSKDPSSSELGRVYFAIRSVSAGSGLVGSLLFPFMR 192          
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.280e-5
Identity = 29/64 (45.31%), Postives = 34/64 (53.12%), Query Frame = 0
Query:   22 VICTGTRVIFLGEPSTSYVRNYLERQQEQKTPFNHDFAGFTDQNGNAEIYGAPPLPPPGFNERT 85
            VI +GT   F  EPS S+VR YLERQ   ++P NH FAGF+D                GF ERT
Sbjct:   17 VISSGTTFTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig45.11318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LQ57_ECTSI1.290e-9456.99DUF1990 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835Z0Y9_9STRA1.690e-2135.12DUF1990 domain-containing protein n=1 Tax=Tribonem... [more]
R1E3Q5_EMIHU1.860e-1829.76DUF1990 domain-containing protein n=2 Tax=Emiliani... [more]
A0A7S2HS29_9EUKA1.400e-1455.13Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
L1JWA7_GUITC3.300e-946.58DUF1990 domain-containing protein n=1 Tax=Guillard... [more]
A0A7S4NRR5_GUITH2.140e-831.68Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A6H5L025_9PHAE1.280e-545.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018960Domain of unknown function DUF1990PFAMPF09348DUF1990coord: 232..295
e-value: 8.1E-11
score: 42.2
coord: 73..159
e-value: 9.9E-10
score: 38.7
NoneNo IPR availablePANTHERPTHR34202FAMILY NOT NAMEDcoord: 32..119
coord: 238..303
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 32..119
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 238..303
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..24
score: 0.506
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig45contigH-paniculata_contig45:786..6222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig45.11318.1mRNA_H-paniculata_contig45.11318.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig45 768..6836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig45.11318.1 ID=prot_H-paniculata_contig45.11318.1|Name=mRNA_H-paniculata_contig45.11318.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
MGGMAGLACVVLVMSSIVFQVVICTGTRVIFLGEPSTSYVRNYLERQQEQ
KTPFNHDFAGFTDQNGNAEIYGAPPLPPPGFNERTVRVHLGDGKTCYKRA
RSALLRWQMHDGSSWARIVQRRKSSWSLNSQIQMATVAKAMAGLAWCINP
CQVLYERKDRTVTFLAPPESDRRQPLRNYSKANVPLVDRGTTTDTAHGIP
LGRLWAGGSPRSAPLWASFGNRGRCRGIQSAVAYATKQGHLIQGEERMRV
VWFRGRGDDGSVWFEVYSVSRGAGIVGGVVFPFVRSMQRRFFHEQAETMR
CIVRSSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018960DUF1990