mRNA_H-paniculata_contig4474.11281.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: D8LRL1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL1_ECTSI) HSP 1 Score: 374 bits (961), Expect = 4.700e-105 Identity = 440/1272 (34.59%), Postives = 572/1272 (44.97%), Query Frame = 1
Query: 1 PLTMEEICKGILTEDMLRVAAG---TRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNPLMTSLDKLLGGQDRRVIHSLIPQLRILGKSSLSLLETNAVSDGTLRDANTLMREGVSRARAAWAEDSNISAQCTGGCPE-------------KEETRDPNS----------------SPVSSSPSD-GVRSRHGGEGGRSS------PDRG--MHWDSELTQGGCPAFSGNPSSAIRRHKTRENIDTRRRQPSPPRVLDTLNLAKQIELGLRHRREPSNFDHRARRQHNQLADRVSEWQQETCSDSFPQESLIS--------PPHASGNSSTSTESSSQEEEVKDKYVRRGSFRQAVEGKRR-----GRKQRSPGGNLASPLMDTQFRREHERCDGS-GASVRNSTRAGDVPL-AREARPWTT-GHVA-----GSRSAISPPWSGFPHRAYEVSSQKIGVSKIAGEGGAESLAVETNNRNERTSETGARNRNQQRHLYRRPQTVIEL--------GTRRQSCSTKIEVSSLLDTGWQHVWESLQTGGLLCA----KTGGIEVTTKSRDLSRRTET------PKPSWRPGSGHFQGNVDFRNQRRTRKIIRARSAGRRRGGNTDEDISTGSESGSATGADXXXQSSVISEDADGRDEIKKKAAAFTSVASVSTDDHIAVVGCSTT---GPSFSCDSPSSA---------HRKGSKSCREGHGHKI-----DSPLGMSMAGDLTTRVQR--------------------------------------RRGEKISWRAASRRSVATMNDSSRGSSSGEKNDNCCRETAQTTKGVGSTRDENSRIGGSVGVTPGSSTGSASRRMPSTHASRMLGFDLRKSLAAIDEWTQKASLVVSTIDGE--PETPRPEPA------RPPACFIENA---------------DEAMLKRHRGSSADAQDNGGRTGKLQNENRKMNAWDSFTTNSSKRANTVVGVTSTGSDEDSDD-EEVLSVTAAREALGISKRQDRRRDTVAPATTTTTP------IGYTPRSMGATRAPESTSRTGKDSSKGRRMVGNVGSRRRTNESSASKQWNKLEGLAMGMSDEVLEGMLRRQPRTVPELRTKDNFRYFFRGMEAGRMDRLLRKAYDGTLPPGEVDKKVEKRLGLVGDMLSW 3321
PLT+EE+ +G+LTE+ +RVAAG TRQL+ V+RL++ I+S + SVE VW ++P LHTL LDGSRL SFRDLG LR+L+TLS+E S VEDLDGI LS LRELRLA N+ XXXXXXXX K LEIL ++PLLYSLN+ QNPL SL KL G+ R V+ LIPQ+R+L LS E+ AV TL +A L+ SRARAAW+E+ A +E+ P+ S S SP+ GV + G GG S PD+G MHWDS+LTQGG A SGNPSSAIRRH+ R R + +P RVL+TL+LAK +E GL+ R Q ADRVSEW++ET SDSFPQE S PP + SSS V+ + RR VEG RR K + +L + + + VR AG A RPWT+ G + G ++++ W P + E +G E R R RRPQT E G R + + WQ VWESLQT L+ + +T V + + E P G G G+VDF QRR R +RA G D D S G+ S G +++AD R EIKK+A+ F S AS ++ ST G S SPS+ GS RE D P+ + +G RR K++ + ++SV D RGS SG + + VGS D R GGS T G S + R+ S HASRMLGFDL++SLAAI+EWT KA G TPR E RP F+E+ +K + + +++ GG + + +++ M + + +A V + + +DSDD E VLSV AAR ALGISK A A T TTP + TP + A A R G S S+R SS + G+A+G+ DE L+ ML++QPR VPELRTK++FR FF+GM A RM+RLLR AY+ LPP +VDKKV+KRLGLVGD L+W
