prot_H-paniculata_contig4470.11270.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4470.11270.1
Unique Nameprot_H-paniculata_contig4470.11270.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: D7FM89_ECTSI (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM89_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.470e-16
Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    3 ELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKV 51
            ELDK+  +D+ DKLVVVDYSTTWCGPCK+ILP FE+L+ +Y DA+F+KV
Sbjct:   25 ELDKLT-SDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKV 72          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A6H5K2L8_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L8_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.700e-16
Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    3 ELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKV 51
            ELDK+  +D+ DKLVVVDYSTTWCGPCK+ILP FE+L+ +Y DA+F+KV
Sbjct:   64 ELDKLT-SDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKV 111          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A7S1ZG46_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG46_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 1.840e-14
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 DELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKV 51
            D  D  IK+ + D LVVVDYSTTWCGPCK+I P FEE S KY DA+FLKV
Sbjct:   51 DAFDNTIKS-AGDALVVVDYSTTWCGPCKVIAPKFEEFSEKYSDAVFLKV 99          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A8J6BJY0_ELECQ (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6BJY0_ELECQ)

HSP 1 Score: 70.5 bits (171), Expect = 3.390e-14
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    6 KIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKVE 52
            K   +D+ DKLVVVD++ TWCGPCK+I P FEELS KY D +F+KV+
Sbjct:   80 KATLSDAGDKLVVVDFTATWCGPCKMIAPFFEELSKKYPDVVFIKVD 126          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A7S0Z4I3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z4I3_9CRYP)

HSP 1 Score: 70.9 bits (172), Expect = 3.930e-14
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    3 ELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLK 50
            ELD ++K+ S DKLVV+DYSTTWCGPCK++ P +E LS  Y DA+FLK
Sbjct:   56 ELDDVVKS-SGDKLVVIDYSTTWCGPCKIVAPKYEALSDVYTDAVFLK 102          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A7S1MTD0_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MTD0_HEMAN)

HSP 1 Score: 70.9 bits (172), Expect = 4.190e-14
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    3 ELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLK 50
            ELD ++K+ S DKLVV+DYSTTWCGPCK++ P +E LS  Y DA+FLK
Sbjct:   59 ELDDVVKS-SGDKLVVIDYSTTWCGPCKIVAPKYEALSEVYTDAVFLK 105          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A7S2V6I4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6I4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.060e-14
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    3 ELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKV 51
            + DK +   + D LVVVD+STTWCGPCK+I P FEE+S +Y D IFLKV
Sbjct:   67 DFDKAVNDAAGDSLVVVDFSTTWCGPCKIIAPKFEEMSERYTDVIFLKV 115          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A7S4NJD6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NJD6_GUITH)

HSP 1 Score: 70.9 bits (172), Expect = 5.270e-14
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    3 ELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLK 50
            ELD+ I+    + LV++DYSTTWCGPCK+I P ++E+S KY+DAIFLK
Sbjct:   69 ELDQAIEAAGENTLVIIDYSTTWCGPCKVIAPKYDEMSDKYKDAIFLK 116          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A7S1FYF1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYF1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.060e-13
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0
Query:   14 DKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKVE 52
            D LVV+DYSTTWCGPCK+I P ++ELS KY DA+FLKV+
Sbjct:   68 DALVVIDYSTTWCGPCKVIAPKYDELSDKYPDAVFLKVK 106          
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Match: A0A6V2AAC3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AAC3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.100e-13
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    3 ELDKIIKTDST-----DKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLKV 51
            ++D   K D T     D LVVVDYSTTWCGPCK+I P F+ELS +Y DA+F+KV
Sbjct:   47 DIDSEAKFDKTIESAGDSLVVVDYSTTWCGPCKVIAPKFDELSEQYSDAVFVKV 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4470.11270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM89_ECTSI1.470e-1669.39Flagellar outer arm dynein 14 kDa light chain LC5 ... [more]
A0A6H5K2L8_9PHAE3.700e-1669.39Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A7S1ZG46_TRICV1.840e-1468.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A8J6BJY0_ELECQ3.390e-1461.70Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S0Z4I3_9CRYP3.930e-1464.58Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S1MTD0_HEMAN4.190e-1464.58Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S2V6I4_9STRA5.060e-1461.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4NJD6_GUITH5.270e-1460.42Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1FYF1_9STRA1.060e-1371.79Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6V2AAC3_9STRA1.100e-1359.26Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 9..52
e-value: 6.7E-11
score: 42.1
NoneNo IPR availableGENE3D3.40.30.10coord: 1..52
e-value: 1.3E-13
score: 52.7
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 3..52
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 3..52
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 18..36
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4470contigH-paniculata_contig4470:1260..1418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4470.11270.1mRNA_H-paniculata_contig4470.11270.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4470 1251..1418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4470.11270.1 ID=prot_H-paniculata_contig4470.11270.1|Name=mRNA_H-paniculata_contig4470.11270.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MDELDKIIKTDSTDKLVVVDYSTTWCGPCKLILPMFEELSIKYEDAIFLK
VE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf