prot_H-paniculata_contig4484.11299.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4484.11299.1
Unique Nameprot_H-paniculata_contig4484.11299.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length292
Homology
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BLAST of mRNA_H-paniculata_contig4484.11299.1 vs. uniprot
Match: D7G691_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G691_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 3.270e-105
Identity = 175/297 (58.92%), Postives = 219/297 (73.74%), Query Frame = 0 
Query:    1 MLACDPFEEISLSSQSYLATVCPRTALDGAAASEQTSVVPARTAFRVVKVTDPRLKDTVTQMQLYRDRQTSLPDGDGEPVRLGEEFHLVCDPGLRVCDAGNMRKPDLFLVSAPKSQSLASRVSNNQAVFLRASASSGSVWFFQKTTHGKDGSLNRILAKGSPVLVDTEIVLQHRDTMMALSCERENIEPTNFGTEFEVCCGNKTTRGKTLQLVAEQKGSKTAAAAAKAELRSNRWIVRQGTERKE-----GERSYQDRKIPPEMTAGNVLQEASTKQLLLFG----FKCIRYALQCI 288
            +LACDPFEEISL SQ+YLATVCP             S  PAR AF+VV V DPRLKD  TQ+Q++++ +  LPD +G+PV  G+ FHLV DPGLRVC++ NMR+P L+L S  K+Q+L+S+VSN QAVFLRA ASSG+VW FQK THGKDG ++RIL  GSPV VDTE+VLQHRDT+MALSCER NIEPT+FG EFEVCC N+TT GK LQL++E +G  TAAAAAKAELR+NRW+VR G          G     +R++PPEMTA N+L++A   QL++ G     +C+R AL+ +
Sbjct:   88 ILACDPFEEISLGSQTYLATVCP---------CPPQSPSPARMAFKVVAVNDPRLKDMATQVQMHKEMRDKLPDVEGQPVGYGDLFHLVGDPGLRVCESVNMRRPPLYLTSDLKTQNLSSKVSNKQAVFLRAGASSGTVWQFQKATHGKDGRVDRILGVGSPVCVDTEVVLQHRDTLMALSCERANIEPTDFGAEFEVCCDNRTTNGKCLQLLSETQGRTTAAAAAKAELRANRWMVRLGARDTANAGGGGSEEAGERRLPPEMTAENLLKKA---QLVIHGRVAGIQCLRNALRSV 372
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4484.11299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G691_ECTSI3.270e-10558.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24274FAMILY NOT NAMEDcoord: 32..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4484contigH-paniculata_contig4484:7472..15259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4484.11299.1mRNA_H-paniculata_contig4484.11299.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4484 7472..15274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4484.11299.1 ID=prot_H-paniculata_contig4484.11299.1|Name=mRNA_H-paniculata_contig4484.11299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=292bp
MLACDPFEEISLSSQSYLATVCPRTALDGAAASEQTSVVPARTAFRVVKV
TDPRLKDTVTQMQLYRDRQTSLPDGDGEPVRLGEEFHLVCDPGLRVCDAG
NMRKPDLFLVSAPKSQSLASRVSNNQAVFLRASASSGSVWFFQKTTHGKD
GSLNRILAKGSPVLVDTEIVLQHRDTMMALSCERENIEPTNFGTEFEVCC
GNKTTRGKTLQLVAEQKGSKTAAAAAKAELRSNRWIVRQGTERKEGERSY
QDRKIPPEMTAGNVLQEASTKQLLLFGFKCIRYALQCIIVG*
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