Sbjct: 766 PLTLEELSEGMLTEEAIRVAAGKATTRQLRDVSRLQIVIDSSKV-SVESVWDAVPKLHTLTLDGSRLESFRDLGVGLRHLNTLSLESSCVEDLDGIGALSGLRELRLARNRXXXXXXXXXXXXXXXXXXXXXXXXXXKALEILSSLPLLYSLNVSQNPLTESLSKLRDGRGRGVVRQLIPQIRVLDGIQLSGGESGAVDAQTLDEAVDLICRDASRARAAWSEEGVTEAAAXXXXXXXXXXXXATTIKVVQEDRWRPDGVGKDERLPLAGLDSCFSRSSRSPTKPGVATVAGLGGGGSPIPPQLVPDQGGGMHWDSDLTQGGRQALSGNPSSAIRRHQCRGGAGNGRNEHTPTRVLETLDLAKVMEKGLKQRHSTQ-----------QSADRVSEWRRETNSDSFPQEEDPSYEPLDETAPPSPLALEALPLSSSSA---VEGGFHRRAGL---VEGGRRDSDILATKPTTTWASLTTSVANXXXXXXXXXXXXXVDDGVRQKLSAGKGGTRASSGRPWTSEGDIGASGRGGGSASVTNQWRAPPGQ--EQHGGAVGDXXXXXXXXXXXXXXEPEARPHRRR--------------RRPQTAKEAPGKRCMNGGGGRFDSEQDETFRNYRNACWQPVWESLQTARLISSPRLFQTTNKSVAATNPAAAAGVERGGSGGGPATQAGDGMGRKIGSVDFGRQRRARATVRASRVGDD-ANYLDLDESDGASSARDEGEGAGSSGGDDAQEADDRTEIKKRASGFCSPASKASGGSGIASRLSTARSRGVPTSSSSPSAVLPAEXXXXXXXAGSTVARELKNEATPQQPGDKPVEGNSSGRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRRAFKLA-ASGRKKSVRHTEDGRRGSCSG------AGVSVGASAAVGS--DGGGRDGGSSSSTGGFSP--SPNRVTSIHASRMLGFDLQRSLAAIEEWTDKAPAAAIIGGGNHCANTPRQEAPYDLRKNRPAPFFVEHTAFPSPSPSARGTAPFSSPPVKSNLLAGRESEGGGGLSSTVISDSSMMP--QTIDPRARAKATVVPDIIAITQTDDSDDGEAVLSVAAARAALGISK------GVTAAALTCTTPRSARAWVAPTPAEIDALTAEGIDGRVGLVPSSSATQA--CASKRCEYGSSQAGSAGPSAGVAVGICDEDLKEMLKKQPRMVPELRTKEHFREFFQGMGAERMERLLRGAYE-DLPPDQVDKKVKKRLGLVGDKLAW 1980
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A6H5JGL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGL1_9PHAE) HSP 1 Score: 360 bits (924), Expect = 9.120e-102 Identity = 435/1267 (34.33%), Postives = 564/1267 (44.51%), Query Frame = 1
Query: 1 PLTMEEICKGILTEDMLRVAAG---TRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNPLMTSLDKLLGGQDRRVIHSLIPQLRILGKSSLSLLETNAVSDGTLRDANTLMREGVSRARAAWAEDSN---ISAQCTGGCPEKEET---------------RDP-------NSSPVSSSPSDGVRSRHG-GEGGRSSPDR-------GMHWDSELTQGGCPAFSGNPSSAIRRHKTRENIDTRRRQPSPPRVLDTLNLAKQIELGLRHRREPSNFDHRARRQHNQLADRVSEWQQETCSDSFPQESLIS--------PPHASGNSSTSTESSSQEEEVKDKYVRRGSFRQAVEGKRRGRKQRSPGGNLASPLMDTQFRREHERCDG-------SGASVRNSTRAGDVPLAREARPWTTGHVAGSRSAISPPWSGFPHRAYEVSSQKIGVSKIAGEGGAESLAVETNNRNERTSETGARNRNQQRHLYRRPQTVIELGTRRQSCSTKIE------VSSLLDTGWQHVWESLQTGGLLCA----KTGGIEVTTKSRDLSRRTETPK----PSWRPGSGHFQ--GNVDFRNQRRTRKIIRARSAGRRRGGNTDEDISTGSESGSATGADXXXQSSVISEDADGRDEIKKKAAAFTSVAS-VSTDDHIAVV-------GCSTTGPSFSCDSPSSAHRKGSKSCREGHGHKI--------DSPLGMSMAGDLTTRVQRRRG-EKISWR-----------------------------------AASRR-SVATMNDSSRGSSSGEKNDNCCRETAQTTKGVGSTR----DENSRIGGSVGVTPGSSTGSASRRMPSTHASRMLGFDLRKSLAAIDEWTQK--ASLVVSTIDGEPETPRPEPARP-----PACFIENADEAMLKRHRGSS------------ADAQDNGGRTGKLQNENRKMNAWDSFTTNSSKRANT-----VVGVTSTGSDEDSDDEE------VLSVTAAREALGISKRQDRRRDTVAPATTTTTP------IGYTPRSMGATRAPESTSRTGKDSSKGRRMVGNVGSRRRTNESSASKQWNKLEGLAMGMSDEVLEGMLRRQPRTVPELRTKDNFRYFFRGMEAGRMDRLLRKAYDGTLPPGEVDKKVEKRLGLVGDMLSW 3321
