prot_H-paniculata_contig4471.11276.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4471.11276.1
Unique Nameprot_H-paniculata_contig4471.11276.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: D8LNJ2_ECTSI (Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 5.160e-66
Identity = 105/147 (71.43%), Postives = 121/147 (82.31%), Query Frame = 0
Query:   40 LGDVISEVARRPATSEEEDDDEDILPMNAGLEPMAPGPIVPKPIKGMDADDVPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLLPLDYETYFQ 186
            L D++SE+A R       DD+  ++P  AG+ PMAPGPI P PI GMD DD+PGKIVL PE L+EQQKGLEKIAQQLRRERLD+EA D + FGFCP AELWNGRSAMFGITVGMLTE WTGQS+PQQ+ET AQ++GLLPLDY+TYFQ
Sbjct:   99 LDDLVSEMAGRS------DDEPIVIPRGAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ 239          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.550e-33
Identity = 66/103 (64.08%), Postives = 84/103 (81.55%), Query Frame = 0
Query:   84 KGMDADD-VPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLLPLDYETYF 185
            +G+ ADD VPGKIV+D  TL++QQ  LEK A+QLRR+RLD+EA +  + G+ P AE+ NGR+AMF I VG+LTE WTGQS+PQQVETMA ++GLLPLDYE+ F
Sbjct:   65 EGIIADDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLLPLDYESMF 167          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: Q98RP5_GUITH (High light inducible protein n=1 Tax=Guillardia theta TaxID=55529 RepID=Q98RP5_GUITH)

HSP 1 Score: 91.3 bits (225), Expect = 2.340e-20
Identity = 43/91 (47.25%), Postives = 68/91 (74.73%), Query Frame = 0
Query:   87 DADDVPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            D +++PGKIVL  E +S ++K L+ +A++ + ERL++E ++N +FGF   +E+ NGR AMF IT G+LTELWT QSL  Q+E M +++G++
Sbjct:   36 DDNNIPGKIVLSKEEISNREKKLKILAEKWKNERLEKEILENKIFGFSKYSEIINGRIAMFFITTGLLTELWTKQSLISQIEIMLRVLGII 126          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 6.130e-18
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   91 VPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            VPG+  L    L+EQ++ L  +A++ +  RL +EA    VFGFC  AE+ NGR+AMF    GMLTE WTGQ++PQQ+E + +I+G++
Sbjct:   56 VPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: A9BKE1_HEMAN (Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKE1_HEMAN)

HSP 1 Score: 83.6 bits (205), Expect = 2.500e-17
Identity = 36/87 (41.38%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   91 VPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            +PGKI+L    +SE++  L+ ++++ ++ER+ +E  D   FGF   +E+ NGR AMF I  G+LTE+WTGQ++P Q+ET+ + +G++
Sbjct:   45 IPGKIILSKTVISERELKLKSLSEKWKKERIAKENFDKKAFGFTKNSEILNGRIAMFFIITGLLTEIWTGQTIPDQIETIIRTLGII 131          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V653_CYAM1)

HSP 1 Score: 85.1 bits (209), Expect = 3.680e-17
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   91 VPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            VPG+  L    L+EQ++ L  +A++ +  RL +EA    VFGFC  AE+ NGR+AMF    GMLTE WTGQ++PQQ+E + +I+G++
Sbjct:  119 VPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: A0A7J7IMA7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA7_9RHOD)

HSP 1 Score: 84.7 bits (208), Expect = 7.220e-17
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 0
Query:   92 PGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            PG+  L    L+EQ++ +  +A++ + ER+ +EA    VFGFC  AE+ NGR+AMF    GMLTE WTGQ++PQQ+E + +I+G L
Sbjct:  137 PGRYKLSAAELAEQRRAIRAVAERYKAERIAREAEARRVFGFCRNAEIINGRTAMFFFATGMLTEYWTGQTMPQQIELLLRILGFL 222          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: A0A2V3IG60_9FLOR (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG60_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 1.280e-16
Identity = 41/87 (47.13%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   91 VPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            VPGKI LD  T+++Q+  LE+ +++LR++RL++E     +FG+ P AE  NGR AMF +  G+LTE WTG +LP+QVE M + +G++
Sbjct:   84 VPGKIQLDELTIAKQRTVLEEYSRELRQKRLEEEREAARIFGWVPYAETLNGRLAMFFLVTGLLTEYWTGYTLPEQVELMLRTLGII 170          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: A0A7S2P2S9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2S9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.120e-16
Identity = 37/92 (40.22%), Postives = 64/92 (69.57%), Query Frame = 0
Query:   89 DDVPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLLPLD 180
            ++VPGK+V++   L++Q   L ++ ++ R+ER+ +E  D  + G+ P AE++NGR AMF + VG+LTE WTG ++P Q+E M ++ G + +D
Sbjct:   64 ENVPGKVVMNEIDLAKQVSALNQLEEKWRKERVYKEYEDKALLGWTPQAEMYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIDVD 155          
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Match: Q15GC1_RHDSA (High light inducible protein (Fragment) n=1 Tax=Rhodomonas salina TaxID=52970 RepID=Q15GC1_RHDSA)

HSP 1 Score: 78.6 bits (192), Expect = 9.270e-16
Identity = 37/89 (41.57%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   89 DDVPGKIVLDPETLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGITVGMLTELWTGQSLPQQVETMAQIIGLL 177
            + +PGKI L    + E++K L  ++++ ++ER+ +E  +  +FGF   +E+ NGR AMF +T G+LTELWT QS+  Q++TM + +GLL
Sbjct:   11 EKIPGKIKLSEIEIVEREKKLRALSEKWKKERITKEEFERKLFGFTKNSEILNGRMAMFFLTTGLLTELWTKQSIITQIDTMLRTLGLL 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4471.11276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNJ2_ECTSI5.160e-6671.43Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_EC... [more]
A0A836CEG8_9STRA1.550e-3364.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
Q98RP5_GUITH2.340e-2047.25High light inducible protein n=1 Tax=Guillardia th... [more]
A0A7V5I693_9BACT6.130e-1847.13Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A9BKE1_HEMAN2.500e-1741.38Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 Re... [more]
M1V653_CYAM13.680e-1747.13Similar to high light inducible protein n=1 Tax=Cy... [more]
A0A7J7IMA7_9RHOD7.220e-1746.51Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A2V3IG60_9FLOR1.280e-1647.13Light-harvesting complex-like protein OHP2, chloro... [more]
A0A7S2P2S9_9STRA7.120e-1640.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
Q15GC1_RHDSA9.270e-1641.57High light inducible protein (Fragment) n=1 Tax=Rh... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037492Light-harvesting complex-like protein OHP2PANTHERPTHR33401FAMILY NOT NAMEDcoord: 47..171
NoneNo IPR availablePANTHERPTHR33401:SF1LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 47..171
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 126..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4471contigH-paniculata_contig4471:8819..13372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4471.11276.1mRNA_H-paniculata_contig4471.11276.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4471 6472..14049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4471.11276.1 ID=prot_H-paniculata_contig4471.11276.1|Name=mRNA_H-paniculata_contig4471.11276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MQSEGGELEEALGQLEVTPEASARDVALPRGGAGAMGGVLGDVISEVARR
PATSEEEDDDEDILPMNAGLEPMAPGPIVPKPIKGMDADDVPGKIVLDPE
TLSEQQKGLEKIAQQLRRERLDQEAIDNVVFGFCPTAELWNGRSAMFGIT
VGMLTELWTGQSLPQQVETMAQIIGLLPLDYETYFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037492OHP2