prot_H-paniculata_contig4497.11316.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4497.11316.1
Unique Nameprot_H-paniculata_contig4497.11316.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length326
Homology
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Match: D8LKN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN1_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.080e-40
Identity = 93/205 (45.37%), Postives = 125/205 (60.98%), Query Frame = 0
Query:  110 EGAFVTIWSVVVCCSISLAWAGAALGVMHVFVMVIFVVLVGVWCSLQFAWMYRDDPNTARFLERLLFGCLPLPTAAILSWAAIAVAGPAYAAPSIGLALFAAVGLYAVPLPSALGGGGAGMIHGNTSRVAPVLCVCLLLLPALVEVAVHWRLLFYRGAGGTGRGYWVLLRVCWAFAMPWPLVSSLERGRVLWWTTRSLRRRLEQV 314
            EGA V++W  V+  + +L WAG+ LG++H   ++   +LVGVW +LQF  +YRD P+ AR LERLLF C PLP AAIL+WA +A  G  YAAP + L ++AAVGLYAVPL S LGGGGAG                         ++V +RLL +  AGG  R +  L +V  A ++PWP++ SL    VLWW T  L RRL+++
Sbjct:   26 EGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACTLLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGATYAAPCVALFMYAAVGLYAVPLRSGLGGGGAG------------------------GISVDYRLLVW--AGGAVR-WKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLGRRLDKI 203          
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Match: A0A6H5L8K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8K5_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 2.310e-39
Identity = 69/114 (60.53%), Postives = 87/114 (76.32%), Query Frame = 0
Query:   60 SSTCFKHNSRVWAMGGPCIGILLMLGGRMTALIVAFGVMACYCFDLADNAEGAFVTIWSVVVCCSISLAWAGAALGVMHVFVMVIFVVLVGVWCSLQFAWMYRDDPNTARFLER 173
            SS  F HN RVWA GGPC+G+LL+LGGR T+L VAFGVMACYCFDLADNA GA V++W  V+  + +L WAG+ LG++H   ++  V+LVGVW +LQF  +YRD P+ AR LER
Sbjct:   55 SSPKFLHNLRVWAFGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAGGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVLLVGVWATLQFGTIYRDGPDAARLLER 168          
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Match: A0A7S0W061_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W061_9CRYP)

HSP 1 Score: 94.4 bits (233), Expect = 1.040e-17
Identity = 64/217 (29.49%), Postives = 99/217 (45.62%), Query Frame = 0
Query:   64 FKHNSRVWAMGGPCIGILLMLGGRMTALIVAFGVMACYCFDLADNAEGAFVTIWSVVVCCSISLAWAGAAL------GVMHVFVMVIFVVLVGVWCSLQFAWMYRDDPNTARFLERLLFGCLPLPTAAILSWAAIAVAGPAYAAPSIGLALFAAVGLYAVPLPSALGGGGAGMIHGNTSRVAPVL----------------CVCLLLLPALVEVAVH 258
            F+HN+R+     PC+GIL+  GG+ T   V  G M  Y  D     EG  + +W  VV    +L  A   L       +  V+ M+ F    G+W +LQF  + R++P T    ERLLF  +P     +++WA +A+AG       +   L A   LY +P+ S+       +  G + +V P                   +C ++LPAL++ AVH
Sbjct:   59 FQHNARIACFMLPCMGILMAYGGKTTTSTVVAGAMVTYMLDFYGWREGTLIAVWVTVVSSMATLFLASMHLFTVSIYNIALVYNMLAFCASAGLWGTLQFTQLQRENPRTVLICERLLFALMPATPPVLMTWATVAMAGAGACHYYLLAYLSAGFYLYVLPVRSSF----RVVARGRSKKVGPAADELDELIMGRFESTAHAMCFVILPALIKTAVH 271          
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Match: A0A7S0H7F1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H7F1_9CRYP)

HSP 1 Score: 75.9 bits (185), Expect = 1.720e-11
Identity = 54/170 (31.76%), Postives = 86/170 (50.59%), Query Frame = 0
Query:   59 FSSTCFKHNSRVWAMGGPCIGILLMLGGRMTALIVAFGVMACYCFDLADNAEGAFVTIWSVVVCCSISLAWAGAALGVMHVF-VMVIFVVLV-----GVWCSLQFAWMYRDDPNTARFLERLLFGCLPLPTAAILSWAAIAVAGPAYAAPSIGLALF-AAVGLYAVPLPS 221
            F    F++N+R      P + ILL+ GG+ T   V  G + CY  D     E  F+ +W  +   ++++  +   L ++  F + +I+ +L+     G+W SLQF++M R  P      ER+LF   P     I++WA I V G   AAP + LA+  AA  L+ +PL S
Sbjct:   29 FKFNHFEYNARTAMFLIPTLAILLLYGGKTTLATVIGGSIICYMLDFLGYQEPTFIAVWVTIAAMAVTIFISSIHLFLVTTFNITLIYNMLIASGALGIWGSLQFSFMQRQQPRLVLVFERMLFCITPCSPTVIITWAIIGVNGMG-AAPYVLLAVMTAAYFLFVLPLRS 197          
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Match: L1J9H0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J9H0_GUITC)