PLT+EE+ +G+LT++ +RVAAG TRQL+ V+RL++ I+S S+EGVW ++P LHTL LDGSRL SFRDLG LR+L+TLS+E S VEDLDGI LS LRELRLA N+VSDVT XXXXXXXX +K LEIL ++PLLYSLNL QNPL SL KL G+ R V+ LIPQ+R+L LS E AV TL +A L+ SRARAAW+E+ ++A G T +D NS S GV + G G GG P + G+HWDS+LTQGG A SGNPSSAIRRH+ R R + +P RVL+TL+LAK +E GL+ R Q ADRVSEW++ET SDS P+E S PP + SSS + D+ R +EG R+ +P G ST G A RPWT+ V G+ S G E AR+ ++R RPQT E +R + + + WQ VWESLQT L+ + +T V + + E P+ + G G G+VDF QRR R +RA S G D D + G+ S G S++AD R EIKK+A+ F S AS S IA G T+ S S P+ A S + K D P+ + +G + +RR SWR A R+ SV D RGS SG GVG+ D R G S +T G + R+ S HASR LGFDL++SLAAI+EWT K A ++ + TPR E PA F ++ RG++ A + GG G L + ++ T + RA ++G+ T +D D VLSV AAR ALG+SK + A T+TTP + TP + A A R G S S+R ES + L G+A+GM DE L+ ML++QPR VPELRTK++FR FF+GM A RM+RLLR AY+ L P +V KKV+KRLGLVGD L+W
Sbjct: 135 PLTLEELSEGMLTQEAIRVAAGKATTRQLRDVSRLQIVIDS-SMVSIEGVWDAVPKLHTLTLDGSRLESFRDLGVGLRHLNTLSLESSCVEDLDGIGALSGLRELRLARNQVSDVTXXXXXXXXXXXXXXXXXXXXMKALEILSSLPLLYSLNLSQNPLTESLSKLRDGRGRGVVRQLIPQIRVLDGIHLSSGEGGAVDAQTLDEAVDLICRDASRARAAWSEEGVTEVVAAAAAVGAASTATTIKVVQQDRWRPDGVGKDECLPLAGLNSCFPRSPTKPGVATVAGLGGGGSPIPPQLVPGQGGGIHWDSDLTQGGRQALSGNPSSAIRRHQCRGGTGNGRNEDTPTRVLETLDLAKVMERGLKQRHSTQ-----------QSADRVSEWRRETSSDSVPREEDPSYEPLDGTAPPSPLVLEAIPLSSSSAVDGGFDRRAR------LIEGGRKDSGILAPKATTXXXXXXXXXXXXXXXXXXXXXXXXDDGVRKTLSTGKGGT-RASSGRPWTSEGVFGASSR------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEPEARSHRRRR----RPQTAKEAPGKRCMNGGLFDGEQDEMFRNYRNASWQPVWESLQTARLISSPRLFQTTNTSVAAPNPAAAAGVERGDLGGGPATQAGDGARWKIGSVDFGRQRRARATVRA-SRGGDDANYLDLDETDGASSARDEGEGAESSGGDDSQEADDRTEIKKRASGFCSPASKASVGSGIASRLSTSRSRGVPTSSSSPSAVLPAEAAAVASSTSAVACEWKNEATPQQPGDKPVEGNSSGRQPPKARRREAVSSFSWRPLKVMDDTXXXXXXXXXXXXXXXXXXXVRRAFKLAAPGRKMSVRHTEDGRRGSCSG------------VAVGVGARAAVGSDGGGRDGDSSSITGGFRP--SPNRVTSVHASRKLGFDLKRSLAAIEEWTDKTPAGAIIGGGNHCANTPRQEAPNDSRKNQPAPFFVEHTPSLSPSPRGTAPFSSPPVKSNSLAVRESKGG--GCLSSAVISDSSMMPQTIDHRSRAKATVVPDIIGIART---DDGDXXXXXXXXPVLSVAAARAALGMSKG-------LTAAATSTTPRSGRAWVAPTPAEIDALTAEGIDGRVGLVPSSSATQA--CASKRNEYESRQAGSAGSLAGVAVGMCDEDLKEMLKKQPRMVPELRTKEHFREFFQGMGAERMERLLRGAYE-DLSPDQVGKKVKKRLGLVGDKLAW 1342
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A7S4QSP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QSP7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.430e-12 Identity = 67/171 (39.18%), Postives = 91/171 (53.22%), Query Frame = 1
Query: 28 GILTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNPLMTSLDKLLGGQDRRVIHSLIPQLR 540
GI M R GTR L+ VT+LELA++ V S++ + LP L L+LD S + S RDL ++ L +S+ + G++DLDGI VLS L ELR XXXXXXXX I E+LGT LL+SL+L NP+ R+++ IPQ+R
Sbjct: 6 GIFLSSMQRFC-GTRDLRLVTQLELAVD-VSQMSLDKIMFLLPSLQRLILDNSLIPSLRDLCTNMNTLRMISMSNVGLQDLDGISVLSGLSELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSFELLGTCTLLHSLDLRGNPIARGAPNY-----RQIVCYHIPQVR 169
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A3Q3E4S4_9LABR (Leucine rich repeat containing 56 n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3E4S4_9LABR) HSP 1 Score: 80.5 bits (197), Expect = 1.070e-11 Identity = 68/205 (33.17%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 34 LTEDMLRVAAGTRQLQTVTRLELAINSVETPSVE-GVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNPLMT----SLDKLLGGQDRRVIHSLIPQLRILGKSSLSLLETNAVSDGTLRDANTLMREGV 633
LT + L GT+ L VT LEL IN+ E P GV+ LP L L ++ S + S RDLG L +L L + ++DLDGI S L+EL +A N VSD++P+ +LQ+ ++ ++ LG L L L NPL + + R + LIPQLR L +L++ E T+ + T++R +
Sbjct: 50 LTPERLEWLCGTQDLCRVTSLELCINTQENPLGNFGVY--LPKLVQLNMNNSVIMSVRDLGTTLSHLQVLWMFRCSLQDLDGIPSFSALKELYVAYNNVSDLSPVGMLENLQLLDLEGNNVDDLVQIQYLGLCGKLERLTLEGNPLCVRPYPTAIQTADYSYRAAVRDLIPQLRYL--DNLTVEEEGRSCTSTMGEEWTILRNSI 250
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A1Y1HQI7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQI7_KLENI) HSP 1 Score: 78.2 bits (191), Expect = 4.630e-11 Identity = 69/236 (29.24%), Postives = 105/236 (44.49%), Query Frame = 1
Query: 25 KGILTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNPLMTSLDKLLGGQDRRVIHSLIPQLRILGKSSLSLLETNAVSDG---------------TLRDAN-----TLMREGVSRARAAWAEDSNI 672
+G LT LR G L TV+ LEL++N+ E + V +P L L L S L RDLG L L L + G++++DG+ L +LREL A N + D+ P+A +L++ ++ + LG P L +L L N D R + LIP L +L + + + +A + G T R A+ L+R+G+ AR A A D +
Sbjct: 12 EGGLTAAFLRTVTGAEDLSTVSCLELSVNAAEACLFD-VGQLVPQLRELKLLDSTLPQIRDLGTGLMQLQVLWVPRCGLQEVDGLSSLPKLRELYAAFNDIEDLAPIAGLENLEILDLEANKVADLDGVAFLGMCPKLQALTLEGN------DVAAAPNYRSSVVELIPTLTMLDELPVGPSDRDAAAAGGQVPGQTPVVEAAPETPRSADELRELVLVRDGIKYARVAAAPDETL 240
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A482VWC9_9CUCU (Leucine-rich repeat-containing protein 56 (Fragment) n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VWC9_9CUCU) HSP 1 Score: 71.2 bits (173), Expect = 6.410e-10 Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 10 MEEICKGILTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQV 369
+E +G+L + GT L VT+++L + + + P ++ + +P L L+LDGS L SFRDLG+ L+NL L + GVE LDG++ L L EL A N + + P A S+++
Sbjct: 57 LEHNLRGLLVQ-----VTGTEDLARVTQVKLRVIARDVP-LQHLSFHIPALRELILDGSVLSSFRDLGSGLKNLKILKVNRCGVECLDGMLNLESLEELYAADNCIENCMPCAFLSSIKI 170
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: UPI0011B6C151 (leucine-rich repeat-containing protein 56 n=1 Tax=Gadus morhua TaxID=8049 RepID=UPI0011B6C151) HSP 1 Score: 73.6 bits (179), Expect = 1.870e-9 Identity = 62/210 (29.52%), Postives = 99/210 (47.14%), Query Frame = 1
Query: 34 LTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNPLMTSLDKLLGGQD------RRVIHSLIPQLRIL----------GKSSLSLLETNAVSDGTLRDANT 615
L+ MLR GT L ++ LE+ +++ E ++ + A LP L L L+ S + S RDLG+ L +L L + ++DLDG++ + L+EL LA N VSD++ QV ++ ++ L L++L+L NP+ G R + L+PQLR L G S ++ E AV +RD N+
Sbjct: 37 LSPAMLRTVCGTEDLSQISCLEICVDTREN-TLGNIGACLPGLVELRLNNSAMASVRDLGSTLAHLQVLRLSRCCLQDLDGVIPFTHLKELYLAYNSVSDLSQXXXXXXXQVLDVEGNDVDDLVQVQNLAFCSQLHTLSLQGNPVCVRPHP--GASQGSEYSYRVAVRELVPQLRYLDDVRVEEEGPGSISSTMGEEWAVVRDAIRDRNS 243
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A6I9KP65_CHRAS (leucine-rich repeat-containing protein 56 n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9KP65_CHRAS) HSP 1 Score: 72.8 bits (177), Expect = 2.210e-9 Identity = 90/301 (29.90%), Postives = 137/301 (45.51%), Query Frame = 1
Query: 34 LTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQN-----PLMTSLDKLLGGQDRRV-IHSLIPQLRILGKSSLSLLETNAVSDGTLRDANTLMREGVSRARAAWAEDSNISAQCTG-GCPEKE----ETRDPNSSPVSSS-PSDGVRSRHGGEGGRSSPDRGMHWDSELTQGGCPAFSGNPSSAIR--RHKT 894
L+ L+ A L+ V+ LE+ ++S + S+ LP L L L+GSRL S RDLG L +L L + G+ DLDGI L+EL +A N +SD++PL L+V ++ + L P L +L L N P +K G + R + LIPQL++L ++ + +T ++ TL +++E + R DS + TG G P K + R P+ P+S P D + + G D S LT G GNP+ +R RHK+
Sbjct: 54 LSPSRLQALAQVDDLRVVSVLEMCVDSHKN-SLGNFGVHLPNLSQLKLNGSRLASLRDLGTSLGHLQVLWLARCGLSDLDGIGSFPALKELYVAYNNISDLSPLCLLEQLEVLDLEGNSVEDLGQVRYLQLCPRLSTLTLEGNLVCLRPGPGLSNKAPRGYNYRTEVRRLIPQLQVLDEAPAA--QTGLLAARTLTQDWLMVKEAI---REGGVLDSLLPGPGTGHGAPMKSLPEAQPRVPSLWPLSLLLPEDHLPEGLFPKDGTPEDDA-----SNLTHGTSHVLCGNPTKGLRERRHKS 343
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A6S7GZY5_PARCT (Leucine-rich repeat-containing 56-like isoform X1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GZY5_PARCT) HSP 1 Score: 72.8 bits (177), Expect = 2.520e-9 Identity = 51/151 (33.77%), Postives = 76/151 (50.33%), Query Frame = 1
Query: 13 EEICKGILTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNP 465
E++ + ++ L+ G L V LE+ +N+++ S+ + + L L L S + S RDLG L NL TL + G+ DLDGI L L+EL LA N +++V+PL +LQV +I +E L P L L L NP
Sbjct: 42 EQLMEDYVSPQKLKSLTGIHDLHEVVFLEMRVNTMQN-SLGNFGSMVQNLKQLKLTNSVISSVRDLGTSLNNLQTLWMAKCGLADLDGISSLCSLKELYLAYNDITEVSPLTMLDNLQVLDLEGNLVDDIAQVEFLVLCPELKRLTLEGNP 191
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Match: A0A1S3JVS6_LINUN (uncharacterized protein LOC106176571 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JVS6_LINUN) HSP 1 Score: 71.6 bits (174), Expect = 6.450e-9 Identity = 62/203 (30.54%), Postives = 97/203 (47.78%), Query Frame = 1
Query: 1 PLTMEE---ICKGILTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLLHTLVLDGSRLRSFRDLGADLRNLHTLSIEDSGVEDLDGIVVLSRLRELRLASNKVSDVTPLACHGSLQVXXXXXXXXGNIKDLEILGTIPLLYSLNLLQNP--LMTSLDKLLGGQD-RRVIHSLIPQLRILGKSSLSLLETNAVSD 591
P+ +EE + + L+ LR+ G L+ V LE+ +++ ET S+ LP L L L S + S RDLG+ L L ++ G+ DLDGI + L+EL LA N++SD++P L++ ++ +E L L L L NP + S +K + D R+ + IP L L L + T+ SD
Sbjct: 45 PIVLEETDLLLEEYLSPRKLRLLTGLDNLEEVKYLEMKVDTSET-SLGNFGQYLPSLTQLKLANSIIASVRDLGSCFSKLRVLWMQRCGLHDLDGISSMCNLKELYLAYNEISDISPCGMLDQLKILDLEGNNIDDVAQIEFLSLCSSLTHLTLDGNPVCITPSPEKAVPDYDFRQAVKKCIPNLMYLDDEPLVI--TSGKSD 244 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4474.11281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4474.11281.1 >prot_H-paniculata_contig4474.11281.1 ID=prot_H-paniculata_contig4474.11281.1|Name=mRNA_H-paniculata_contig4474.11281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1105bp MEEICKGILTEDMLRVAAGTRQLQTVTRLELAINSVETPSVEGVWASLPLback to top mRNA from alignment at H-paniculata_contig4474:9219..13824- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4474.11281.1 ID=mRNA_H-paniculata_contig4474.11281.1|Name=mRNA_H-paniculata_contig4474.11281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4606bp|location=Sequence derived from alignment at H-paniculata_contig4474:9219..13824- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4474:9219..13824- >mRNA_H-paniculata_contig4474.11281.1 ID=mRNA_H-paniculata_contig4474.11281.1|Name=mRNA_H-paniculata_contig4474.11281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6630bp|location=Sequence derived from alignment at H-paniculata_contig4474:9219..13824- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |