prot_H-paniculata_contig4470.11272.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4470.11272.1
Unique Nameprot_H-paniculata_contig4470.11272.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length554
Homology
BLAST of mRNA_H-paniculata_contig4470.11272.1 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 2.500e-64
Identity = 209/537 (38.92%), Postives = 246/537 (45.81%), Query Frame = 0
Query:    4 PSAAQLSIASKVASSRFCDLLDHLRKGSRIHYGQERGDEGDEDTHQAQQRLEMCVRLVVAQPAEFLRRFGHTLTLKQLDSFVPSPDPDVGKHVARLQALMLEQRHRFDPTTIPTSXXXXXXXXTIMRTSNKDYDPGDVHMGIAGEPAXXXXXXXXXXXXXQSSKHFSEQRPSYPPASARARNRRYRRLQQLAQGGVWFSDEAMKERDPWLWHEHVGRLEGGERPAPRAAAEEVPGSTTVRTYLQESLGFLSEQPKDGDWLAG--SSSAAGGGIGVGLGGKGPSLGMAFLSGMCGAARPRPEFEPESDRGEGVVDGSQGCFGESMVIMDMDGIPTRERPGDTPKVLPGEDIDLSNVPDETRSPDPAQATPIRGG--EGTKLYGADATDIVTASVEACTIACTTTQGAGQHDDDADLNSSEGAPPSNLNFTAGRVHFVEGGREKNGRLYVSGLDEPQQDEKEADEGGDAEDSSSWGRPG------------------GREEVARILSERFLAGGEEGVDYRAVDDDERLDDLEQLARDE 518
            PS AQL +A KVA+S FC++L      S                    +  E C++L++ QP EFL RFGH LT   L+S +PS DP V  HVARL+ LML Q            XXXXXXXX                        XXXXXXXXXXXXX                 AR RNRRYRRLQQLA+GGVWFSDEAMKERDPWLW E+VG+  G E+PAP+ A EEVPGST+V TYLQESLGFLS++  +G W  G  +S A  G           SLGMAFLSG+C  A  R                                            V  GE +D S+VP+   S     A PI  G  +G + +  +        V+A   A T   GA    DD      +G           RV F                     DE  +D GG                              GREEVARILSERFLAG E+GVDYR+VD DERLDDL+QL+RDE
Sbjct:   49 PSPAQLEVADKVAASPFCNVLPPATTSSSA------------------EAAEACLKLLLHQPGEFLSRFGHILTPGDLESLLPSQDPAVALHVARLKTLMLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWPTGLPTSGAGAGXXXXXXXXXXTSLGMAFLSGVCADAGARD-------------------------------------------VAAGETVDSSDVPEAASSQAEVTAVPIASGMPDGRERHACE------DDVDARAAAVTAAVGAIGLQDDGKKADVDGR----------RVRFS--------------------DEMGSDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDE 475          
BLAST of mRNA_H-paniculata_contig4470.11272.1 vs. uniprot
Match: A0A850XI52_PIACA (CCD97 protein (Fragment) n=1 Tax=Piaya cayana TaxID=33601 RepID=A0A850XI52_PIACA)

HSP 1 Score: 57.4 bits (137), Expect = 3.710e-6
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:  173 RPSYPPASARARNRRYRRLQQLAQGGVWFSDEAMKERDPWLWHEHVGRLEGGE 225
            RP   PA  R RNRRY  L++L Q G +FS+EAM+ R+P L+H ++GR  G E
Sbjct:   57 RPRRSPARTRLRNRRYAALRRLIQEGDYFSEEAMRAREPLLYHHYIGRYRGAE 109          
BLAST of mRNA_H-paniculata_contig4470.11272.1 vs. uniprot
Match: A0A1D1YCT0_9ARAE (Coiled-coil domain-containing protein 97 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YCT0_9ARAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.330e-5
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  180 SARARNRRYRRLQQLAQGGVWFSDEAMKERDPWLWHEHVGRLE-----GGERPAPR 230
            SA  +NRR   L+QL QGGV+FS+EAM+ER+P+L HE+VGR +     G  RP  R
Sbjct:  130 SATVKNRRRAYLEQLVQGGVYFSEEAMREREPYLHHEYVGRFQDPGGRGMSRPGER 185          
BLAST of mRNA_H-paniculata_contig4470.11272.1 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5)

HSP 1 Score: 57.0 bits (136), Expect = 3.230e-5
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:  184 RNRRYRRLQQLAQGGVWFSDEAMKERDPWLWHEHVGR 220
            RNRRYRR+QQL Q G +FS+EAMKER PWL+ + VGR
Sbjct:   92 RNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGR 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4470.11272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FM87_ECTSI2.500e-6438.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A850XI52_PIACA3.710e-650.94CCD97 protein (Fragment) n=1 Tax=Piaya cayana TaxI... [more]
A0A1D1YCT0_9ARAE1.330e-553.57Coiled-coil domain-containing protein 97 (Fragment... [more]
F2TWH5_SALR53.230e-570.27DUF2052 domain-containing protein n=1 Tax=Salpingo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040233Domain of unknown function DUF2052PFAMPF09747DUF2052coord: 453..518
e-value: 6.7E-10
score: 39.4
coord: 185..228
e-value: 1.8E-9
score: 38.0
IPR018613Ccdc97-likePANTHERPTHR31840FAMILY NOT NAMEDcoord: 456..518
coord: 22..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4470contigH-paniculata_contig4470:5707..15405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4470.11272.1mRNA_H-paniculata_contig4470.11272.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4470 5136..15442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4470.11272.1 ID=prot_H-paniculata_contig4470.11272.1|Name=mRNA_H-paniculata_contig4470.11272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=554bp
MVHPSAAQLSIASKVASSRFCDLLDHLRKGSRIHYGQERGDEGDEDTHQA
QQRLEMCVRLVVAQPAEFLRRFGHTLTLKQLDSFVPSPDPDVGKHVARLQ
ALMLEQRHRFDPTTIPTSSPTPTPTTTIMRTSNKDYDPGDVHMGIAGEPA
GDPAGYPPNRPAEQSSKHFSEQRPSYPPASARARNRRYRRLQQLAQGGVW
FSDEAMKERDPWLWHEHVGRLEGGERPAPRAAAEEVPGSTTVRTYLQESL
GFLSEQPKDGDWLAGSSSAAGGGIGVGLGGKGPSLGMAFLSGMCGAARPR
PEFEPESDRGEGVVDGSQGCFGESMVIMDMDGIPTRERPGDTPKVLPGED
IDLSNVPDETRSPDPAQATPIRGGEGTKLYGADATDIVTASVEACTIACT
TTQGAGQHDDDADLNSSEGAPPSNLNFTAGRVHFVEGGREKNGRLYVSGL
DEPQQDEKEADEGGDAEDSSSWGRPGGREEVARILSERFLAGGEEGVDYR
AVDDDERLDDLEQLARDETIGFEARGTKTTAHIVRSTVSRATDAHAFVPW
AGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040233DUF2052
IPR018613Ccdc97-like