mRNA_H-paniculata_contig44966.11315.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A) HSP 1 Score: 88.2 bits (217), Expect = 7.580e-20 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 4 PRNHQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDF 342
P +EA SP+ E W+ A E E++ L N W V RP+ + VV ++KRK+++DG+VE+YK RLVA G Q++GI Y+E SP S + +L+ + QDW++ + +
Sbjct: 31 PETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLLAFSVEQDWQVHQLGY 143
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A8H7NVE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVE6_9APHY) HSP 1 Score: 90.1 bits (222), Expect = 1.200e-18 Identity = 45/113 (39.82%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 13 HQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
++EA A PE EDW+ A E E+ + G + VE+PK VV + + ++K DE+ +V K+K RL A G Q+ G+ Y + ++P+ AS ++VL+LAA DWE+ +DF+ A
Sbjct: 223 YREAMAGPESEDWRVAMEEELAKIEAMGTYELVEKPKGANVVGCVWVLRKKRDENNEVAKFKARLCAQGFSQVHGVDYDQTAAPTARLASLRLVLALAAANDWEVHQIDFKNA 335
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA) HSP 1 Score: 85.5 bits (210), Expect = 1.420e-18 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 49 WQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
W+ A + E + L G W V P+N+ V+ + +YK K D+DGKV +YK RLVA G Q G+ Y E SP + ++VLSLAA W+LR +D + A
Sbjct: 65 WRNAMQEEFEALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAMNKWDLRQLDVKNA 165
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL) HSP 1 Score: 89.0 bits (219), Expect = 3.200e-18 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 19 EAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
EA+ P+W WQ A E+ L G WT V RP + VV + + K + G++EKYK RLVA G Q++G+ Y E +P+ AS ++VL++AA DW++ DF A
Sbjct: 1067 EARRRPDWPHWQAAINTELDSLKSAGTWTVVPRPSGRNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFDFNSA 1177
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI) HSP 1 Score: 88.6 bits (218), Expect = 4.260e-18 Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 1 EPRNHQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
EP+ ++EA AS E E W+RA E E LI N WT+ + P + ++ +I+K+K D DGKV +YK RLV G Q GI Y E +P S + + SLAA +D+E+ D + A
Sbjct: 564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTA 680
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 87.8 bits (216), Expect = 8.090e-18 Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 1 EPRNHQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
EPR+ EAQASPEW +W++A + E L G W + PK++ V +++RK +++G+V KYK RLVA G QI G+ + E +P S + +L+LA +WE+ +D + A
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGA 1022
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY) HSP 1 Score: 87.4 bits (215), Expect = 1.100e-17 Identity = 44/113 (38.94%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 13 HQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
++EA A PE +DW+ A + E+ + G + VE PK+ +V ++ + K+K DE V K+K RL A G Q+ GI Y E ++P+ + +S ++VL+LAA DWE+ +DF+ A
Sbjct: 719 YREAMAGPECDDWKIAMQEELAKIEAMGTYELVEPPKDVNIVGSVWVLKKKRDEHNNVAKFKARLCAQGFSQVYGIDYVETAAPTASLSSLRLVLALAAANDWEIHQIDFKNA 831
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A540MBJ7_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MBJ7_MALBA) HSP 1 Score: 85.5 bits (210), Expect = 1.200e-17 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 43 EDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
EDW+ A + E L G W V P ++ V+ + +YK K D+DGKV +YK RLVAHG Q +G+ Y E S + ++VLSLAA + WELR +D + A
Sbjct: 149 EDWRNAMKEEFVSLQKQGTWELVPPPVDRNVIGSKWVYKIKKDQDGKVSRYKARLVAHGYSQEQGLDYDETFSLVVRHTTVRLVLSLAAMKGWELRQLDVKNA 251
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: A0A8I6XHP4_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XHP4_HORVV) HSP 1 Score: 86.7 bits (213), Expect = 2.000e-17 Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 1 EPRNHQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
EP N EA SP W A + EM+ + NG WT V RP N+ V +YK K D G + KYK RLVA G Q +G+ Y E +P + +++L+LAA +DW++ H+D + A
Sbjct: 669 EPANFVEASKSPSWT---HAMDEEMKAIESNGTWTLVTRPPNQKTVGLKWVYKLKKDTKGAIVKYKARLVAKGYVQRQGVDYDEVFAPVARIETVRVLLALAAQEDWKVHHMDVKSA 782
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Match: UPI00090104FD (uncharacterized protein LOC104779870 isoform X1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00090104FD) HSP 1 Score: 85.1 bits (209), Expect = 6.460e-17 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1
Query: 4 PRNHQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMIYKRKIDEDGKVEKYKCRLVAHGNRQIKGIHYQEASSPSPTAASTKMVLSLAAFQDWELRHVDFEQA 351
P NH +A P +W A E LI G W V RPKN ++ +M +YK K D +G++ +YK RLVA+GN Q+ G+ E SP A+ + VL +A DW LR +D + A
Sbjct: 408 PLNHIQAARDP---NWNPAMGEEYSTLIKMGTWCLVPRPKNTNIIRSMWLYKHKFDSNGRLSRYKARLVANGNSQLPGVDCDETFSPVVKPATIRAVLHVATAYDWPLRQLDVKNA 520 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44966.11315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig44966.11315.1 >prot_H-paniculata_contig44966.11315.1 ID=prot_H-paniculata_contig44966.11315.1|Name=mRNA_H-paniculata_contig44966.11315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp EPRNHQEAQASPEWEDWQRAEEVEMQGLIDNGAWTQVERPKNKLVVSTMMback to top mRNA from alignment at H-paniculata_contig44966:2..352- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig44966.11315.1 ID=mRNA_H-paniculata_contig44966.11315.1|Name=mRNA_H-paniculata_contig44966.11315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=351bp|location=Sequence derived from alignment at H-paniculata_contig44966:2..352- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig44966:2..352- >mRNA_H-paniculata_contig44966.11315.1 ID=mRNA_H-paniculata_contig44966.11315.1|Name=mRNA_H-paniculata_contig44966.11315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at H-paniculata_contig44966:2..352- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |