prot_H-paniculata_contig4469.11268.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4469.11268.1
Unique Nameprot_H-paniculata_contig4469.11268.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length814
Homology
BLAST of mRNA_H-paniculata_contig4469.11268.1 vs. uniprot
Match: A0A6H5K372_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.950e-57
Identity = 244/795 (30.69%), Postives = 314/795 (39.50%), Query Frame = 0
Query:   31 MAEALAAAGMAQTVYRRGRSGEARGVAMGEVTCVVVATGTAVFVLDGVYVKKDTLFSEAPRPRLLMVAPLAWLEGTTIGFRLQKLELHFNRGDVS----GVMEAGGR---ASLVLLTRDRSRTFNILKTLEPLASKARRSAGLPATAVENRDGETLEAIAWALPCHSIASTQTLAFRSSDPKSTPFLKSKPFVKIQPA-SIAGDDAASGSSDDVSASTTSQRSETKPERCVLRPVHIVGGXXXXXXXXXXXXXXXXXACGDGTARGNDSTQGNEVLLVDTNTSGGGGLRGDTMDSGRAIIDGAEREHPRVIGIVPDEGVPAAAAXXXASSVPKCDQENSKSTSTDNPARPRESVGIFRKLGNWADGFRMSGSTEREGGXXXXXXXXXXXXXXXGSVSTVPDQITSDGSLVDRCGGVEPDGIAADRVDDSRRELPPKNERSSGSSPANNRAMGNVRLALLSNDDVLCAPGKKAQGEGSRTQPTAEQMRSSPPQDEERGEFAPEPAEEQASKPLMEPLGGHGRDMAVSERSAVNNDAIHSSPVSPAPAAASSPQNSLLTVLMSAFDGGDQXXXXXXXXXXXXXXTGKSECG--DGAVVVFQLLMQRWELRPWVAAPRTLVATKEQVALMDEDHSNMQQHPPTAAAPPATIHGTLMSQPSFADTSGSVGGVRDSGWSLTTPSVPVLMPAGFPASQPTAWGSIESTSSGEVSDVVRLEQGLGMMTCVDFADLADVMDVRQEEEAPEQVTLELKGN---DGRRQWRLQCRTRGSAEFVALTIRRLSAERLAQRRRNF-WW 811
            M  ALAA GM Q V+RRG  GEA G  MGEV CVVVAT +++F +DG + K  T FS APRPR+LMV PLA LE TTIGFRLQKLE+HF+   V     G  + G R    S+ LLTRD+SRTFN+L+TLEPL++KARR   LPA  VENRD  TLEAIA ALP  +IA  +    RS   +++P           PA S AG+ A +G S+       +QRS TK E       H+ G                                                                                                                ES G+F +LG W D    + + + +G                                  R  GV                                 A+G+V       D      G++                     D++ G  A                 G G   A       + D++       AP + S     LL+  +S+ +                  T  S  G  +G VVVFQLL+QRWELRPWV  PRTLVATKE++ALMDEDHS +     +     +   G               G + + G  L+                   W ++     G  S++         M+CVD  DL DV+DVRQE+ APEQV ++LKG    + RRQWRLQCRTRGSAE VA  + RLS ER+ QRR++  WW
Sbjct: 1388 MENALAATGMVQQVHRRGVDGEAEGYTMGEVACVVVATESSIFFIDGGFAKDGTQFSAAPRPRVLMVLPLACLERTTIGFRLQKLEMHFDPSSVGEEEEGWSDDGQRDETVSVALLTRDKSRTFNLLQTLEPLSTKARRMMSLPAVVVENRDEATLEAIARALPPSTIAPARHSTSRSQIDQASP-----------PAFSPAGETAPAGESE------AAQRS-TKIEP------HLPG---------------------------------------------------------------------------------------------------------------HESAGLFGRLGKWGDDSGPAATGDEDG----------------------------------RGSGV---------------------------------ALGSVHGCGAVTDAGNGQEGREG--------------------DDDNGVGA---------------WAGEGAASAAETHGTASWDSVG------APPSLSGTATPLLSPTVSSSN---------------VVETPPSVGGGHEGTVVVFQLLVQRWELRPWVVVPRTLVATKEKLALMDEDHSRVSSSSSSGKNSNSVFGGLA-------------GEICEDGRRLS-------------------W-TVADGGDGGGSELKE-------MSCVDSVDLGDVIDVRQEKSAPEQVVVDLKGERAFNPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQRRQSSSWW 1884          
BLAST of mRNA_H-paniculata_contig4469.11268.1 vs. uniprot
Match: D8LMA8_ECTSI (Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 5.670e-42
Identity = 107/187 (57.22%), Postives = 128/187 (68.45%), Query Frame = 0
Query:   31 MAEALAAAGMAQTVYRRGRSGEARGVAMGEVTCVVVATGTAVFVLDGVYVKKDTLFSEAPRPRLLMVAPLAWLEGTTIGFRLQKLELHFNRGDVS----GVMEAGGR-----ASLVLLTRDRSRTFNILKTLEPLASKARRSAGLPATAVENRDGETLEAIAWALPCHSIASTQTLAFRSSDPKSTP 208
            M  ALAA GM Q V+RRG  GEA G  MGEV CVVVAT +++F +DG + K  T FS APRPR+LMV PLA LE TTIGFRLQKLE+HF+   V     G  + G R      S+ LLTRD+SRTFN+L+TLEPL++KARR   LPA  VENRD  TLEAIA ALP  +IAS +    RS   +++P
Sbjct: 1435 MENALAATGMVQQVHRRGVDGEAEGYTMGEVACVVVATESSIFFVDGGFAKDGTQFSAAPRPRVLMVLPLACLERTTIGFRLQKLEMHFDPSAVGEQEEGWSDDGHRDETVSVSVALLTRDKSRTFNLLQTLEPLSTKARRRISLPAMVVENRDEATLEAIARALPPSTIASARHSTSRSQLGQASP 1621          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4469.11268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K372_9PHAE2.950e-5730.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMA8_ECTSI5.670e-4257.22Nischarin/ IRAS/ imidazoline receptor n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4469contigH-paniculata_contig4469:249..12975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4469.11268.1mRNA_H-paniculata_contig4469.11268.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4469 190..13484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4469.11268.1 ID=prot_H-paniculata_contig4469.11268.1|Name=mRNA_H-paniculata_contig4469.11268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=814bp
MVDKRAAATVAAAEVVRENRVPSMTARDRHMAEALAAAGMAQTVYRRGRS
GEARGVAMGEVTCVVVATGTAVFVLDGVYVKKDTLFSEAPRPRLLMVAPL
AWLEGTTIGFRLQKLELHFNRGDVSGVMEAGGRASLVLLTRDRSRTFNIL
KTLEPLASKARRSAGLPATAVENRDGETLEAIAWALPCHSIASTQTLAFR
SSDPKSTPFLKSKPFVKIQPASIAGDDAASGSSDDVSASTTSQRSETKPE
RCVLRPVHIVGGAAAAVIDPDPPPPPPSSACGDGTARGNDSTQGNEVLLV
DTNTSGGGGLRGDTMDSGRAIIDGAEREHPRVIGIVPDEGVPAAAAAAAA
SSVPKCDQENSKSTSTDNPARPRESVGIFRKLGNWADGFRMSGSTEREGG
GSDSGSGSGGGGGGRGSVSTVPDQITSDGSLVDRCGGVEPDGIAADRVDD
SRRELPPKNERSSGSSPANNRAMGNVRLALLSNDDVLCAPGKKAQGEGSR
TQPTAEQMRSSPPQDEERGEFAPEPAEEQASKPLMEPLGGHGRDMAVSER
SAVNNDAIHSSPVSPAPAAASSPQNSLLTVLMSAFDGGDQGSGGSGNGGG
GCGNTGKSECGDGAVVVFQLLMQRWELRPWVAAPRTLVATKEQVALMDED
HSNMQQHPPTAAAPPATIHGTLMSQPSFADTSGSVGGVRDSGWSLTTPSV
PVLMPAGFPASQPTAWGSIESTSSGEVSDVVRLEQGLGMMTCVDFADLAD
VMDVRQEEEAPEQVTLELKGNDGRRQWRLQCRTRGSAEFVALTIRRLSAE
RLAQRRRNFWWHR*
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