prot_H-paniculata_contig4473.11277.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4473.11277.1
Unique Nameprot_H-paniculata_contig4473.11277.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length515
Homology
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 3.770e-18
Identity = 51/86 (59.30%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   74 KMRRSCDYCVRMKRACDGKTPCELCTRRNKDCTRSVKKKSGPAKGTKYAARRARS--QEDSRQHTLLSSPATPLDRLGGNVGGGGG 157
            ++R+SCDYCVR+KRACDGK PC LC RR+K CTRS +KKSGPAKGTKYA RR RS   E + +      P  P +  GG   GGGG
Sbjct:    9 ELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGAGGPPLPHEFQGGGTSGGGG 94          
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 5.050e-18
Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   74 KMRRSCDYCVRMKRACDGKTPCELCTRRNKDCTRSVKKKSGPAKGTKYAARRARS--QEDSRQHTLLSSPATPLDRLGGNVGGGGG 157
            ++R+SCDYCVR+KRACDGK PC LC RR+K CTRS +KKSGPAKGTKYA RR RS   E + + +    P  P +  GG   GGGG
Sbjct:   17 ELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGARGPLLPHEFPGGGTRGGGG 102          
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.190e-15
Identity = 40/59 (67.80%), Postives = 46/59 (77.97%), Query Frame = 0
Query:   69 DSELPKMRRSCDYCVRMKRACDGKTPCELCTRRNKDCTRSVKKKSGPAKGTKYAARRAR 127
            D E   +R+SCDYCVRMKR C G TPC LC RRNK+C RS+KK+SGPAKGTKY  R+ R
Sbjct:   17 DQEHQALRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 75          
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 8.180e-15
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0
Query:   67 EEDSELPKMRRSCDYCVRMKRACDGKTPCELCTRRNKDCTRSVKKKSGPAKGTKYAARRAR 127
            ++D     +R+SCD CVR+KRACDGK PC LC RR + CTRSVK+KSGPAKGTKY  RR+R
Sbjct:   54 QQDDGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114          
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.690e-14
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0
Query:   75 MRRSCDYCVRMKRACDGKTPCELCTRRNKDCTRSVKKKSGPAKGTKYAARRAR 127
            +R+SCD CVR+KRACDG++PC+LC RR + CTRSVK+KSGPAKGTKY  RR R
Sbjct:   34 LRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86          
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.560e-6
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 0
Query:   85 MKRACDGKTPCELCTRRNKDCTRSVKKKSGPAKGTKYAARR 125
            MKRACDG +PC LC+RR K C R +++KSGPAKG KYA RR
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRR 41          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4473.11277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L009_9PHAE3.770e-1859.30Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI5.050e-1859.30Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LKM5_ECTSI2.190e-1567.80Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
D8LPZ9_ECTSI8.180e-1565.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE1.690e-1471.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JII0_9PHAE3.560e-668.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 77..112
e-value: 2.7E-5
score: 24.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 78..107
score: 8.962
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 76..146
e-value: 1.2E-5
score: 27.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 72..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4473contigH-paniculata_contig4473:4691..12127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4473.11277.1mRNA_H-paniculata_contig4473.11277.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4473 4691..12477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4473.11277.1 ID=prot_H-paniculata_contig4473.11277.1|Name=mRNA_H-paniculata_contig4473.11277.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=515bp
MMSDEQPRTRRAKSSRLSAGRAGRNFTQGGGDSSERSLTGSGEYRNQHRA
TSSPAPSGTSSNNTGGEEDSELPKMRRSCDYCVRMKRACDGKTPCELCTR
RNKDCTRSVKKKSGPAKGTKYAARRARSQEDSRQHTLLSSPATPLDRLGG
NVGGGGGSSSVGSLTPGALLVDRPTISRPASAGDRRTDPPSVGRGGGGHG
VSSGSMLTSVAVPSSFMSPDGVGGAAAGLRESVEGGGAVGLVGTGSASSQ
HGSGGVVGGDSESQQLIRTFPGVLQDPSIWDEPSPEELRIVGDMESNPLS
RFMGQGGGRGQDMDPQYTDAMARGVTRAWDDGSGVHGGGGGRLEFPNAAG
FDARAVPTFEAGASSVSREMRYDACSTSAAVGGPSGDRPPQFRPIPRDGT
GGDDQPHYFPPAFRRTQPQQQQQRDLSSTSSPMSALSIDDVFRSGGGGSG
SGSGSGVGAEGANHYLQPLSRHEGGGANGGRESIGERDIGVRLGYAAEGG
RGASGEGGSGGFSFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf