prot_H-paniculata_contig44774.11287.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44774.11287.1
Unique Nameprot_H-paniculata_contig44774.11287.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 78.2 bits (191), Expect = 1.740e-14
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAA 114
            EP+ ++EA AS E E W+RA E E   LI+N  WT+ + P  +  ++  +I+K+K   DGKV +YK RLV  G  Q  GI Y E  +P +   S + + SLAA
Sbjct:  564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAA 666          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A2P4X8M5_9STRA (Putative Pol Polyprotein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8M5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.710e-14
Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    9 LVVEPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAAI 115
            ++V+PKN++EA   P  E W+ A   E++ L  N  W  + +P+N  ++ +  +YK K+  DG+VE+Y+ RLVA GD Q+ G+ Y    S  L   S K++L+++ +
Sbjct:   15 VLVDPKNYREAMRDPRVEKWKEAMRTEIEALEHNDTWEVIVKPRNAKLLHSKWVYKLKIYADGRVERYRARLVARGDEQVYGVDYTFTFSAVLDLVSGKVILAVSRV 121          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 73.2 bits (178), Expect = 1.390e-13
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAA 114
            EP   +EA+AS +   W+ A + EM+ L +N  W  V+ PK++  +    ++KRK   +GK+ KYK RLVA G  QI+G+ Y E  SP     S + VLS AA
Sbjct:   77 EPGTVKEARASEDANQWEEAMKDEMKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAA 179          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A1M2VH23_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VH23_TRAPU)

HSP 1 Score: 71.2 bits (173), Expect = 1.460e-13
Identity = 39/103 (37.86%), Postives = 61/103 (59.22%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAA 114
            EP+   EAQASP+W HW+ A   E+ +L ++  +  VE P N  +V +  +++ K   +G + +YK RLVA G  Q+ GI + E  +P    AS + +L+LAA
Sbjct:   12 EPRTLAEAQASPDWPHWENAIAKEIDNLRKHDTYDLVEPPHNTNIVGSRFVFRIKRDAEGSITQYKARLVAQGFTQMPGIDFNETFAPVAKLASIRTILALAA 114          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 75.1 bits (183), Expect = 2.020e-13
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 0
Query:   10 VVEPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAA 114
            + EP ++Q+A A     HW+ A ++E++ L +N  W+ V+ P N   V    +YK K+  DGKVE+YK RLVA G  QI+G  YQE  SP       +M  +LAA
Sbjct:  157 IFEPNSYQKAVAHS---HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAA 258          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 75.1 bits (183), Expect = 2.140e-13
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAA 114
            EP+ +QEA + P+ E W+ A   E+    +   + +VERP+N+ VV    +++ K G DGK++KYK RLVA G  Q++G+ Y +  +P    AS +M+L+ AA
Sbjct:  963 EPRTYQEAMSRPDAEQWKAACAEELLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAA 1065          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A8J5YQU7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YQU7_9ROSI)

HSP 1 Score: 73.9 bits (180), Expect = 5.290e-13
Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    7 GDLVV----EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVL 110
            GD+++    EP+ +QE   SP+ E W  A   EM  + EN+ WT V+ P+    +    ++K+K   DG V+ YK RLVA G RQI G+ Y +A SPA    S +++L
Sbjct:  537 GDILLIDQDEPRTYQEVVTSPDSEKWLEAMRSEMDSMYENQVWTLVDPPEGVKPIGCKWVFKKKTDMDGNVQTYKGRLVAKGFRQIHGVDYDKAFSPAAMFKSIRILL 644          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A1E1KFU7_9HELO (Uncharacterized protein n=1 Tax=Rhynchosporium commune TaxID=914237 RepID=A0A1E1KFU7_9HELO)

HSP 1 Score: 71.2 bits (173), Expect = 4.590e-12
Identity = 35/104 (33.65%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAAI 115
            +P++++EA + PE   W+ A E E   L++NR W  V  PK++  ++T   +++K+G +G++ +YK R+VA G +QI+G  + E  S  + AAS +++ ++ A+
Sbjct:  282 DPQSYKEALSGPEAPLWKEAIEAEYNSLLQNRTWKVVRMPKDRKPLTTKWTFRKKLGGEGEITRYKARMVARGFQQIEGFDFTETYSNVVKAASYRILFAMTAL 385          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI)

HSP 1 Score: 70.5 bits (171), Expect = 8.840e-12
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   11 VEPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPALAAASTKMVLSLAA 114
            +EP  + EA+   +WE W +A + +M  L+    W  V+ P  +  + +  +YK K+ E+GK +++K RLVA G  Q+ G+ Y E  +P     S +++L+LAA
Sbjct:  730 LEPATYAEARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAA 833          
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Match: UPI00092FCD17 (uncharacterized protein LOC109338179 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092FCD17)

HSP 1 Score: 67.4 bits (163), Expect = 9.550e-12
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVERPKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSP 99
            +PK ++E     + E WQ A E EM+ +  N+ WT VE  K+   +    +Y + +GEDGKVE YK RLVA G  Q  GI Y E  SP
Sbjct:   49 DPKCYEEVMQISDNEKWQEATESEMESMKTNKVWTLVEASKDIKPIVCKWVYNKNIGEDGKVETYKARLVAKGYCQKGGIDYDETYSP 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44774.11287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K690_LASNI1.740e-1441.75Retrovirus-related pol polyprotein from transposon... [more]
A0A2P4X8M5_9STRA3.710e-1435.51Putative Pol Polyprotein n=1 Tax=Phytophthora palm... [more]
UPI001CB79F241.390e-1340.78hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
A0A1M2VH23_TRAPU1.460e-1337.86Retrovirus-related Pol polyprotein from transposon... [more]
A0A061F8M9_THECC2.020e-1340.95Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A060SSE0_PYCCI2.140e-1338.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YQU7_9ROSI5.290e-1338.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A1E1KFU7_9HELO4.590e-1233.65Uncharacterized protein n=1 Tax=Rhynchosporium com... [more]
A0A177U1E5_9BASI8.840e-1233.65Integrase catalytic domain-containing protein n=2 ... [more]
UPI00092FCD179.550e-1243.18uncharacterized protein LOC109338179 n=1 Tax=Lupin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 45..114
e-value: 4.5E-12
score: 46.1
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 12..115
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44774contigH-paniculata_contig44774:1248..1592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44774.11287.1mRNA_H-paniculata_contig44774.11287.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44774 1248..1592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44774.11287.1 ID=prot_H-paniculata_contig44774.11287.1|Name=mRNA_H-paniculata_contig44774.11287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MPEELRGDLVVEPKNHQEAQASPEWEHWQRAEEVEMQDLIENRDWTQVER
PKNKLVVSTMVIYKRKVGEDGKVEKYKCRLVAHGDRQIKGIHYQEASSPA
LAAASTKMVLSLAAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like