HSP 1 Score: 72.4 bits (176), Expect = 1.030e-10
Identity = 66/248 (26.61%), Postives = 106/248 (42.74%), Query Frame = 0
Query:   76 PCIGILLMLGGRMTALIVAFGVMACYCFDLADNAEGAFVTIWSVVVCCSISLAWAGAAL-----------GVMHVFVMVIFVVLVGVWCSLQFAWMYRDDPNTARFLERLLFGCLPLPTAAILSWAAIAVAGPAYAAPSIGLALF-AAVGLYAVPL-----------PSALGGGGAGMIHGNTSRV-APVLCVCLLLLPALVEVAVHWRLLFYRGAGGTGRGYWVLLRVCW-------AFAMPWPLVS 292
            P + ILL+ GG+ T   V  G + CY  D     E  F+ +W  +   +++L  +   L            +  ++ M+I    +G+W SLQF++M R  P      ER+LF   P     I++WA I V G + AAP + LA+  AA  L+ +P+           P  +      +      R    V  +  LLLP + ++A+H   L        G   W+L+RV +         A PW  ++
Sbjct:    9 PTLAILLLYGGKTTLATVIGGSIICYMLDFLGYQEPTFIAVWVTIAAMAVTLFISSIHLFLVLNSRVTTFNITLIYNMLIASGSLGIWASLQFSFMQRQQPRLVLVFERMLFCITPCSPTVIITWAIIGVNGMS-AAPYVLLAVMTAAYFLFVLPVRSSFRMPRKDRPKTITPSMTDLDETVLGRYETAVQTLAYLLLPVMFKIAIHHAHLIASRDDVAGLLTWMLIRVIFHSLNQYIKLAPPWNFIA 255          
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Match: A0A7S4LGI7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LGI7_9EUGL)

HSP 1 Score: 69.7 bits (169), Expect = 8.270e-10
Identity = 44/153 (28.76%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   64 FKHNSRVWAMGGPCIGILLMLGGRMTALIVAFGVMACYCFDLADNAEGAFVTIWSVVVCCSISLAWAGAAL---GVMHVFVMVI---FVVLVGVWCSLQFAWMYRDDPNTARFLERLLFGCLPLPTAAILSWAAIAVAGPAYAAPSIGLALFA 210
            FKHN++V  + GPC+  LL + G+ T  I+  G++  Y  D  +      VT+W+ +    +SL ++   L    + ++F+++    F++L+G+W ++QF W+    P  A   ERLL G  P+    ++  + + + G + A   I LA+ A
Sbjct:    3 FKHNAKVGLLLGPCMLPLLAVSGKFTLTILLCGMVFAYILDYLNFKGWTLVTLWATLCSVWLSLYFSNVLLIWQSLFNLFILMNASWFILLMGLWGTVQFRWLQLHSPELAIVCERLLIGLTPVIVLPLVYTSLVGILGVSNAPVLISLAMCA 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4497.11316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LKN1_ECTSI2.080e-4045.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8K5_9PHAE2.310e-3960.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0W061_9CRYP1.040e-1729.49Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0H7F1_9CRYP1.720e-1131.76Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
L1J9H0_GUITC1.030e-1026.61Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4LGI7_9EUGL8.270e-1028.76Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35313FAMILY NOT NAMEDcoord: 27..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..192
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 292..325
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..197
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 262..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 273..291
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..261
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 241..263
NoneNo IPR availableTMHMMTMhelixcoord: 273..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4497contigH-paniculata_contig4497:3279..7261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4497.11316.1mRNA_H-paniculata_contig4497.11316.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4497 3119..8623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4497.11316.1 ID=prot_H-paniculata_contig4497.11316.1|Name=mRNA_H-paniculata_contig4497.11316.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MSHFNPLFPYCFTGACFPLVPSRNVLSNKSNQHSWGRASQPQQQHPVPLS
STSSSSSSFSSTCFKHNSRVWAMGGPCIGILLMLGGRMTALIVAFGVMAC
YCFDLADNAEGAFVTIWSVVVCCSISLAWAGAALGVMHVFVMVIFVVLVG
VWCSLQFAWMYRDDPNTARFLERLLFGCLPLPTAAILSWAAIAVAGPAYA
APSIGLALFAAVGLYAVPLPSALGGGGAGMIHGNTSRVAPVLCVCLLLLP
ALVEVAVHWRLLFYRGAGGTGRGYWVLLRVCWAFAMPWPLVSSLERGRVL
WWTTRSLRRRLEQVELFPKKVTRFG*
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