prot_H-paniculata_contig44902.11305.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44902.11305.1
Unique Nameprot_H-paniculata_contig44902.11305.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length354
Homology
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BLAST of mRNA_H-paniculata_contig44902.11305.1 vs. uniprot
Match: D8LJK6_ECTSI (CID domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK6_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.010e-7
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:    2 VPEGDKGPVFRVIREWHEKGIFQGLEAFASGG 33
            VP+GDK PVFRVIREWHEKG+F+GLEAFAS G
Sbjct:  106 VPDGDKPPVFRVIREWHEKGMFKGLEAFASTG 137
[Close]
BLAST of mRNA_H-paniculata_contig44902.11305.1 vs. uniprot
Match: A0A6H5JF85_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF85_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 6.770e-7
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:    2 VPEGDKGPVFRVIREWHEKGIFQGLEAFASGG 33
            VP+GDK PVFRVIREWHEKG+F+GLEAFAS G
Sbjct:  106 VPDGDKPPVFRVIREWHEKGMFKGLEAFASTG 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44902.11305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJK6_ECTSI2.010e-784.38CID domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A6H5JF85_9PHAE6.770e-784.38CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44902contigH-paniculata_contig44902:418..1509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44902.11305.1mRNA_H-paniculata_contig44902.11305.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44902 418..1510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44902.11305.1 ID=prot_H-paniculata_contig44902.11305.1|Name=mRNA_H-paniculata_contig44902.11305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp
QVPEGDKGPVFRVIREWHEKGIFQGLEAFASGGGGAGTTGTTSNTHAPIS
STTLPLPDHLNSHRTDGPYGGAYPNGDGAAGSIQPYAPTYGGGGGSWGAV
TLGEGLDEPLSDSRFVPKEPPLPPEGDSVGPGEGDDAAGEDGGVEVSQQQ
EKEQEQYPPPPPPPGPPPSAQTAIDVAVNGGSVLERHRLFLQQQEQLQQQ
QQQQQQQQMQQQQQQQQQQQQQQQQDSNNLDQPPPPPPPPGTAAPQDEDQ
DNNVDMDEGEEEEPPPPPPPPPENGNGDGNNGDGGGSGKIMELWSLLHEA
NTSSAAAPATSTDASSSVNVDLATAVAPPPPPIPTSSPPTVEGSSVGAEG
HAAP
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