prot_H-paniculata_contig44731.11278.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig44731.11278.1
Unique Nameprot_H-paniculata_contig44731.11278.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length276
Homology
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.510e-51
Identity = 99/276 (35.87%), Postives = 164/276 (59.42%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKI 270
            +EV  + + GTL +SQ  +   +L+R+ +  ANP  TPG   + +T   ++ QLL     + +Q + GSL++L QCTR+D+S++V Q  R  + P Q H+ A K + RYL+G PD+PI Y + + +L  ++D+S+       RSTT  +FF+  GL+ + ++ Q + A +T EAEL AL+  A++ +Y+     E+G +   S  + SD+  AL +A+N+ +SSR+ HIA++F  L++  + H+  + H PS   LADI TK   +  FA +   I
Sbjct:   18 IEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQD-QLLGPEEKQRFQTITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 292          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.980e-51
Identity = 101/273 (37.00%), Postives = 165/273 (60.44%), Query Frame = 0
Query:    8 QTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            + GTL +SQ  +V ++LERF +  ANP  TPG   + +T   ++ Q+L     K YQ+M GS+++L QCTRFD+S++ +Q ++  S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+       RSTT  +FF+A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+  AL +A N+ +S R T++A++   +++ + R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:  102 EQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQR-TNVALRCFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 372          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 6.290e-51
Identity = 102/280 (36.43%), Postives = 170/280 (60.71%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            ++V  + + GTL +SQ  +V ++LERF +  ANP  TPG   + +T   ++ Q+L     K YQ+M GS+++L QCTRFD+S++ +Q ++  S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+       RSTT  +FF+A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+  AL +A N+ +S R+ H+A+++  +++ + R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:  422 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 700          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.790e-50
Identity = 105/276 (38.04%), Postives = 164/276 (59.42%), Query Frame = 0
Query:    6 NKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYC-------TRSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            ++  G + +SQHK+V+++L+++ +    P  TPG   +      EN+  L     K YQ +VGSL+FLT  TR++I ++V+   R M+ PT QH+V  KR+ RYL+G PD+P+ + R +  L  Y DAS+         RS+T  +F +A G+V  +S LQK+TA S+  AE+IA+AT A++ IYL G+  ELG    +  + SD+  A+  A NS +  RS  I+ ++  L+  + +   ++  V S +QLADILTK  ERV F +LR+ +   G
Sbjct:  429 SQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPE-IEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAASTLQKLTAQSSVHAEIIAMATAAREAIYLQGVLSELGFPCGNIPIHSDSTGAMSTAGNSMFRGRSKFISTRYWLLRQNVNKGNIVLKFVRSEEQLADILTKHLERVQFVKLRTLVQEHG 703          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5L5K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K4_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 5.230e-50
Identity = 100/280 (35.71%), Postives = 167/280 (59.64%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            ++V  + + GTL +SQ  +V ++LERF +  ANP  TPG   + +T   ++ Q+L     K Y++M GS+++L QCTRFD+S++ +Q ++  S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+       RSTT   FF+A GL+ + ++ Q  TA ST EAE+ AL+  A++ +Y+     EL  +   S  + +D+  AL +A N+ +S R+ H+A+++  +++   R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:   54 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYRSMTGSILYLAQCTRFDLSYAALQNSKACSNPAQVNMTAAKHVLRYLRGNPFLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYPFFLAGGLISYGAKTQTRTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINNDSTGALTVAGNAMHSQRTKHVALRYFFIRELALRGQITLHHRPSEHQLADIATKNLPKHRFASIIQQINDFS 332          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 8.180e-50
Identity = 101/280 (36.07%), Postives = 169/280 (60.36%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            ++V  + + GTL +SQ  +V ++LERF +  ANP  TPG   + +T   ++ Q+L     K YQ+M GS+++L QCTRFD+S++ +Q ++  S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+       RSTT  +FF+A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+  AL +A N+ +S R+ H+ +++  +++ + R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:  578 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 856          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5K4S5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S5_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 8.740e-50
Identity = 102/297 (34.34%), Postives = 170/297 (57.24%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPD-----------------VPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            ++V  + + GTL +SQ  +V ++LERF +  ANP  TPG   + +T   ++ Q+L     K YQ+M GS+++L QCTRFD+S++ +Q ++  S P Q ++ A K + RYL+G+P                  +PI Y R + +L  ++D+S+       RSTT  +FF+A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+  AL +A N+ +S R+ H+A+++  +++ + R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:   37 IDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVXXXXXXXXXXXXXXXSVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 332          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.070e-49
Identity = 100/280 (35.71%), Postives = 168/280 (60.00%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            ++V  + + GTL +SQ  +V + LERF +  ANP  T G   + +T   ++ Q+L     K YQ+M GS+++L QCT+FD+S++ +Q ++  S P Q ++ A K + RYL+G+P +PI Y R + +L  ++D+S+       RSTT  +FF+A GL+ + ++ Q +TA ST EAE+ AL+  A++ +Y+     EL  +   S  + SD+  AL +A N+ +S R+ H+A+++  +++ + R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:  214 IDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 492          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.200e-48
Identity = 100/276 (36.23%), Postives = 165/276 (59.78%), Query Frame = 0
Query:    1 MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKI 270
            +EV  + + GTL +SQ  +   +L+R+ +  ANP  TPG   + +T   ++ QLL     + +QA+ GSL++L QCTR+D+S++V Q  R  + P Q H+ A K + RYL+G PD+PI Y + + +L  ++D+S+       RSTT  +FF+  GL+ + ++ Q + A +T EAEL AL+  A++ +Y+     E+G +   S  + SD+  AL +A+N+ +SSR+ HIA++F  L++  + H+  + H PS   LADI TK   +  FA +   I
Sbjct:  455 IEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQD-QLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLI 729          
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 6.280e-46
Identity = 101/281 (35.94%), Postives = 166/281 (59.07%), Query Frame = 0
Query:    8 QTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSENSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLG-------YSDASYCT-----RSTTETMFFVANGLVHFSSRLQKITATSTTEAELIALATCAKQG-IYLLGICRELGLQ-LTSCEVRSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQLADILTKLCERVVFAQLRSKILTFG 274
            + GTL +SQ  +V ++LERF +  ANP  TPG   + +T   ++ Q+L     K YQ+M GS+++L QCTRFD+S++ +Q ++  S P Q ++ A K + RYL+G+P +PI Y R + +L         ++D+S+       RSTT  +FF+A GL+ + ++ Q +TA ST EAE+ AL+  A++  +Y+     EL  +   S  + SD+  AL +A N+ +S R+ H+A+++  +++ + R Q  + H PS  QLADI TK   +  FA +  +I  F 
Sbjct:  808 EQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQD-QILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 1087          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig44731.11278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC04_9PHAE1.510e-5135.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUJ3_9PHAE1.980e-5137.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE6.290e-5136.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J897_9PHAE1.790e-5038.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5K4_9PHAE5.230e-5035.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE92_9PHAE8.180e-5036.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S5_9PHAE8.740e-5034.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE1.070e-4935.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE2.200e-4836.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJR8_9PHAE6.280e-4635.94Integrase catalytic domain-containing protein n=11... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 56..240
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 56..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig44731contigH-paniculata_contig44731:689..1516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig44731.11278.1mRNA_H-paniculata_contig44731.11278.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig44731 27..1516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig44731.11278.1 ID=prot_H-paniculata_contig44731.11278.1|Name=mRNA_H-paniculata_contig44731.11278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp
MEVLCNKQTGTLQLSQHKHVLSVLERFNVSSANPTKTPGVKTDSTTTTSE
NSQLLDAAATKEYQAMVGSLIFLTQCTRFDISFSVIQAARYMSAPTQQHL
VAVKRIFRYLQGHPDVPITYSRCEPKLLGYSDASYCTRSTTETMFFVANG
LVHFSSRLQKITATSTTEAELIALATCAKQGIYLLGICRELGLQLTSCEV
RSDNRVALQLAANSNYSSRSTHIAVKFAALKDWIRRHQFIIDHVPSTDQL
ADILTKLCERVVFAQLRSKILTFGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like