mRNA_H-paniculata_contig4487.11301.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: D8LS71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS71_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 1.200e-148 Identity = 217/302 (71.85%), Postives = 239/302 (79.14%), Query Frame = 1
Query: 103 GAVSG------DGVTSKLSRWFGCGEPLMVAGVAVYVGLVYLYWDDFRAYFDWAESLAITVKTGLPRVSVLDLVGSLLTCQAYRASATFPKHAVETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTAHYTKATVSACCTILSGTIAGCGGSILADLLSLEGSTWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHGFLSPDAPFPLSWLGTWSVAHGGGPSTEAAAMVAVYVTANHFMDYFSP 990
GA+ G G T +S G +PL+VAGVAVYV Y +W FR YFDW ESLAI+ K GLPR+SVLDL GS+LTCQAYR A FPKHAVETLVAC+LMQFGGT LVGVLVLGQ+PSWM S TAWPAL VAWWLTFFSP DLWH R MS + F+ FGRAVS +HAITSWGADKALTAH+ KA +SA CTIL GT+AGCGG ILADLL+L+G +WNL RTP ALASP FSVQR GASCLYY+LADPHG+LS +APFPLS LG SV HG GPSTEAAAMVAVYVTANH MDYF P
Sbjct: 12 GAIGGGGQKPKQGATRTVSTMMGSLDPLVVAGVAVYVATAYAFWGIFREYFDWTESLAISFKDGLPRLSVLDLFGSILTCQAYRGMAKFPKHAVETLVACSLMQFGGTFLVGVLVLGQTPSWMHSFTAWPALAVAWWLTFFSPWDLWHGRAMSNKACMFLAAFGRAVSASHAITSWGADKALTAHFEKAKMSAICTILCGTLAGCGGGILADLLNLDGDSWNLQRTPQALASPSFSVQRCFGASCLYYLLADPHGYLSEEAPFPLSLLGRLSVDHGNGPSTEAAAMVAVYVTANHLMDYFIP 313
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A482SCI6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCI6_9ARCH) HSP 1 Score: 142 bits (358), Expect = 4.000e-36 Identity = 94/231 (40.69%), Postives = 129/231 (55.84%), Query Frame = 1
Query: 205 YLYWDDFRAYFDWA----ESLAITVK--TGLPRVSVLDLVGSLLTCQAYRASATFPKHAVETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKAL--TAHYTKATVSAC---CTILSGTIAGCGGSILADLLSL--EGSTWNLSRTPSALASPPF----SVQRSLGASCLYYVLADPH 846
Y +DDFRA D+ ES + V LP +S+LD GS C+ YR + K E LVACTLMQFGGT + G L LGQ+PSW+ S +A+PA+ +AWWLTF+ P D++ + + FV+G AVS AHA++SWG DKAL H K +S CT LSG + GG IL D+L ++ RTPS + ++ ++L + +YY L +PH
Sbjct: 38 YFQFDDFRANVDYLNEYLESATVVVPFVPYLPPISILDFFGSACVCRTYRRNVEGRKSWFEVLVACTLMQFGGTTITGFL-LGQTPSWIMSKSAFPAMALAWWLTFYCPGDVFWKAIKNNSILLFVLGMFGAVSSAHAVSSWGVDKALFNAFHVNKEGISKAYMVCT-LSGAFSASGGGILTDVLGFFRPNKSFVPFRTPSLFMIDFYEASATINKALLLAVVYYSLVNPH 266
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A7S0I0V3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I0V3_9CRYP) HSP 1 Score: 121 bits (303), Expect = 6.650e-28 Identity = 90/266 (33.83%), Postives = 121/266 (45.49%), Query Frame = 1
Query: 118 DGVTSKLSRWFGCGEPLMVAG---VAVYVGLVYLYWDDFRAYFDWAESLAITVKTGLPRVSVLDLVGSLLTCQAYRAS-----------------ATFPKHAVETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTAHYTKATVSACCTILSGTIAGCGGSILADLLSLEGSTWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHGFL 855
DG T K S E +VA A+ V +VY + D + +W ES I VS LD GS + C A+R S F +A T+ CT +QFGGT G +LGQ PSW+ + A +AWWLTF SP D+WH M W + +S AHAITSWG +KAL A + + S +L G +G G ++ GS ++P +++QR+ LYY L DPHG L
Sbjct: 43 DGTTGKPST-----ETALVATFSFAALLVAVVYQNFHDAMIWMEWIESYKIFNAN----VSWLDFCGSCVVCHAFRVSLEKSIKAGDARIINMCKTAFGCYAT-TICTCTFLQFGGTTTTGA-ILGQYPSWLAGTHVFSAFLLAWWLTFCSPFDIWHFW-MKTPWLMIPIKAFATISSAHAITSWGMEKALNAEHERMRKSVWAALLCGFTSGSFGWVVVSYFETGGSAI-------VASAPSWAMQRAWYLIWLYYALTDPHGVL 289
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A7S2DJ93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJ93_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.130e-24 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 205 YLYWDDFRAYFDWAESLAITVKTG----LPRVSVLDLVGSLLTCQAYRASATFPKHAVETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSP 513
YL+WD + ++W S ++ PR+SV DL GS L C YR S K+ +ETLV CTL+QFGGT L+LGQSPSW++S TA+P+L V WWL+FF P
Sbjct: 22 YLWWDPYVELYEWFGSASLPTCPESFWHCPRLSVADLFGSCLVCYGYRTSLKTTKYWLETLVVCTLLQFGGTTCTA-LILGQSPSWLSSATAFPSLLVCWWLSFFCP 127
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A7S0E304_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E304_9CRYP) HSP 1 Score: 110 bits (274), Expect = 4.950e-24 Identity = 84/218 (38.53%), Postives = 116/218 (53.21%), Query Frame = 1
Query: 217 DDFRAYFDWAESLAITVKTGLP-RVSVLDLVGSLLTCQAYRASATFPKHA-VETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKAL-TAHYTKATVSACCTILSGTIAGCGGSILADLLSLEG--STWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHGFL 855
D + F +ES AI + LP S LDL+ +L TC +YR KH ++ ++C + FGGT V L LGQ P WM S ++ A +A+WL F P ++ + + + V G+ + S HA +SWGAD AL +AH S I G IAGCGG ILA+ L + G S W TP L P +V+ + ASC+YY+L +PH FL
Sbjct: 26 DGLQEIFLESESWAIPL---LPFHSSFLDLILALDTCASYRRHMGKNKHPWLQVFISCAVGTFGGTT-VAALFLGQPPGWMGSLSSPFAFLLAFWLIFCCPGNVPYKIISRHRSVELVFGYINSFSCGHATSSWGADGALNSAHMVVG--SGPMAIFCGMIAGCGGGILANWLGMIGKSSDWMFG-TPPVLKGPSITVRTAFFASCIYYLLRNPHEFL 236
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: F0Y383_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y383_AURAN) HSP 1 Score: 110 bits (276), Expect = 3.850e-23 Identity = 79/199 (39.70%), Postives = 104/199 (52.26%), Query Frame = 1
Query: 283 RVSVLDLVGSLLTCQAYR-----ASATFPKHAVETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTAHYTKATVSACCTILSGTIAGCGGSILADLLSLEGSTWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHGFLSPD 864
R S LD GS++ C YR A + P A L TLMQFGGT LVG+L LGQ PSW SH A +L +A+WLT+ P DLW + G A+S HAITSWG DKAL A + +A + +++G + GG +LA LL G P S ++ ++G S YY+L DPHG L+ +
Sbjct: 874 RFSTLDFFGSVVCCADYRRRLEAAGQSHPWFAA--LATSTLMQFGGTTLVGLL-LGQPPSWTLSHNAPRSLLLAFWLTWSCPGDLWTTAYRNSFVLRLFFATGAALSSGHAITSWGQDKALNAFHVQAQGAVFSALIAGALGASGGGLLAALLDPFG------ERPVGQRSYGAFLRAAVG-SVAYYLLRDPHGVLADE 1062
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A8J2SHU2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHU2_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.230e-22 Identity = 73/192 (38.02%), Postives = 101/192 (52.60%), Query Frame = 1
Query: 283 RVSVLDLVGSLLTCQAYRASATFPKHAVE---TLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTAHYTKATVSACCTILSGTIAGCGGSILADLLSLEGSTWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHG 849
R S +D GS + C A+RA K L C LMQFGGT LVG+L LGQ SW TS TA +L +A+WL+ PLDL++ R+ ++ ++ G A+S HA+TSWGADKA++A + K S T+++G GG + L L W R + F AS YY++ +PHG
Sbjct: 77 RFSTMDFFGSTVCCCAFRARLEQNKQKTPWFLALACCCLMQFGGTTLVGLL-LGQPASWTTSPTACRSLLLAFWLSVSCPLDLFY-RMYQHKIIKSMIAIGAALSTGHAVTSWGADKAISAIHPKPRSSVFSTLMAGAFGASGGGLSVHALDL----WGERRRGKERSYAAFLF--GAVASVSYYLMRNPHG 260
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A7S0W3X9_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W3X9_9CRYP) HSP 1 Score: 97.8 bits (242), Expect = 2.600e-19 Identity = 72/207 (34.78%), Postives = 99/207 (47.83%), Query Frame = 1
Query: 289 SVLDLVGSLLTCQAYRAS----------ATFPKHAVETLV------ACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTAHYTKATVSACCTILSGTIAGCGGSILADLLSLEGSTWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHGFLSP 861
S+LD GS + C +YR + A K++ V C QFGGT VL LGQ+PSW + A +AWWLTF SP D+W M + +S AHA+TSWG +KAL+A +T+ SA + G ++GC G L G L+R P +++QR+ A YY L +PHG L+P
Sbjct: 120 SLLDFAGSAMVCFSYRTATERSIAEGDAAACRKNSSPLAVYAYGIFICLFSQFGGTTSTAVL-LGQNPSWAAGNHVTNAFLLAWWLTFCSPGDVWF-EAMKLRAVRLPLQAVACISAAHAVTSWGLEKALSAEHTRMRGSAWGALACGYLSGCFGWPLVAFFETGGE--RLTRL-----GPSWAMQRTFYAVLAYYALTNPHGTLTP 317
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: L1JY25_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY25_GUITC) HSP 1 Score: 77.4 bits (189), Expect = 1.780e-12 Identity = 64/227 (28.19%), Postives = 100/227 (44.05%), Query Frame = 1
Query: 184 AVYVGLVYLYWDDFRAYFDWAESLAI---TVKTGLPRVSVLDLVGSLLTCQAYRASATFPKHAVETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTAHYTKATVSACCTILSGTIAGCGGSILADLLSLEGSTWNLSRTPSALASPPFSVQRSLGASCLYYVLADPHGFL 855
A+ V ++Y +DD + +W ES + ++K G R+ L++ + C A T +VG S + +H + A +AWWLTF SP D+WH+ M W + +S AHAITSWG +KAL A + + S +L G +G G ++ GS ++P +++QR+ +YY L DPHG L
Sbjct: 41 ALLVAILYQNFDDAMIWMEWIESYKVDIRSIKAGDQRI--LNMCKTAFGCYA-------------------------TTIVGY------DSSLGTHV-FSAFLLAWWLTFCSPFDIWHNS-MKTPWLMIPIKAFATISSAHAITSWGMEKALNAEHERMRKSVWAALLCGFTSGSFGWVVVSYFETGGSAI-------VASAPTWAMQRAWYLVWVYYGLTDPHGIL 225
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Match: A0A7S0UDZ5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UDZ5_HEMAN) HSP 1 Score: 75.1 bits (183), Expect = 3.500e-12 Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 1
Query: 289 SVLDLVGSLLTCQAYRAS----------ATFPKHA------VETLVACTLMQFGGTLLVGVLVLGQSPSWMTSHTAWPALPVAWWLTFFSPLDLWHHRVMSYEWFGFVMGFGRAVSGAHAITSWGADKALTA 636
S+LD GS + C +YR + A KH+ V + C QFGGT + LGQ+ SW + A +AWWLTF P+DLW M Y + VS AHA+TSWG +KAL+A
Sbjct: 92 SLLDFAGSAMVCFSYRTATQKAIADGDEALCRKHSSPLAHYVYGIFTCLFSQFGGTTSTAIF-LGQNASWTAGNHVTNAFLLAWWLTFCCPMDLWF-TAMQYRAMRLPVQAVACVSAAHAVTSWGLEKALSA 221 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4487.11301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4487.11301.1 >prot_H-paniculata_contig4487.11301.1 ID=prot_H-paniculata_contig4487.11301.1|Name=mRNA_H-paniculata_contig4487.11301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp MILRKRKAPPLLSWQSSGSESEPRDEVFSGGNDCGAVSGDGVTSKLSRWFback to top mRNA from alignment at H-paniculata_contig4487:4110..15489+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4487.11301.1 ID=mRNA_H-paniculata_contig4487.11301.1|Name=mRNA_H-paniculata_contig4487.11301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11380bp|location=Sequence derived from alignment at H-paniculata_contig4487:4110..15489+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4487:4110..15489+ >mRNA_H-paniculata_contig4487.11301.1 ID=mRNA_H-paniculata_contig4487.11301.1|Name=mRNA_H-paniculata_contig4487.11301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig4487:4110..15489+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |